GenBank-Updates@genbank.bio.net (03/20/91)
LOCUS RICADPA 5934 bp ds-DNA PLN 20-MAR-1991 DEFINITION O.sativa ADPglucose pyrophosphorylase gene, complete cds. ACCESSION M31616 KEYWORDS ADPglucose pyrophosphorylase. SOURCE O.sativa (cv. M201) leaf DNA. ORGANISM Oryza sativa Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida; Commelinidae; Cyperales; Poaceae. REFERENCE 1 (bases 1 to 5934) AUTHORS Anderson,J.M., Larsen,R., Laudencia,D., Kim,W.T., Morrow,D., Okita,T.W. and Preiss,J. TITLE Molecular characterization of the gene encoding a rice endosperm-specific ADPglucose pyrophosphorylase subunit and its developmental pattern of transcription JOURNAL Gene 97, 199-205 (1991) STANDARD simple staff_entry COMMENT Draft entry and computer-readable sequence for [Unpublished (1990) WA State U., Inst.Biol.Chem., Pullman, WA 99164] kindly submitted by T.W.Okita, 18-JAN-1990. FEATURES Location/Qualifiers CDS join(868..1008,1744..2036,2679..2952,3067..3246, 3434..3537,3649..3760,3883..3981,4066..4185,4844..4960, 5218..5229) /note="ADPglucose pyrophosphorylase" /codon_start=868 misc_signal 242..251 /note="enhancer" misc_signal 435..442 /note="enhancer" misc_signal 659..672 /note="enhancer" misc_signal 714..726 /note="enhancer" prim_transcript 753..5417 /note="ADPglucose pyrophosphorylase mRNA and introns" exon 868..1008 /note="ADPglucose pyrophosphorylase, exon 1 (EC 2.7.7.27)" intron 1009..1743 /note="ADPglucose pyrophosphorylase intron A" exon 1744..2036 /note="ADPglucose pyrophosphorylase, exon 2" intron 2037..2678 /note="ADPglucose pyrophosphorylase intron B (no splice consensus)" exon 2679..2952 /note="ADPglucose pyrophosphorylase, exon 3" intron 2953..3066 /note="ADPglucose pyrophosphorylase intron C" exon 3067..3246 /note="ADPglucose pyrophosphorylase, exon 4" intron 3247..3433 /note="ADPglucose pyrophosphorylase intron D" exon 3434..3537 /note="ADPglucose pyrophosphorylase, exon 5" intron 3538..3648 /note="ADPglucose pyrophosphorylase intron E" exon 3649..3760 /note="ADPglucose pyrophosphorylase, exon 6" intron 3761..3882 /note="ADPglucose pyrophosphorylase intron F" exon 3883..3981 /note="ADPglucose pyrophosphorylase, exon 7" intron 3982..4065 /note="ADPglucose pyrophosphorylase intron G" exon 4066..4185 /note="ADPglucose pyrophosphorylase, exon 8" intron 4186..4843 /note="ADPglucose pyrophosphorylase intron H" exon 4844..4960 /note="ADPglucose pyrophosphorylase, exon 9" intron 4961..5217 /note="ADPglucose pyrophosphorylase intron I" exon 5218..5229 /note="ADPglucose pyrophosphorylase, exon 10" BASE COUNT 1685 a 1121 c 1111 g 1999 t 18 others ORIGIN 1 gaattctaga attatttttt aggcatgctg ttattaaaat ataaaatagt tcttgactat 61 aaataattac cacaataata tactacttca tgcattatta taattgcaat aatagtttcc 121 ttacatatat aattttaccc ttctatattt aaccacttct attataaatg tatttaaatc 181 caagtttttc tatggcatgt ggcgtgatag gagcggtcca catatatatt ttgatcatgc 241 atggtgcatt gcttgagaat aaccacatat tattgttcta aaaaaaccac atattttata 301 tgtgcaagta tgtgtcatgt gtgcatttgt gcgcgcatgt tccagaacag cagcttgcta 361 tatggcatga tcttatttgt cttgaggagc cccacacaaa ctactccatg atttgtaccc 421 acggtatagc agcttggaac agcagagatt tggcataaga acaaatttgt aaatgtaatt 481 tgtatgatat tgtagctaga ctgtttggag caaatcaatt