GenBank-Updates@genbank.bio.net (03/20/91)
LOCUS RICADPA 5934 bp ds-DNA PLN 20-MAR-1991
DEFINITION O.sativa ADPglucose pyrophosphorylase gene, complete cds.
ACCESSION M31616
KEYWORDS ADPglucose pyrophosphorylase.
SOURCE O.sativa (cv. M201) leaf DNA.
ORGANISM Oryza sativa
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Liliopsida;
Commelinidae; Cyperales; Poaceae.
REFERENCE 1 (bases 1 to 5934)
AUTHORS Anderson,J.M., Larsen,R., Laudencia,D., Kim,W.T., Morrow,D.,
Okita,T.W. and Preiss,J.
TITLE Molecular characterization of the gene encoding a rice
endosperm-specific ADPglucose pyrophosphorylase subunit and its
developmental pattern of transcription
JOURNAL Gene 97, 199-205 (1991)
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)
WA State U., Inst.Biol.Chem., Pullman, WA 99164] kindly submitted
by T.W.Okita, 18-JAN-1990.
FEATURES Location/Qualifiers
CDS join(868..1008,1744..2036,2679..2952,3067..3246,
3434..3537,3649..3760,3883..3981,4066..4185,4844..4960,
5218..5229)
/note="ADPglucose pyrophosphorylase"
/codon_start=868
misc_signal 242..251
/note="enhancer"
misc_signal 435..442
/note="enhancer"
misc_signal 659..672
/note="enhancer"
misc_signal 714..726
/note="enhancer"
prim_transcript 753..5417
/note="ADPglucose pyrophosphorylase mRNA and introns"
exon 868..1008
/note="ADPglucose pyrophosphorylase, exon 1 (EC 2.7.7.27)"
intron 1009..1743
/note="ADPglucose pyrophosphorylase intron A"
exon 1744..2036
/note="ADPglucose pyrophosphorylase, exon 2"
intron 2037..2678
/note="ADPglucose pyrophosphorylase intron B (no splice
consensus)"
exon 2679..2952
/note="ADPglucose pyrophosphorylase, exon 3"
intron 2953..3066
/note="ADPglucose pyrophosphorylase intron C"
exon 3067..3246
/note="ADPglucose pyrophosphorylase, exon 4"
intron 3247..3433
/note="ADPglucose pyrophosphorylase intron D"
exon 3434..3537
/note="ADPglucose pyrophosphorylase, exon 5"
intron 3538..3648
/note="ADPglucose pyrophosphorylase intron E"
exon 3649..3760
/note="ADPglucose pyrophosphorylase, exon 6"
intron 3761..3882
/note="ADPglucose pyrophosphorylase intron F"
exon 3883..3981
/note="ADPglucose pyrophosphorylase, exon 7"
intron 3982..4065
/note="ADPglucose pyrophosphorylase intron G"
exon 4066..4185
/note="ADPglucose pyrophosphorylase, exon 8"
intron 4186..4843
/note="ADPglucose pyrophosphorylase intron H"
exon 4844..4960
/note="ADPglucose pyrophosphorylase, exon 9"
intron 4961..5217
/note="ADPglucose pyrophosphorylase intron I"
exon 5218..5229
/note="ADPglucose pyrophosphorylase, exon 10"
BASE COUNT 1685 a 1121 c 1111 g 1999 t 18 others
ORIGIN
1 gaattctaga attatttttt aggcatgctg ttattaaaat ataaaatagt tcttgactat
61 aaataattac cacaataata tactacttca tgcattatta taattgcaat aatagtttcc
121 ttacatatat aattttaccc ttctatattt aaccacttct attataaatg tatttaaatc
181 caagtttttc tatggcatgt ggcgtgatag gagcggtcca catatatatt ttgatcatgc
241 atggtgcatt gcttgagaat aaccacatat tattgttcta aaaaaaccac atattttata
301 tgtgcaagta tgtgtcatgt gtgcatttgt gcgcgcatgt tccagaacag cagcttgcta
361 tatggcatga tcttatttgt cttgaggagc cccacacaaa ctactccatg atttgtaccc
421 acggtatagc agcttggaac agcagagatt tggcataaga acaaatttgt aaatgtaatt
481 tgtatgatat tgtagctaga ctgtttggag caaatcaatt ccgtggcgct acaaaagaat
541 ctctttttga aaaaactaaa attacaacaa aaacggcacg ctttgcaaac catggtgtaa
601 cgtttgccca caacaacctg tataagaaaa caagctttac agcttcgtac aactctggtt
661 agcaaactaa ttttgtcacg ctaaggaatc agtttctcat agcaccgacc agtttcacct
721 ataaattaga ggatactgca cagcccttga tcacaataca gtgcatttct acaatctttt
781 gttgcccatt catctgggtt ttcttctgct tctttttttt tcctagagag tacggttttc
841 tttgtaattc tttaatttgt tgcaaccatg aatgtattgg catctaagat cttcccttcc
901 cgctccaatg ttgccagcga gcaacaacaa tcgaagcgcg agaaagcaac tattgatgac
