GenBank-Updates@genbank.bio.net (02/23/91)
LOCUS HPCRNASP 1413 bp ss-RNA VRL 23-FEB-1991
DEFINITION Hepatitis C virus RNA, 5'-noncoding and putative structural region.
ACCESSION D00574 D90080 M57585
KEYWORDS core protein; lumenal protein.
SOURCE Hepatitis C virus (JH/Japan/J7 and JH/Japan/J1), cDNA to viral RNA,
clones J7-28[b,c,l], J1-713[c,d,g],and J1-1216[c,g,i].
ORGANISM Hepatitis C virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Togaviridae incertae sedis.
REFERENCE 1 (bases 1063 to 1413)
AUTHORS Takeuchi,K., Boonmar,S., Kubo,Y., Katayama,T., Harada,H.,
Ohbayashi,A., Choo,Q.-L., Kuo,G., Houghton,M., Saito,I. and
Miyamura,T.
TITLE Hepatitis C viral cDNA clones isolated from a healthy carrier donor
implicated in post-transfusion non-A, non-B hepatitis
JOURNAL Gene 91, 287-291 (1990)
STANDARD full staff_entry
REFERENCE 2 (bases 1 to 1413)
AUTHORS Takeuchi,K., Kubo,Y., Boonmar,S., Watanabe,Y., Katayama,T.,
Choo,Q.-., Kuo,G., Houghton,M., Saito,I. and Miyamura,T.
TITLE Nucleotide sequence of core and envelope genes of the hepatitis C
virus genome derived directly from human healthy carriers
JOURNAL Nucleic Acids Res. 18, 4626-4626 (1990)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Kenji Takeuchi
National Institute of health Japan
2-10-35, Kamiosaki, Shinagawa-ku
Tokyo 141
Japan
Phone: 03-444-2181 x333
Fax: 03-444-6728
Nucleotide 91-1413 is consisted of two domains corresponding to
core and envelope regions of flaviviral genomes.
Clones J1-1216 series were used in [Gene 91, 287-291 (1990)].
FEATURES Location/Qualifiers
CDS 91..>1413
/note="5' part of polyprotein"
variation 507..507
/note="c in clones J1-713 series and J7-28b; t in clones
J7-28[c,l]"
BASE COUNT 255 a 422 c 418 g 318 t
ORIGIN
1 agccgagtag tgttgggtcg cgaaaggcct tgtggtactg cctgataggg tgcttgcgag
61 tgccccggga ggtctcgtag accgtgcatc atgagcacaa atcctaaacc ccaaagaaaa
121 accaaacgta acaccaaccg tcgcccacag gacgttaagt tcccgggcgg tggtcagatc
181 gtcggtggag tttacttgtt gccgcgcagg ggccccaggt tgggtgtgcg tgcgactagg
241 aagacttccg agcggtcgca acctcgtgga aggcgacaac ctatccccaa ggctcgccgg
301 cccgagggca ggacctgggc tcagcctggg tatccttggc ccctctatgg caatgagggc
361 ttggggtggg caggatggct cctgtcaccc cgcggctctc ggcctagttg gggccccaat
421 gacccccggc gtaggtcgcg taatttgggt aaggtcatcg atacccttac atgcggcttc
481 gccgacctca tggggtacat tccgctcgtc ggcgccccct tagggggcgc tgccagggcc
541 ctggcacatg gtgtccgggt tctggaggac ggcgtgaact atgcaacagg gaatttgccc
601 ggttgctctt tctctatctt cctcttggct ctgctgtcct gtttgaccat cccagcttcc
661 gcttatgaag tgcgcaacgt gtccgggata taccatgtca caaacgactg ctccaactca
721 agcattgtgt atgaggcggc ggacgtgatc atgcatgccc ccgggtgcgt gccctgcgtt
781 cgggagaaca attcctcccg ttgctgggta gcgctcactc ccacgctcgc ggccaggaat
841 gccagcgtcc ccactacgac attacgacgc cacgtcgact tgctcgttgg gacggctgct
901 ttctgctccg ctatgtacgt gggggatctc tgcggatctg ttttcctcat ctcccagctg
961 ttcaccttct cgcctcgccg gcatgagaca gtacaggact gcaactgctc aatctatccc
1021 ggccacgtat caggccatcg catggcttgg gatatgatga tgaactggtc gcccacggca
1081 gccttagtgg tgtcgcagtt actccggatc ccacaagctg tcatggacat ggtggcgggg
1141 gcccactggg gagtcctagc gggccttgcc tactattcca tggtggggaa ctgggctaag
1201 gttttgattg tgatgctact ctttgccggc gttgacgggc atacccgcgt gacggggggg
1261 gtgcaaggcc acgtcacctc tacactcacg tccctcttta gacctggggc gtcccagaaa
1321 attcagcttg taaacaccaa tggcagttgg catatcaaca ggactgccct gaactgcaat
1381 gactccctcc aaactgggtt ccttgccgcg ctg
//GenBank-Updates@genbank.bio.net (03/14/91)
LOCUS HPCRNASP 1413 bp ss-RNA VRL 14-MAR-1991
DEFINITION Hepatitis C virus RNA, 5'-noncoding and putative structural region.
