GenBank-Updates@genbank.bio.net (03/06/91)
LOCUS WMVCOAT 1157 bp ss-RNA VRL 06-MAR-1991
DEFINITION Watermelon mosaic virus 2 coat protein gene.
ACCESSION D00535
KEYWORDS coat protein.
SOURCE Watermelon mosaic virus 2, cDNA to genomic RNA.
ORGANISM Watermelon mosaic virus 2
Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses;
Potyvirus.
REFERENCE 1 (bases 43 to 1157)
AUTHORS Frenkel,M.J., Ward,C.W. and Shukla,D.D.
TITLE The use of 3' non-coding nucleotide sequences in the taxonomy of
potyviruses: Application to watermelon mosaic virus 2 and soybean
mosaic virus-N
JOURNAL J. Gen. Virol. 70, 2775-2783 (1989)
STANDARD full staff_entry
REFERENCE 2 (bases 1 to 42)
AUTHORS Frenkel,M.J.
JOURNAL Unpublished (1990)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Maurice J. Frenkel
CSIRO, Division of Biotechnology
343 Royal Parade, Parkville
Victoria 3052
Australia
Phone: 03-342-4200
Fax: 03-347-5481
The sequence is identical to that determined by direct protein
sequencing (Yu et al., 1989).
FEATURES Location/Qualifiers
CDS <1..909
/note="coat protein precursor"
sig_peptide <1..63
/note="coat protein signal peptide"
mat_peptide 64..906
/note="coat protein"
misc_feature 1157..1157
/note="poly(A) site"
BASE COUNT 388 a 189 c 264 g 316 t
ORIGIN 1157 bp upstream of 3' end of viral RNA excluding the poly(A) tail
1 aaataccttg aagttttgga ttttaaccac attgacggtt gctgtgaatc agtgtctcta
61 caatcaggaa aagaagcagt agaaaatttg gatacaggga aggactcgaa gaaggacacc
121 agtggcaaag gggataaacc acaaaactcg caaactggcc aaggtagcaa agaacagaca
181 aaaattggca cagtcagcaa agatgtgaat gttggatcga aaggaaaaga agtcccacga
241 ttacaaaaga taacaaagaa aatgaacctt ccgacagttg gtgggaaaat cattcttagc
301 ttagaccatt tactcgagta caaacctaat caagttgatc tgtttaacac tcgagcaaca
361 aaaacagagt ttgaatcatg gtacagcgca gttaaaattg aatatgatct taacgatgag
421 caaatgggtg tgattatgaa tggttttatg gtttggtgta tcgataatgg tacatctcca
481 gatgtcaatg gagtttgggt gatgatggat ggagaagagc aagttgagta tccattaaag
541 ccaattgttg aaaatgcaaa accaactcta agacaaatca tgcaccattt ctcagacgca
601 gcagaagcat atattgaaat gagaaactct gaaagtccgt atatgcctag atacggatta
661 ctaagaaatt tgagagacag ggaattagca cgctatgctt ttgactttta tgaggttact
721 tccaaaacac ctaatagggc aagagaagca atagcacaaa tgaaggccgc agctctcgcg
781 ggaattaaca gcaggttatt tgggcttgat ggtaatatct cgaccaattc cgaaaatact
841 gagaggcaca ctgcaaggga cgtgaatcag aatatgcata ctttgttggg tatgggtcca
901 ccgcagtaaa gactaggtaa actggtcaca gttagcattt cgggtcgtta taagttttct
961 atattataat gtgttgcact tttagtatag tgtgatttta tcacctttat actttttatg
1021 ttagtgtggt ttaaccacct tagtgtgcct tatattatag tttatgcata acagggagaa
1081 ccattacaat accggagttg tttgtagtgt gattacatca cggttgatag ccgaggtacg
1141 gtaatgtttg ttgtcct
//