GenBank-Updates@genbank.bio.net (03/14/91)
LOCUS YEPOMPHA 824 bp ss-mRNA BCT 14-MAR-1991
DEFINITION Y.enterocolitica cationic outer membrane protein (ompH) gene,
complete cds.
ACCESSION M34854
KEYWORDS cationic outer membrane protein;
enterobacterial outer membrane protein;
lipopolysaccharide binding protein; secretory protein;
structural membrane protein.
SOURCE Y.enterocolitica (strain 03 isolate EH822) DNA, clone pUCHS115.
ORGANISM Yersinia enterocolitica
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 824)
AUTHORS Hirvas,L., Koski,P. and Vaara,M.
TITLE The ompH gene of yersinia enterocolitica: cloning, sequencing,
expression, and comparison iwth known enterobacterial ompH
sequences
JOURNAL J. Bacteriol. 173, 1223-1229 (1991)
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted
by L.H.Hirvas, 06-JUN-1990.
University of Helsinki
FEATURES Location/Qualifiers
misc_signal 120..125
/note="ompH -35 region"
misc_signal 143..148
/note="ompH -10 region"
misc_binding 308..317
/note="ompH ribosomal binding site"
CDS 324..818
/note="ompH protein precursor (gtg start codon)"
/codon_start=324
sig_peptide 324..392
/note="ompH protein signal peptide"
/codon_start=324
mat_peptide 393..815
/note="ompH protein"
/codon_start=393
BASE COUNT 257 a 147 c 198 g 221 t 1 others
ORIGIN
1 tattcctgat tacagtaaag ccagcaatat tcgtgtctct gccggtgtgg cactacaatg
61 gatgtctcca ttggggcctt tagtgttcgc atatgctaaa ccggttaaag attacgaagg
121 tgataagtca gagcaattcc agtttaacat ggtaaaactt ggtaattgat tggcaaaagt
181 agttgcaaat tttaaagaca gcactggtag ttgaaataac ctaaggtagc gctgatgagt
241 ttggcgctat tttaggcatt attcagtatt aagtgcactt caaggtgtct ctgacacaaa
301 caggtaatgg taaggagttt atagtgaaaa agtggttgtg tgcggcaagt cttggtttag
361 cattggcagc ttctgccagy gttcaagccg caaaaattgc tattgttaac gtttccagaa
421 ttttccaaca attacctgag agtgaaaccg tagctaaaca gttggagaat gaattcaaag
481 gccgagcaac cgaactgcaa ggaatggaga gcgatctgca gactaaaatg cagaaactgc
541 aacgtgacgg ttctaccatg aaagccagtg atcgtaccaa actggaaaat gacgtaatga
601 aacagcgtga aactttctct actaaagccc aggcttttga gcaagataat cgccgtcgtc
661 agatggaaga gcgtaataaa atcctgagcc gtattcagga tgctgttaaa tctgttgcta
721 gcaaaggcgg ttatgacgtg gtgattgatg caaatgctgt tgcatatgca gatccttcta
781 aagatatcac tgctgacgtg ctgaaacagg ttaaataaaa gtac
//