GenBank-Updates@genbank.bio.net (03/13/91)
LOCUS PSECOB 5379 bp ds-DNA BCT 13-MAR-1991
DEFINITION P.denitrificans cobA through cobE genes, complete cds.
ACCESSION M59236
KEYWORDS S-adenosyl-L-methionine:uroporphyrinogen III methyltransferase;
cobyrinic acid a,c-diamide synthase.
SOURCE P.denitrificans DNA.
ORGANISM Pseudomonas denitrificans
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Pseudomonadaceae.
REFERENCE 1 (bases 1 to 5379)
AUTHORS Crouzet,J., Cauchois,L., Blanche,F., Debussche,L., Thibaut,D.,
Rouyez,M.-C., Rigault,S., Mayaux,J.-F. and Cameron,B.
TITLE Nucleotide sequence of a Pseudomonas denitrificans 5.4-kilobase DNA
fragment containing five cob genes and identification of structural
genes encoding S-adenosyl-L-methionine: Uroporphyrinogen III
methyltransferase and cobyrinic acid a,c-diamide syn
JOURNAL J. Bacteriol. 172, 5968-5979 (1990)
STANDARD full staff_entry
FEATURES Location/Qualifiers
CDS 528..992
/note="ORF 1"
/gene="cobE"
/codon_start=528
CDS 1120..1962
/note="ORF 2"
/product="S-adenosyl-L-methionine:uroporphyrinogen III
metheyltrasnferase"
/gene="cobA"
/codon_start=1120
CDS 1959..3263
/note="ORF 3"
/product="cobyrinic acid a,c-diamide synthase"
/gene="cobB"
/codon_start=1959
CDS 3260..4261
/note="ORF 4"
/gene="cobC"
/codon_start=3260
CDS 4263..5234
/note="ORF 5"
/gene="cobD"
/codon_start=4263
BASE COUNT 806 a 1724 c 1814 g 1035 t
ORIGIN
1 atcgatgaag cctgcgatga aggcggcgac gaacaggaag gcgagcaggt ggaaggcgag
61 atcttgcacg gcggggactc gagaggagag ctgtcaggcg ggattttccg ccttgtgtca
121 gagcccggcg cgatttgcaa agccttctgt cgcggtgttg ctgtccatgc aggtgtcgaa
181 attgaaaaac cgacaaagat tcacagcctt gttccagctc gctgtctttc tggatggagg
241 cgctctcgcc cgcatggtgc cgaagaaggg ctgtccttgc gatacggtag gcggatgacg
301 atcttcctca aacgcgacat ggcgatggcg caatccggtt tgaccggcct tccgcgctcc
361 ggtaaaaatg aaggatatgc gacggcgtcc gctttggcgg actgaaagag cgtccggtgc
421 ggccgaccca gtcagggggg catcagccgg tgctgtccag atcggccggg acggatcgtc
481 ccagccggcg cttcgttaag gagaacaacg aagggagccg gccgccgatg ccatcgggcc
541 aacactctgc acagacgacg aaagcaggag ccgggctggt gctcgggctc ggctgcgagc
601 gtcgcacgcc ggccgaagag gtgatcgccc ttgccgagcg tgcgcttgcc gatgccggtg
661 ttgcgcccgg cgatctgcgg ctggtcgcct cgctcgatgc tcgcgccgag gagccggcga
721 tcctggcggc cgctcagcat ttcgcggttc cggccgcgtt ctacgatgcc gccacgctcg
781 aagccgaagc ttcccggctc gccaacccgt ccgagatcgt ctttgcctac acgggttgtc
841 atggcgttgc cgagggtgca gcgctcgtcg gcgccggtcg cgaagccgtg ctgattgtgc
901 agaagatcgt ctccgcccat gcgacggccg cacttgccgg gccggcgacc ttgcgcgccg
961 aaaagcgcat ccaggcggcg gaggctgtct gatgcattct tatgttgttg aattgaatca
1021 atcttttgcc cggggtttct ctcaagtgga atccggttct ttagagagcg cgtcaggcgt