ccgtggcgct acaaaagaat 541 ctctttttga aaaaactaaa attacaacaa aaacggcacg ctttgcaaac catggtgtaa 601 cgtttgccca caacaacctg tataagaaaa caagctttac agcttcgtac aactctggtt 661 agcaaactaa ttttgtcacg ctaaggaatc agtttctcat agcaccgacc agtttcacct 721 ataaattaga ggatactgca cagcccttga tcacaataca gtgcatttct acaatctttt 781 gttgcccatt catctgggtt ttcttctgct tctttttttt tcctagagag tacggttttc 841 tttgtaattc tttaatttgt tgcaaccatg aatgtattgg catctaagat cttcccttcc 901 cgctccaatg ttgccagcga gcaacaacaa tcgaagcgcg agaaagcaac tattgatgac 961 gctaagaact cgtccaagaa caaaaatctt gaccgcagtg tcgatgaggt aaccgatctt 1021 ccccacaaaa catattcata aataccatta cttgattttt tttatggaat tcgtcttctc 1081 ccgcgcgcgg tgtcgactcc aagagctcgc agacctcgct cgacccggac gccagcacgg 1141 tacgcgcgcc atcgcgacca cgccaccgag ggcgatggga taatttaatg gcggcgcttc 1201 tctgcacacc tcgctgcttc tctgatccgt cgtgtggttg cgttgttttg gtggggaatc 1261 tgactcgcgc ggagatggat tttttatctt ctttttcttt ttaatagttt agatgcgcaa 1321 atgcggttgg cgtcttgtcc ttccattttg gtcgttttcg tggttcctta attgtttatt 1381 tccaataaat gtggcaatcg taggattgtt agtggttgag gagtaagatt ttgtgggtgg 1441 gagagcataa gaaattggta acaacttgtc atgctctatg gtttttgggc tcttaaactg 1501 ttgcgcaatc agatcaggtg gtagctggac cattatatat cattcaaaac aattctcttc 1561 ccaaatgttt ttaatcattg aggtttgaca tagaattttc agtagtcata caccatgacc 1621 attgctttct aaggatctct aaattcaaat tgcacaataa tcttttttaa gacaagattt 1681 tgccccactc atcgtttttg ttggataatt atctctactg atgctcttct tttgttggtg 1741 cagagtgtgc ttggaatcat tcttggaggt ggtgcaggga ctagattgta tcccctcacc 1801 aagaagcgtg ccaagcctgc cgtgcctctg ggtgccaact acaggcttat tgatatccct 1861 gtcagcaact gtttgaacag caacatatcc aagatctatg tgctgacaca attcaactct 1921 gcctctctga accgtcacct gtcaagagcc tatgggaaca acattggcgg gtacaagaat 1981 gaagggttcg ttgaagtcct cgtcgcacag cagagcccag ataatcctaa ctggttcagg 2041 tatcatccaa tatcaaagtg ttttgtttga tgtcaaatgt catctacctt tggcattgca 2101 tatttctttt ccactccaaa gcattctcta taataataaa attcatcctt atcattaagt 2161 ctgatgtctt cgattctaac agtttacatt ttttaacatt gcaaattatt tcattgggaa 2221 ttttcttgac tcctgctagc atcttaaata cgattctaaa ctcaactagg catttgaaaa 2281 ctgtgaataa atttgttcca atgagtgctt ttgcatttgt cttccaagtc cgtcatgaac 2341 aagtttagtt actatttgtc aattagtata ggaaaatgat tagtgtggta tgcatactca 2401 gaattgccag tataattgtt tctcagtaag aaaaaaatca aatcatgatt catgagttga 2461 aatttagtat gcatcagaat ttcttcttta gattttgaac gctagagcat acatgcacat 2521 aatttctgct agtacgtacc aatccaggca tattattaca attctaattt gtaatgcaca 2581 ggcaacactt gtcgtttcag ttagttactg aagatggctg tgtttgtagg atcccaatct 2641 atcttataca agtactgatt ttgttttata ttctgacctc agggtactgc agatgctgta 2701 agacagtact tatggctatt tgaggagcat aatgttatgg agtttctaat tctggctgga 2761 gatcaccttt accgcatgga ctatgaaaag ttcattcagg cacacagaga aacagattct 2821 gatattactg ttgctgccct gccaatggat gagaaacgtg caactgcatt cggcctcatg 2881 aaaattgacg aggaagggag aatagttgaa tttgcagaga aaccaaaagg agaacaattg 2941 aaagcaatga tggtatgcaa atgacgtgcc tttcttgcta acttgtgata tacagtgtga 3001 gatatcagtt attacaccac atacttccat atcaaactca ttttgttgcc tattttcgtc 3061 ttgtaggttg acactaccat acttggcctt gacgacgtga gggcaaagga aatgccttat 3121 attgctagca tgggtatcta tgtgattagt aaaaatgtaa tgcttcagct cctccgtgaa 3181 caatttcctg gagctaatga ctttggaagt gaagtcattc caggtgcaac