GenBank-Updates@genbank.bio.net (03/13/91)
LOCUS RBDSEG10 1801 bp ds-RNA VRL 13-MAR-1991
DEFINITION Rice black-streaked dwarf virus genome segment 10.
ACCESSION D00606
KEYWORDS .
SOURCE Rice black-streaked dwarf virus, cDNA to viral RNA, clone pRB C3.
ORGANISM Rice black-streaked dwarf virus
Viridae; ds-RNA nonenveloped viruses; Reoviridae.
REFERENCE 1 (bases 1 to 1801)
AUTHORS Uyeda,I., Azuhata,F. and Shikata,E.
TITLE Nucleotide sequence of rice black-streaked dwarf virus genome
segment 10
JOURNAL Proc. Jpn. Acad. 66, 37-40 (1990)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Ichiro Uyeda
Department of Botany, Faculty of Agriculture
Hokkaido University
Kita-ku, Kita 9, Nishi 9
Sapporo 060
Japan
Phone: 011-716-2111 x2483
Fax: 011-716-0879
Clone pBR C3 contained the entire 3' terminal region and lacked
16 nt of the 5' terminal region. 16 nt of the 5' terminal
was determined by direct RNA sequence.
FEATURES Location/Qualifiers
repeat_region 19..29
/note="put. inverted repeat"
CDS 22..1698
/note="ORF"
repeat_region 1790..1800
/note="put. inverted repeat"
BASE COUNT 576 a 328 c 325 g 571 t 1 others
ORIGIN
1 nagttttttt cctcacccat aatggctgac ataagactcg atatagcgcc cgatcttatc
61 cataatggtg taccccagag actttccgat acaataattt taaacaaccg accaacaatc
121 actctgttat ctcatttcaa caatctattt catgaattaa acattgtcaa agcgccccac
181 gttgcatctt cccaaactac cattaatttg tacattcgct ttcatttgct gacccgactt
241 caccatagac tgcaaaccgt agaaactagc accttaccca acataacaca atttaaagac
301 catattcgta gtttctttca aaatgaacac caacctattt ttcagacact aacgaacaac
361 gacctaagcg aagaatttgt aggtgtgact acttttggac taagcttatt tgctacctcc
421 aaacttgatg ctgaacaaat agaacgtgtg caaattgaga ccttaactga aggaaatatt
481 acgttgaagc ccttttccgc tgatggttta gaagtcattc tcgatgatag ttatattggt
541 gtagttggca aaattccagg tttagaagtt cataaatttt tagataaatg ttgtcgtgaa
601 gttcctgctc aaatgggaat acttactgat gaagttaaac ttttgatgcg tactggtaaa
661 ttaagaattg atggtggtta tgatttcaat tgtcccgcaa gcactacaga tgttactcac
721 tacggtggtt atgaccaatt ttcacgtcaa atgttcgaac gtttaaatct attttataat
781 attagtctca gtataattcc cgtttcagct ttgaaaacag ttcatttatt tgaaaaagaa
841 ttaagtgttt tggatgcaga taaatctttg ctcgaacaga cctggagcgc agtagcgtca
901 tttgttgaaa cttggcaagt taaatctaag gttaaagctg atgatcccga tgaatacgaa
961 atgaccagtt tgtccacttt gcgtactaat tacgatggta cttctacttc tagtcccttt
1021 acagataaga aattcattga ctggtatatt aagacttttt ccaagactga gaaaggatcg
1081 tctttgcgta gaaatgaatt agaagagaaa agtgccagta gcatatcaac tacagtaaag
1141 aaggttaaaa ttcatttctc cgttcaatat tttgacgatt ttaaagttaa tggacacgaa
1201 aaaagcattg tagttcaaac tcataaaggt gaaatgtcat tagattatta tcgtaaaatt
1261 ggcgaagtgt tgagcgcgat ttggaaacgt ggtaaatctt tggctgtacc ttgttttgat
1321 tacattaaac ttggcgttga aaaagcattt catttggcac ccgtaattat gaagaagtat
1381 aacttgacga tcgacgacat tatcaatttt attgataaag gaccttccta tttggctaag
1441 ttggataaaa ttgatgattg ttctttaatt tcaaagctta ttattactag tgttttacct
1501 aacatcattc aacgtgttta taaaaccgat ccaagtaata atgttatgaa ctcagtaatt
1561 atcagtagag cgaacaattt gctgaaatct gacagggaca gggtattaaa gaaggcactt
1621 tccgccaacg tttcttcctc caacacatct agtcatgagc atacacagaa gatagtatta
1681 aataaagtaa caagatgacc actgggagta catcattagt gcgactagtt cagtgctgtg
1741 cgatcttcag ttcattatcg atgccgagtg acgacggcta gggggaaatt cagctattgt
1801 c
//