1081 gccgttgggt ggcgccgaaa tacaggtggg acagcacgca tgatcgacga cctctttgcc
1141 ggattgccgg cgctcgaaaa aggttcggtc tggctggtcg gcgccggccc cggcgatccc
1201 ggcctgttga cgctgcatgc ggccaatgcg ctgcgccagg cggatgtgat cgtgcatgat
1261 gcgctggtca acgaggattg cctgaagctc gcgcggccgg gcgccgtgct ggagtttgcg
1321 ggcaagcgtg gcggcaagcc gtcgccgaag cagcgcgaca tctcgcttcg cctcgtcgaa
1381 ctcgcgcgcg ccggcaaccg ggtgctgcgc ctcaaaggcg gcgatccctt cgtcttcggt
1441 cgcggtggcg aggaggcgct gacgctggtc gaacaccagg tgccgttccg aatcgtgccc
1501 ggcatcaccg ccggtatcgg cgggcttgcc tatgccggca ttcccgtgac ccatcgcgag
1561 gtcaaccacg cggtcacttt cctgactggc catgattcct ccggcctggt gccggatcgc
1621 atcaactggc agggcatcgc cagcggctcg cctgtcatcg tcatgtacat ggcgatgaaa
1681 catatcggcg cgatcaccgc caacctcatt gccggcggcc gctcgccgga cgaaccggtc
1741 gccttcgtct gcaacgccgc gacgccgcag caggcggtgc tggaaacgac gcttgcgcgt
1801 gcagaggccg atgttgcggc ggcagggctg gagccgccgg cgatcgtcgt cgtcggcgag
1861 gtggtgcggc tgcgcgcagc gctcgactgg atcggcgcgc tggacgggcg caagcttgcc
1921 gccgacccgt tcgccaatcg cattctcagg aacccggcat gagcggattg ctgattgccg
1981 cacccgcgtc cggctccggc aagacgacgg tgacgctcgg gctgatgcgc gccctgaaga
2041 ggcgcggcgt ggcgatcgcg cccggcaagg cggggccgga ctatatcgat cccgctttcc
2101 acgcggcagc gaccggcgag ccctgcttca actacgaccc ctgggcgatg cgcccggaac
2161 tgctgcttgc caatgcgtcg catgtggcct ccggcgggcg cacattgatc gtcgaggcga
2221 tgatgggact gcatgacggt gctgccgacg gctcgggaac gccagcggac ctcgccgcga
2281 cgctgaacct tgcggtcatt ctggtggtcg attgcgcccg catgtcccag tcggttgccg
2341 ccctcgtgcg cggctatgcg gatcatcgcg acgatatccg ggtggttggc gtcatcctca
2401 acaaggtcgg cagcgatcgg catgaaatga tgctgcgcga tgcgctcggc aaggtgcgca
2461 tgcctgtctt cggcgtgctc cggcaggaca gcgcattgca actgccggag cgccatctcg
2521 ggctcgtgca ggcgggcgaa cactcagcgc ttgagggctt catcgaggcg gcggccgcgc
2581 gggtcgaggc tgcctgcgat ctcgacgcca tccgcctgat cgcgacgatt ttcccgcagg
2641 tgcccgcggc ggccgatgcc gagcgtttgc ggccgctcgg tcagcgcatc gcggtcgcgc
2701 gcgatatcgc ctttgccttc tgctacgagc acctgcttta cggctggcgg caaggcggcg
2761 cggagatttc cttcttctcg ccgctcgccg acgaggggcc ggatgcggca gccgatgccg
2821 tctatcttcc ggggggttat ccggagctgc atgcggggca gctgagcgcc gccgcccgat
2881 tccgttccgg catgcattcc gcggcggaac gcggcgcccg catcttcggc gagtgcggcg
2941 gctatatggt gctcggcgaa gggcttgtcg ctgccgatgg cacacgctac gacatgctcg
3001 gcctgctgcc gctcgtaacc agttttgccg agcgcaggcg gcacctcggc tatcgccgcg
3061 tcgtgcctgt cgacaacgcc ttcttcgatg gacccatgac ggcgcacgaa ttccactatg
3121 cgaccatcgt cgccgaaggg gcggccgatc ggctgtttgc ggtcagcgac gccgccggcg
3181 aggatctcgg ccaggcgggc ctccggcgcg gccctgtcgc cggttccttc atgcatctga
3241 tcgacgtcgc aggtgctgca tgagcgcacc gatcgttcat ggtggcggca tcaccgaggc