aaacatcgga 3241 atgagggtat ggaaagctcg ctgtttagta gccttttgtt ttcttcagtt tattactgct 3301 gcttttatga ttgttagcat ttgaccttct ctcactgaaa tattgtcatg gcatatgtaa 3361 taaattactt ttttattact tgtaggtcat gtgctatatt tgctgcttaa gaatctattt 3421 ttgttgtctg caggtacaag cttacttgta tgatggttac tgggaagaca ttggtaccat 3481 tgaggcattc tataatgcaa atctgggaat aacgaaaaag cctgtaccag atttcaggta 3541 tgctttcaat ttttacacct tgctgtggct gaagattatg gaatttgaag catgtgaatt 3601 tataattgtc tccttatgat ataaaatata ccatcaaaat atctgcagtt tctatgaccg 3661 gtctgctcca atttatacac aacctcgaca cttgcctcct tcgaaggttc ttgatgctga 3721 tgtgacagac agtgtcattg gtgaaggttg tgttattaaa gtaagtatgt tgtgtttgta 3781 tgttataatt caaaacctcc tgtagtttct atggtctatc tttttttaca tttccttcaa 3841 agtaatttat catgctgcaa ctttcacttt tcgtccttgt agaactgtaa gatacaccat 3901 tcagtagttg gactccggtc ctgcatttct gaaggcgcaa taatagagga ctcattactc 3961 atgggagctg actactacga ggtaaaataa gtgcatgtat aatatgcctc tgtcagagaa 4021 aataagagaa tttatccctt tctttttcct ttttctggtt accagactga agcagacaag 4081 aaactccttg gtgaaaaagg tggcattccc attggtattg ggaagaattg ccacattaga 4141 agggcaatca tcgacaagaa tgctcgtatt ggagataatg tgaaggtatt ccatattgat 4201 tttcttatcg ttaagcattt aatatgttta tatgttcttg ctttttttaa tggattttac 4261 tattcggtct ttctcatctc ttctccttta agtttctggt tcgattttac tagaagttag 4321 ttagttctta ctaataaatg gacttgcaat gatcttttat cattttgcat gcaagatggc 4381 ttatataata taattttgct ataacgatat ctttgagtgg ataaatattt tccccattgt 4441 tcttggaatg aattaatcta actataattc ctagcataaa agagaattca ggtattgata 4501 tatcacttat tgcaaacaaa aaactaaaca ctgaaagcat agaacaggac atctatgtgt 4561 gcttcgcggt gctgctaaaa accctgcgca taaccattta tgtttcatta cggatactgt 4621 tttccagatc ctgttgtttt cttacagctg gacctgcttc tgcttgtgca tgaacttctc 4681 aagacttgaa caattttatc atctaaagcc cgcaccttgt aattataaat atgctttgta 4741 ggaaaaataa ttgcattgca aaatcttgca tctctatgtt cttctaaacg taaaactgct 4801 ttctgcgtaa ctgtatgtaa caacaattga ctcatggatg cagataatca atgttgacaa 4861 tgtccaagaa gctgcaagag agactgatgg atactttatc aaaagtggca ttgttaccgt 4921 gatcaaggat gctttgctcc tagcggaaca gttatatgaa gtaagttatc catccctcta 4981 cgaacaccac tgtggctgca ggcctgcagc ttcataaacc tctgttcatt tttnnnnnaa 5041 aaattatgca acatttctag gagttggtaa gaaaaaagta agaatgcaaa tgcaacaatc 5101 aagttagaac ctgcaaactt acatgtttgg atactatgca tctaccacat tataaaacgc 5161 tctaaatatt tacatttttg gtaatcttta ttgacctgcc gttgccttgc cctgcaggta 5221 gctgcgtaat atatgatggg gcatcggcga cgagcaccag gcgggcatta taagaagaat 5281 aaaagcagtt caaggcactt tattcccttt tttttcttct gttcttcctc tattgtgtta 5341 ggataaatgt aatggtagaa gcaactgttt ttcagatgtt ttgggagtga atgataccgt 5401 gcttgaattt tccatgtttt gctttgcctc tgcttgaaaa tgaatccagc aatcccatgt 5461 gtttctaatt cgtgaagtta caaaccggta gagatgttag taatgtttcc gtgttatgat 5521 cagtcactca tcgcagcatg taaaaaacac gagatgagtc gtgccgtttg atcttaactg 5581 ggcagatcga gtttcggcga atctgccctc atccagtgcc ctcgctctnn nnnttttgtg 5641 aagggagaat tgaagccnaa tttactaata tttgaacaat ttcaatagtg tttatgttta 5701 tttggtttaa acnnnntttt gctaagcctn nnaaaaatat atcatttcaa tagttaactt 5761 aggctatttt ggtttcaatc caaacataat tttaccttgt caaggttaac catgttaaaa 5821 cttctcaaaa tttagcgttg acagaaattg gtaaggctaa gttaggcaaa aaccaaccag 5881 cccataaatt tacatcaatc tcctttgaca tttccaacct agaacattcc gtgg //