GenBank-Updates@genbank.bio.net (03/19/91)
LOCUS ECOKDTA 2864 bp ds-DNA BCT 19-MAR-1991
DEFINITION Escherichia coli KDO transferase (kdtA) gene, complete cds, and
formamidopyrimidine-DNA glycosylase (fpg) gene, 3' end.
ACCESSION M60670
KEYWORDS 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase;
KDO transferase; formamidopyrimidine-DNA glycosylase; fpg gene;
kdtA gene.
SOURCE E.coli K-12 DNA.
ORGANISM Escherichia coli
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Facultatively anaerobic rods; Enterobacteriaceae.
REFERENCE 1 (bases 1 to 2864)
AUTHORS Clementz,T. and Raetz,C.R.
TITLE A gene coding for KDO transferase in Escherichia coli:
Identification, mapping, cloning and sequencing
JOURNAL J. Biol. Chem. (1991) In press
STANDARD full staff_entry
FEATURES Location/Qualifiers
CDS 790..2067
/product="KDO transferase"
/gene="kdtA"
/codon_start=790
CDS 2075..2554
/note="function unknown"
/product="18 kD protein"
/codon_start=2075
stem_loop 2562..2583
CDS complement(2593..2864)
/note="This sequence overlaps with the 3' end of the fpg
gene in entry with accession number X06036."
/product="formamidopyrimidine-DNA glycosylase"
/gene="fgp"
/codon_start=2862
/partial
BASE COUNT 718 a 730 c 682 g 727 t 7 others
ORIGIN
1 aagctttttt tccaaatacc atgctgccga tgaccataaa gttgcgatat tttcatccgt
61 gcaggtaaac aacgtaccag cagcgccacc atccactgat ccgtaagatt aatgaccagg
121 tcataattat tcgcacgcag agtttttatc aacgaaagca catttttaat tttatcgaaa
181 gttcccgcac ctttattgct tatcccatag agcgcattaa tttccgggtt ttcagacaaa
241 atagggatgg tgtcctgata aagcagcata tcgatttttg catcaggata attctgcttg
301 agcgtactga tgacaggagt agttaataac atatccccat gatatcgcat ctttatgacc
361 aggatttttc gaaatggctt ttccactagc gactcttttg tgtgattgtc tggttaagtt
421 aagcannnna agcassctac gccccaggct caacagctac ctgaatactg ataacgcact
481 tactttgacg tgctagtgta tcatttcttt cgcagcaatc cgacccgaat gatttttata
541 cacaaaatat actttaatca taaaaatcaa atagataaaa aatagcattt cgataatgtc
601 agtacggcct atgtagattt gaaaatgggg ccgagtttca atgaatcgca taaaaataca
661 aaaaaaatga agatgtagcg gcagatcaga ccaaactgaa gctatttaag tcaaaaacgg
721 gaaaagtaat ggtaaagcca cagctaaata catagaatcc ccagcacatc cataagtcag
781 ctatttacta tgctcgaatt gctttacacc gcccttctct accttattca gccgctgatc
841 tggatacggc tctgggtgcg cggacgtaag gctccggcct atcgaaaacg ctggggtgaa
901 cgttacggtt tttaccgcca tccgctaaaa ccaggcggca ttatgctgca ctccgtctcc
961 gtcggtgaaa ctctggcggc aatcccgttg gtgcgcgcgc tgcgtcatcg ttatcctgat
1021 ttaccgatta ccgtaacaac catgacgcca accggttcgg agcgcgtaca atcggctttc
1081 gggaaggatg ttcagcacgt ttatctgccg tatgatctgc ccgatgcact caaccgtttc
1141 ctgaataaag tcgaccctaa actggtgttg attatggaaa ccgaactatg gcctaacctg
1201 attgcggcgc tacataaacg taaaattccg ctggtgatcg ctaacgcgcg actctctgcc
1261 cgctcggccg caggttatgc caaactgggt aaattcgtcc gtcgcttgct gcgtcgtatt
1321 acgctgattg ctgcgcaaaa tgaagaagat ggtgcacgtt ttgtggcgct gggcgcaaaa
1381 aataatcagg tgaccgttac cggtagcctg aaattcgata tttctgtaac gccgcagttg
1441 gctgctaaag ccgtgacgct gcgccgccag tgggcaccac accgcccggt atggattgcc
1501 accagcactc acgaaggcga agagagtgtg gtgatcgccg cacatcaggc attgttacag
1561 caattcccga atttattgct catcctggta ccccgtcatc cggaacgctt cccggatgcg
1621 attaaccttg tccgccaggc tggactaagc tatatcacac gctcttcagg ggaagtcccc
1681 tccaccagca cgcaggttgt ggttggcgat acgatgggcg agttgatgtt actgtatggc
1741 attgccgatc tcgcctttgt tggcggttca ctggttgaac gtggtgggca taatccgctg
1801 gaagctgccg cacacgctat tccggtattg atggggccgc atacttttaa ctttaaagac
1861 atttgcgcgc ggctggagca ggcaagcggg ctgattaccg ttaccgatgc cactacgctt
1921 gcaaaagagg tttcctcttt actcaccgac gccgattacc gtagtttcta tggccgtcat
1981 gccgttgaag tactgtatca aaaccagggc gcgctacagc gtctgcttca actgctggaa
2041 ccttacctgc caccgaaaac gcattgaggt tgttatgcaa aaacgggcga tttatccggg
2101 tactttcgat cccattacca atggtcatat cgatatcgtg acgcgcgcca cgcagatgtt
2161 cgatcacgtt attctggcga ttgccgccag ccccagtaaa aaaccgatgt ttaccctgga
2221 agagcgtgtg gcactggcac agcaggcaac cgcgcatctg gggaacgtgg aagtggtcgg
2281 gtttagtgat ttaatggcga acttcgcccg taatcaacac gctacggtgc tgattcgtgg
2341 cctgcgtgcg gtggcagatt ttgaatatga aatgcagctg gcgcatatga atcgccactt
2401 aatgccggaa ctggaaagtg tgtttctgat gccgtcgaaa gagtggtcgt ttatctcttc
2461 atcgttggtg aaagaggtgg cgcgccatca gggcgatgtc acccatttcc tgccggagaa
2521 tgtccatcag gcgctgatgg cgaagttagc gtagcgttta tgccggatgg tatgcgatcc
2581 ggcgcgmatg aattacttct ggcactgccg acaataaaac gttgcccgct gcgcatgttt
2641 agtcgccaca atcggcgtac cgcacacccg acacggctca ccttttcgcc cgtaaacctg
2701 caattcctga gcgaaatagc ccggtttacc atcactttgc agaaaatctt tcagcgttgt
2761 accaccctgc tcaatcgaac gcagcaacac cgctttaatc acccgagcta acaattcaca
2821 ctctgccagc gacagtgatg acgccagccg atccggatgg atcc
//