3301 cgcagcgcgc tatggcggcc ggcctgaaga ctggctcgat ctgtcgaccg gcatcaatcc
3361 atgccccgtc gccttgcccg cggtccctga gcgcgcctgg caccggctgc cggatcggca
3421 gacggtagat gatgcgcgga gcgccgccgc cgactactac cgcaccaacg gcgtgctgcc
3481 tttgccggtg ccgggcaccc agtcggtgat ccagctcctg ccacgtcttg ctccggccaa
3541 caggcacgtc gcgattttcg ggccgaccta tggcgagtat gcccgcgtgc ttgaagcggc
3601 cggctttgct gtcgatcgcg tcgcggatgc cgacgcgctc acggccgaac atgggcttgt
3661 catcgtcgtc aaccccaaca acccgaccgg ccgcgccttg gcgccggcgg agcttctggc
3721 gatcgccgca aggcagaagg cgagcggcgg actgctgctg gtcgatgagg ccttcggcga
3781 tcttgagccg caactgagtg tcgctggtca cgcgtcaggg caaggcaacc tcatcgtctt
3841 ccgctccttc ggcaagttct tcggccttgc gggcctgcgc ctcggcttcg tcgttgcgac
3901 cgagccagtg cttgcatcct ttgccgattg gctcggtccc tgggctgtct ccggcccggc
3961 gttgacgatc tcgaaagcgc tgatgcaggg cgatacgaag gcgatcgcgg cgggcatcct
4021 cgagcgtcgc gccggcctcg atgcggctct cgatggggca gggctcaacc gtatcggcgg
4081 cacggggcta ttcgtgctgg tcgagcatcc cagggcagct ctgctgcagg agcggctctg
4141 cgaggcccat attctcacgc gcaagttcga ctatgccccg acctggctca gggtcggtct
4201 tgcgcctgac gcggctggtg accgacggct ggcggacgcg cttgcccgca tggagctctg
4261 aggtgtcgga gacgatcctg ctcattctcg cgctggcgct ggtgatcgac cgcgttgtcg
4321 gcgatccgga ctggctctgg gcgcgcgtgc cgcatccggt cgtgtttttc ggcaaggcca
4381 tcggcttttt cgacgcgcgg ctgaaccggg aggacctcga ggatagcgcg cgcaaatttc
4441 gtggcgtcgt cgcgatcctt ttgttgcttg gcatcagcgc ctggttcggc catctgctgc
4501 atcgcctgtt cgccgtcctc ggaccgctcg gctttctgct cgaggcggtt ctggtcgcgg
4561 tcttcctggc acagaagagc ctcgccgatc acgtgcgtcg cgtggccggg ggcttgcgac
4621 agggcgggct ggaaggcggg cgtgccgccg tgtcgatgat cgttggtcgc gatccaaaga
4681 cgctcgacga gccggcggtc tgccgtgccg cgatcgaaag ccttgccgag aatttctccg
4741 acggcgtcgt ggcgccggcc ttctggtacg cggttgccgg cctgccgggg cttcttgcct
4801 acaagatgct gaacaccgcc gattcgatga tcggccacaa gtcgccgaaa tatctgcact
4861 tcggctgggc ctcggcccga ctcgacgatc tcgccaacct gccggcagcg aggctctcga
4921 tccttttgat ctcagccggt gcgctgatcc atcgtggcgc cagcgccgcc aaggatgcgc
4981 tgaccgtggc ccttcgcgac catggcctgc accgctcgcc gaactccggc tggccggaag
5041 cggccatggc cggcgcgctc gatctgcagc ttgccggtcc gcggatctat ggcggcgtca
5101 aggtcagcga acctatgatc aacggtccgg gccgagcggt tgcaacaagc gaagacatcg
5161 acgccggtat tgctgtattt tatggcgcct gtacggtcat ggccgggttt gttcttgcaa
5221 tcgcaatgat ttgatcgcgg aagttgacct tcgcattaag actctgcttt ccatatgtat
5281 taagatcgta tcatattcga tcagttattc tcctggaacg tttggttcca ccggtacgtg
5341 ttcgtcttcc cggagagaga gaagcatgcg caaaagctt
//GenBank-Updates@genbank.bio.net (03/15/91)
LOCUS PSECOB 5379 bp ds-DNA BCT 15-MAR-1991
DEFINITION P.denitrificans cobA through cobE genes, complete cds.