ACCESSION D00574 D90080 M57585
KEYWORDS core protein; lumenal protein.
SOURCE Hepatitis C virus (JH/Japan/J7 and JH/Japan/J1), cDNA to viral RNA,
clones J7-28[b,c,l], J1-713[c,d,g],and J1-1216[c,g,i].
ORGANISM Hepatitis C virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Togaviridae incertae sedis.
REFERENCE 1 (bases 1063 to 1413)
AUTHORS Takeuchi,K., Boonmar,S., Kubo,Y., Katayama,T., Harada,H.,
Ohbayashi,A., Choo,Q.-L., Kuo,G., Houghton,M., Saito,I. and
Miyamura,T.
TITLE Hepatitis C viral cDNA clones isolated from a healthy carrier donor
implicated in post-transfusion non-A, non-B hepatitis
JOURNAL Gene 91, 287-291 (1990)
STANDARD full staff_entry
REFERENCE 2 (bases 1 to 1413)
AUTHORS Takeuchi,K., Kubo,Y., Boonmar,S., Watanabe,Y., Katayama,T.,
Choo,Q.-L., Kuo,G., Houghton,M., Saito,I. and Miyamura,T.
TITLE Nucleotide sequence of core and envelope genes of the hepatitis C
virus genome derived directly from human healthy carriers
JOURNAL Nucleic Acids Res. 18, 4626-4626 (1990)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Kenji Takeuchi
National Institute of health Japan
2-10-35, Kamiosaki, Shinagawa-ku
Tokyo 141
Japan
Phone: 03-444-2181 x333
Fax: 03-444-6728
Nucleotide 91-1413 is consisted of two domains corresponding to
core and envelope regions of flaviviral genomes.
Clones J1-1216 series were used in [Gene 91, 287-291 (1990)].
FEATURES Location/Qualifiers
CDS 91..>1413
/note="5' part of polyprotein"
variation 507..507
/note="c in clones J1-713 series and J7-28b; t in clones
J7-28[c,l]"
BASE COUNT 255 a 422 c 418 g 318 t
ORIGIN
1 agccgagtag tgttgggtcg cgaaaggcct tgtggtactg cctgataggg tgcttgcgag
61 tgccccggga ggtctcgtag accgtgcatc atgagcacaa atcctaaacc ccaaagaaaa
121 accaaacgta acaccaaccg tcgcccacag gacgttaagt tcccgggcgg tggtcagatc
181 gtcggtggag tttacttgtt gccgcgcagg ggccccaggt tgggtgtgcg tgcgactagg
241 aagacttccg agcggtcgca acctcgtgga aggcgacaac ctatccccaa ggctcgccgg
301 cccgagggca ggacctgggc tcagcctggg tatccttggc ccctctatgg caatgagggc
361 ttggggtggg caggatggct cctgtcaccc cgcggctctc ggcctagttg gggccccaat
421 gacccccggc gtaggtcgcg taatttgggt aaggtcatcg atacccttac atgcggcttc
481 gccgacctca tggggtacat tccgctcgtc ggcgccccct tagggggcgc tgccagggcc
541 ctggcacatg gtgtccgggt tctggaggac ggcgtgaact atgcaacagg gaatttgccc
601 ggttgctctt tctctatctt cctcttggct ctgctgtcct gtttgaccat cccagcttcc
661 gcttatgaag tgcgcaacgt gtccgggata taccatgtca caaacgactg ctccaactca
721 agcattgtgt atgaggcggc ggacgtgatc atgcatgccc ccgggtgcgt gccctgcgtt
781 cgggagaaca attcctcccg ttgctgggta gcgctcactc ccacgctcgc ggccaggaat
841 gccagcgtcc ccactacgac attacgacgc cacgtcgact tgctcgttgg gacggctgct
901 ttctgctccg ctatgtacgt gggggatctc tgcggatctg ttttcctcat ctcccagctg
961 ttcaccttct cgcctcgccg gcatgagaca gtacaggact gcaactgctc aatctatccc
1021 ggccacgtat caggccatcg catggcttgg gatatgatga tgaactggtc gcccacggca
1081 gccttagtgg tgtcgcagtt actccggatc ccacaagctg tcatggacat ggtggcgggg
1141 gcccactggg gagtcctagc gggccttgcc tactattcca tggtggggaa ctgggctaag
1201 gttttgattg tgatgctact ctttgccggc gttgacgggc atacccgcgt gacggggggg
1261 gtgcaaggcc acgtcacctc tacactcacg tccctcttta gacctggggc gtcccagaaa
1321 attcagcttg taaacaccaa tggcagttgg catatcaaca ggactgccct gaactgcaat
1381 gactccctcc aaactgggtt ccttgccgcg ctg
//