GenBank-Updates@genbank.bio.net (03/15/91)
LOCUS LIL369T2 2970 bp ss-RNA VRL 15-MAR-1991
DEFINITION Louping ill virus capsid, premembrane, membrane and envelope
proteins, complete cds and NS1 protein, 5' end.
ACCESSION M59376 M37687
KEYWORDS NS1 protein; capsid protein; envelope protein; membrane protein;
premembrane protein.
SOURCE Louping ill virus (strain 369/T2), cDNA to genomic RNA.
ORGANISM Louping ill virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Flaviviridae.
REFERENCE 1 (bases 1 to 2970)
AUTHORS Shiu,S.Y., Ayres,M.D. and Gould,E.A.
TITLE Genomic sequence of the structural proteins of Louping ill virus:
Comparative analysis with Tick-borne encephalitis virus
JOURNAL Virology 180, 411-415 (1991)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 31..>2970
/product="polyprotein"
/codon_start=31
mat_peptide 34..378
/product="capsid protein"
/codon_start=34
mat_peptide 379..645
/product="premembrane protein"
/codon_start=379
mat_peptide 646..870
/product="membrane protein"
/codon_start=646
mat_peptide 871..2358
/product="envelope protein"
/codon_start=871
mat_peptide 2359..2970
/product="NS1 protein"
/codon_start=2359
/partial
BASE COUNT 763 a 638 c 960 g 609 t
ORIGIN
1 aaagacagct taggagaaca agagctgggg atgggcagga agaccatcct gaaaggtaag
61 gggggcggtc cccctcgacg agtgtcgaaa gagaccgcaa cgaagacgcg tcaacctaga
121 gtccaaatgc caaatggact ggtgttgatg cgcatgatgg ggatcttgtg gcatgctgtg
181 gctggcactg cgagaaaccc tgctttgaaa gcattctgga attccgtccc gttgaggcag
241 gccactgcag cacttcggaa gataaagagg acagtgagtg ctttgatggt tggcttgcaa
301 aggcgcggaa aaaggaggtc agtgacgaac tggatgaact ggttgctggt cattgctctg
361 ctggggatga cacttgcagc gacagtaagg aaagaagggg acggcaccac tgtgatcagg
421 gctgaaggaa gggacgcggc aacgcaggtg cgtgtggaga acggcacctg tgtgatcctg
481 gccacagaca tggggtcatg gtgtgatgac tcgctgtcat acgagtgtgt gaccatagag
541 caaggggaag agcctgttga cgtggattgt ttttgccgga atgttgacgg agtctatctg
601 gagtatggcc gttgtgggaa acaggagggc tcacggacaa gacgctcggt gctgatccca
661 acccatgccc agggcgagtt gacggggagg ggacgcaaat ggttggaagg agactcactg
721 cggacacacc tcacgagagt ggaaggatgg gtttggaaaa acaaactgct tgctctggcg
781 atggtcgccg ttgtgtggct agcactggag agtgtggtga ccagggttgc cgtgctggtt
841 gtgctcctgt gtttggcccc ggtctacgcc tcacgctgca cacacttgga aaacagggac
901 tttgtcactg gcacccaggg gactacaaga gtcaccttgg tgctggagct gggtggatgc
961 gtaaccataa ccgctgaggg gaagccctca atggatgtgt ggcttgacgc catctaccag
1021 gaaagccctg ccaagacacg cgagtactgt ttgcacgcca agttgtcaga gaccaaggtt
1081 gctgctagat gtccaacgat gggaccagct gtcctgactg aagaacgcca gattggcaca
1141 gtgtgcaaga gggaccagag tgatcgaggc tggggaaatc actgtggttt gtttggaaag
1201 ggcagcattg tggcctgcgt caaggcggct tgtgaagcaa agaagaaagc tacgggatac
1261 gtgtacgatg ccaacaaaat agtgtacaca gtgaaggttg aaccacacac gggagactat
1321 gttgccgcca atgagacgca caaggggagg aagacggcga ctttcacggt ttcttcagag
1381 aagaccatct tgaccctagg ggaatatgga gacgtctcac tgctatgtag ggtagccagt
1441 ggcgtcgact tggctcagac catcatcctg gagctcgaca agacagcgga gcaccttcca
1501 acagcttggc aggtccaccg agactggttt aatgacctgg ctctcccgtg gaagcatgat
1561 ggaaacccac attggaacaa tgcagagaga ctggttgagt ttggcgctcc tcatgctgtc
1621 aagatggatg tgtacaacct tggagatcag actggagtgc tgctgagggc actagcaggg
1681 gttcctgtgg cacacattga gggaaacaag tatcacctga agagtggtca tgtgacctgc
1741 gaagtgggac tggaaaaact aaagatgaaa ggtctcacgt acacaatgtg tgataaatca
1801 aagtttgcat ggaagagaac tccaacagac agcgggcatg acacagtggt tatggaagtc
1861 acattctccg ggtcaaagcc atgcaggatc ccggtgagag cagtggcaca tggatctcct
1921 gatgtcaatg tggccatgct gataacgcca aaccccacaa ttgaaaatga tggagggggc
1981 ttcatagaga tgcagcttcc cccaggggac aatatcatct atgttgggga actgagtcat
2041 caatggttcc agacagggag cagcattgga agggtgttcc aaacaaccag gaaaggtata
2101 gaaagactga cagtaatagg agagcacgcc tgggactttg gatccgctgg tggcttcttt
2161 ggctcaattg gaaaggcggt gcacacggtt cttggtggtg ccttcaacag catctttgga
2221 ggagtggggt tcctgccaaa gctcctaatg ggagtggcac tggcctggtt gggactgaac
2281 acaaggaacc ccacaatgtc catgagcttt ctcttggctg gaggtctggt cttggccatg
2341 actctcgggg tgggagcgga tgtcggctgt gcagtggaca cagagcgaat ggagctccgc
2401 tgtggtgaag gtttggttgt gtggagagag gtttcagagt ggtatgacaa ctatgcatac
2461 tacccggaga caccaggggc tcttgcatcg gcagtaaaag aggcatttga ggagggaagc
2521 tgtggcgtgg tcccccagaa cagacttgag atggccatgt ggagaagctc ggtcacggaa
2581 ctgaatctgg ctttagtgga aggggatgca aatctcacag tggtggtaga caaaaacgac
2641 cctactgact accgaggtgg agttcctggc acgctgaaaa aagggaagga catgaaggtc
2701 tcttggagga gctggggcca ctcaatgatc tggagtatcc ctgaggctcc tcggcgtttc
2761 atggtgggta cagagggaca aagtgagtgc ccactagaga gacgaaaaac aggtgtgttc
2821 acggttgcag agtttggggt cggtctgaga acaaaagtct ttctggactt tagacaggaa
2881 ccaacacacg agtgtgacac aggagtgatg ggggccgccg tcaaaaacgg catggcggtc
2941 cacacagatc aaagcctctg gatgaaatcg
//