ACCESSION M59236 M32223
KEYWORDS S-adenosyl-L-methionine:uroporphyrinogen III methyltransferase;
cobyrinic acid a,c-diamide synthase.
SOURCE P.denitrificans DNA.
ORGANISM Pseudomonas denitrificans
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Pseudomonadaceae.
REFERENCE 1 (bases 1 to 5379)
AUTHORS Crouzet,J., Cauchois,L., Blanche,F., Debussche,L., Thibaut,D.,
Rouyez,M.-C., Rigault,S., Mayaux,J.-F. and Cameron,B.
TITLE Nucleotide sequence of a Pseudomonas denitrificans 5.4-kilobase DNA
fragment containing five cob genes and identification of structural
genes encoding S-adenosyl-L-methionine: Uroporphyrinogen III
methyltransferase and cobyrinic acid a,c-diamide syn
JOURNAL J. Bacteriol. 172, 5968-5979 (1990)
STANDARD full staff_entry
FEATURES Location/Qualifiers
CDS 528..992
/note="ORF 1"
/gene="cobE"
/codon_start=528
CDS 1120..1962
/note="ORF 2"
/product="S-adenosyl-L-methionine:uroporphyrinogen III
metheyltrasnferase"
/gene="cobA"
/codon_start=1120
CDS 1959..3263
/note="ORF 3"
/product="cobyrinic acid a,c-diamide synthase"
/gene="cobB"
/codon_start=1959
CDS 3260..4261
/note="ORF 4"
/gene="cobC"
/codon_start=3260
CDS 4263..5234
/note="ORF 5"
/gene="cobD"
/codon_start=4263
BASE COUNT 806 a 1724 c 1814 g 1035 t
ORIGIN
1 atcgatgaag cctgcgatga aggcggcgac gaacaggaag gcgagcaggt ggaaggcgag
61 atcttgcacg gcggggactc gagaggagag ctgtcaggcg ggattttccg ccttgtgtca
121 gagcccggcg cgatttgcaa agccttctgt cgcggtgttg ctgtccatgc aggtgtcgaa
181 attgaaaaac cgacaaagat tcacagcctt gttccagctc gctgtctttc tggatggagg
241 cgctctcgcc cgcatggtgc cgaagaaggg ctgtccttgc gatacggtag gcggatgacg
301 atcttcctca aacgcgacat ggcgatggcg caatccggtt tgaccggcct tccgcgctcc
361 ggtaaaaatg aaggatatgc gacggcgtcc gctttggcgg actgaaagag cgtccggtgc
421 ggccgaccca gtcagggggg catcagccgg tgctgtccag atcggccggg acggatcgtc
481 ccagccggcg cttcgttaag gagaacaacg aagggagccg gccgccgatg ccatcgggcc
541 aacactctgc acagacgacg aaagcaggag ccgggctggt gctcgggctc ggctgcgagc
601 gtcgcacgcc ggccgaagag gtgatcgccc ttgccgagcg tgcgcttgcc gatgccggtg
661 ttgcgcccgg cgatctgcgg ctggtcgcct cgctcgatgc tcgcgccgag gagccggcga
721 tcctggcggc cgctcagcat ttcgcggttc cggccgcgtt ctacgatgcc gccacgctcg
781 aagccgaagc ttcccggctc gccaacccgt ccgagatcgt ctttgcctac acgggttgtc
841 atggcgttgc cgagggtgca gcgctcgtcg gcgccggtcg cgaagccgtg ctgattgtgc
901 agaagatcgt ctccgcccat gcgacggccg cacttgccgg gccggcgacc ttgcgcgccg
961 aaaagcgcat ccaggcggcg gaggctgtct gatgcattct tatgttgttg aattgaatca
1021 atcttttgcc cggggtttct ctcaagtgga atccggttct ttagagagcg cgtcaggcgt
1081 gccgttgggt ggcgccgaaa tacaggtggg acagcacgca tgatcgacga cctctttgcc
1141 ggattgccgg cgctcgaaaa aggttcggtc tggctggtcg gcgccggccc cggcgatccc
1201 ggcctgttga cgctgcatgc ggccaatgcg ctgcgccagg cggatgtgat cgtgcatgat
1261 gcgctggtca acgaggattg cctgaagctc gcgcggccgg gcgccgtgct ggagtttgcg
1321 ggcaagcgtg gcggcaagcc gtcgccgaag cagcgcgaca tctcgcttcg cctcgtcgaa
1381 ctcgcgcgcg ccggcaaccg ggtgctgcgc ctcaaaggcg gcgatccctt cgtcttcggt
1441 cgcggtggcg aggaggcgct gacgctggtc gaacaccagg tgccgttccg aatcgtgccc
1501 ggcatcaccg ccggtatcgg cgggcttgcc tatgccggca ttcccgtgac ccatcgcgag
1561 gtcaaccacg cggtcacttt cctgactggc catgattcct ccggcctggt gccggatcgc
1621 atcaactggc agggcatcgc cagcggctcg cctgtcatcg tcatgtacat ggcgatgaaa
1681 catatcggcg cgatcaccgc caacctcatt gccggcggcc gctcgccgga cgaaccggtc
1741 gccttcgtct gcaacgccgc gacgccgcag caggcggtgc tggaaacgac gcttgcgcgt
1801 gcagaggccg atgttgcggc ggcagggctg gagccgccgg cgatcgtcgt cgtcggcgag
1861 gtggtgcggc tgcgcgcagc gctcgactgg atcggcgcgc tggacgggcg caagcttgcc
1921 gccgacccgt tcgccaatcg cattctcagg aacccggcat gagcggattg ctgattgccg
1981 cacccgcgtc cggctccggc aagacgacgg tgacgctcgg gctgatgcgc gccctgaaga
2041 ggcgcggcgt ggcgatcgcg cccggcaagg cggggccgga ctatatcgat cccgctttcc
2101 acgcggcagc gaccggcgag ccctgcttca actacgaccc ctgggcgatg cgcccggaac
2161 tgctgcttgc caatgcgtcg catgtggcct ccggcgggcg cacattgatc gtcgaggcga
2221 tgatgggact gcatgacggt gctgccgacg gctcgggaac gccagcggac ctcgccgcga
2281 cgctgaacct tgcggtcatt ctggtggtcg attgcgcccg catgtcccag tcggttgccg
2341 ccctcgtgcg cggctatgcg gatcatcgcg acgatatccg ggtggttggc gtcatcctca
2401 acaaggtcgg cagcgatcgg catgaaatga tgctgcgcga tgcgctcggc aaggtgcgca
2461 tgcctgtctt cggcgtgctc cggcaggaca gcgcattgca actgccggag cgccatctcg
2521 ggctcgtgca ggcgggcgaa cactcagcgc ttgagggctt catcgaggcg gcggccgcgc
2581 gggtcgaggc tgcctgcgat ctcgacgcca tccgcctgat cgcgacgatt ttcccgcagg
2641 tgcccgcggc ggccgatgcc gagcgtttgc ggccgctcgg tcagcgcatc gcggtcgcgc
2701 gcgatatcgc ctttgccttc tgctacgagc acctgcttta cggctggcgg caaggcggcg
2761 cggagatttc cttcttctcg ccgctcgccg acgaggggcc ggatgcggca gccgatgccg
2821 tctatcttcc ggggggttat ccggagctgc atgcggggca gctgagcgcc gccgcccgat
2881 tccgttccgg catgcattcc gcggcggaac gcggcgcccg catcttcggc gagtgcggcg
2941 gctatatggt gctcggcgaa gggcttgtcg ctgccgatgg cacacgctac gacatgctcg
3001 gcctgctgcc gctcgtaacc agttttgccg agcgcaggcg gcacctcggc tatcgccgcg
3061 tcgtgcctgt cgacaacgcc ttcttcgatg gacccatgac ggcgcacgaa ttccactatg
3121 cgaccatcgt cgccgaaggg gcggccgatc ggctgtttgc ggtcagcgac gccgccggcg
3181 aggatctcgg ccaggcgggc ctccggcgcg gccctgtcgc cggttccttc atgcatctga
3241 tcgacgtcgc aggtgctgca tgagcgcacc gatcgttcat ggtggcggca tcaccgaggc
3301 cgcagcgcgc tatggcggcc ggcctgaaga ctggctcgat ctgtcgaccg gcatcaatcc
3361 atgccccgtc gccttgcccg cggtccctga gcgcgcctgg caccggctgc cggatcggca
3421 gacggtagat gatgcgcgga gcgccgccgc cgactactac cgcaccaacg gcgtgctgcc
3481 tttgccggtg ccgggcaccc agtcggtgat ccagctcctg ccacgtcttg ctccggccaa
3541 caggcacgtc gcgattttcg ggccgaccta tggcgagtat gcccgcgtgc ttgaagcggc
3601 cggctttgct gtcgatcgcg tcgcggatgc cgacgcgctc acggccgaac atgggcttgt
3661 catcgtcgtc aaccccaaca acccgaccgg ccgcgccttg gcgccggcgg agcttctggc
3721 gatcgccgca aggcagaagg cgagcggcgg actgctgctg gtcgatgagg ccttcggcga
3781 tcttgagccg caactgagtg tcgctggtca cgcgtcaggg caaggcaacc tcatcgtctt
3841 ccgctccttc ggcaagttct tcggccttgc gggcctgcgc ctcggcttcg tcgttgcgac
3901 cgagccagtg cttgcatcct ttgccgattg gctcggtccc tgggctgtct ccggcccggc
3961 gttgacgatc tcgaaagcgc tgatgcaggg cgatacgaag gcgatcgcgg cgggcatcct
4021 cgagcgtcgc gccggcctcg atgcggctct cgatggggca gggctcaacc gtatcggcgg
4081 cacggggcta ttcgtgctgg tcgagcatcc cagggcagct ctgctgcagg agcggctctg
4141 cgaggcccat attctcacgc gcaagttcga ctatgccccg acctggctca gggtcggtct
4201 tgcgcctgac gcggctggtg accgacggct ggcggacgcg cttgcccgca tggagctctg
4261 aggtgtcgga gacgatcctg ctcattctcg cgctggcgct ggtgatcgac cgcgttgtcg
4321 gcgatccgga ctggctctgg gcgcgcgtgc cgcatccggt cgtgtttttc ggcaaggcca
4381 tcggcttttt cgacgcgcgg ctgaaccggg aggacctcga ggatagcgcg cgcaaatttc
4441 gtggcgtcgt cgcgatcctt ttgttgcttg gcatcagcgc ctggttcggc catctgctgc
4501 atcgcctgtt cgccgtcctc ggaccgctcg gctttctgct cgaggcggtt ctggtcgcgg
4561 tcttcctggc acagaagagc ctcgccgatc acgtgcgtcg cgtggccggg ggcttgcgac
4621 agggcgggct ggaaggcggg cgtgccgccg tgtcgatgat cgttggtcgc gatccaaaga
4681 cgctcgacga gccggcggtc tgccgtgccg cgatcgaaag ccttgccgag aatttctccg
4741 acggcgtcgt ggcgccggcc ttctggtacg cggttgccgg cctgccgggg cttcttgcct
4801 acaagatgct gaacaccgcc gattcgatga tcggccacaa gtcgccgaaa tatctgcact
4861 tcggctgggc ctcggcccga ctcgacgatc tcgccaacct gccggcagcg aggctctcga
4921 tccttttgat ctcagccggt gcgctgatcc atcgtggcgc cagcgccgcc aaggatgcgc
4981 tgaccgtggc ccttcgcgac catggcctgc accgctcgcc gaactccggc tggccggaag
5041 cggccatggc cggcgcgctc gatctgcagc ttgccggtcc gcggatctat ggcggcgtca
5101 aggtcagcga acctatgatc aacggtccgg gccgagcggt tgcaacaagc gaagacatcg
5161 acgccggtat tgctgtattt tatggcgcct gtacggtcat ggccgggttt gttcttgcaa
5221 tcgcaatgat ttgatcgcgg aagttgacct tcgcattaag actctgcttt ccatatgtat
5281 taagatcgta tcatattcga tcagttattc tcctggaacg tttggttcca ccggtacgtg
5341 ttcgtcttcc cggagagaga gaagcatgcg caaaagctt
//