961 gctaagaact cgtccaagaa caaaaatctt gaccgcagtg tcgatgaggt aaccgatctt
1021 ccccacaaaa catattcata aataccatta cttgattttt tttatggaat tcgtcttctc
1081 ccgcgcgcgg tgtcgactcc aagagctcgc agacctcgct cgacccggac gccagcacgg
1141 tacgcgcgcc atcgcgacca cgccaccgag ggcgatggga taatttaatg gcggcgcttc
1201 tctgcacacc tcgctgcttc tctgatccgt cgtgtggttg cgttgttttg gtggggaatc
1261 tgactcgcgc ggagatggat tttttatctt ctttttcttt ttaatagttt agatgcgcaa
1321 atgcggttgg cgtcttgtcc ttccattttg gtcgttttcg tggttcctta attgtttatt
1381 tccaataaat gtggcaatcg taggattgtt agtggttgag gagtaagatt ttgtgggtgg
1441 gagagcataa gaaattggta acaacttgtc atgctctatg gtttttgggc tcttaaactg
1501 ttgcgcaatc agatcaggtg gtagctggac cattatatat cattcaaaac aattctcttc
1561 ccaaatgttt ttaatcattg aggtttgaca tagaattttc agtagtcata caccatgacc
1621 attgctttct aaggatctct aaattcaaat tgcacaataa tcttttttaa gacaagattt
1681 tgccccactc atcgtttttg ttggataatt atctctactg atgctcttct tttgttggtg
1741 cagagtgtgc ttggaatcat tcttggaggt ggtgcaggga ctagattgta tcccctcacc
1801 aagaagcgtg ccaagcctgc cgtgcctctg ggtgccaact acaggcttat tgatatccct
1861 gtcagcaact gtttgaacag caacatatcc aagatctatg tgctgacaca attcaactct
1921 gcctctctga accgtcacct gtcaagagcc tatgggaaca acattggcgg gtacaagaat
1981 gaagggttcg ttgaagtcct cgtcgcacag cagagcccag ataatcctaa ctggttcagg
2041 tatcatccaa tatcaaagtg ttttgtttga tgtcaaatgt catctacctt tggcattgca
2101 tatttctttt ccactccaaa gcattctcta taataataaa attcatcctt atcattaagt
2161 ctgatgtctt cgattctaac agtttacatt ttttaacatt gcaaattatt tcattgggaa
2221 ttttcttgac tcctgctagc atcttaaata cgattctaaa ctcaactagg catttgaaaa
2281 ctgtgaataa atttgttcca atgagtgctt ttgcatttgt cttccaagtc cgtcatgaac
2341 aagtttagtt actatttgtc aattagtata ggaaaatgat tagtgtggta tgcatactca
2401 gaattgccag tataattgtt tctcagtaag aaaaaaatca aatcatgatt catgagttga
2461 aatttagtat gcatcagaat ttcttcttta gattttgaac gctagagcat acatgcacat
2521 aatttctgct agtacgtacc aatccaggca tattattaca attctaattt gtaatgcaca
2581 ggcaacactt gtcgtttcag ttagttactg aagatggctg tgtttgtagg atcccaatct
2641 atcttataca agtactgatt ttgttttata ttctgacctc agggtactgc agatgctgta
2701 agacagtact tatggctatt tgaggagcat aatgttatgg agtttctaat tctggctgga
2761 gatcaccttt accgcatgga ctatgaaaag ttcattcagg cacacagaga aacagattct
2821 gatattactg ttgctgccct gccaatggat gagaaacgtg caactgcatt cggcctcatg
2881 aaaattgacg aggaagggag aatagttgaa tttgcagaga aaccaaaagg agaacaattg
2941 aaagcaatga tggtatgcaa atgacgtgcc tttcttgcta acttgtgata tacagtgtga
3001 gatatcagtt attacaccac atacttccat atcaaactca ttttgttgcc tattttcgtc
3061 ttgtaggttg acactaccat acttggcctt gacgacgtga gggcaaagga aatgccttat
3121 attgctagca tgggtatcta tgtgattagt aaaaatgtaa tgcttcagct cctccgtgaa
3181 caatttcctg gagctaatga ctttggaagt gaagtcattc caggtgcaac aaacatcgga
3241 atgagggtat ggaaagctcg ctgtttagta gccttttgtt ttcttcagtt tattactgct
3301 gcttttatga ttgttagcat ttgaccttct ctcactgaaa tattgtcatg gcatatgtaa
3361 taaattactt ttttattact tgtaggtcat gtgctatatt tgctgcttaa gaatctattt
3421 ttgttgtctg caggtacaag cttacttgta tgatggttac tgggaagaca ttggtaccat
3481 tgaggcattc tataatgcaa atctgggaat aacgaaaaag cctgtaccag atttcaggta
3541 tgctttcaat ttttacacct tgctgtggct gaagattatg gaatttgaag catgtgaatt
3601 tataattgtc tccttatgat ataaaatata ccatcaaaat atctgcagtt tctatgaccg
3661 gtctgctcca atttatacac aacctcgaca cttgcctcct tcgaaggttc ttgatgctga
3721 tgtgacagac agtgtcattg gtgaaggttg tgttattaaa gtaagtatgt tgtgtttgta
3781 tgttataatt caaaacctcc tgtagtttct atggtctatc tttttttaca tttccttcaa
3841 agtaatttat catgctgcaa ctttcacttt tcgtccttgt agaactgtaa gatacaccat
3901 tcagtagttg gactccggtc ctgcatttct gaaggcgcaa taatagagga ctcattactc
3961 atgggagctg actactacga ggtaaaataa gtgcatgtat aatatgcctc tgtcagagaa
4021 aataagagaa tttatccctt tctttttcct ttttctggtt accagactga agcagacaag
4081 aaactccttg gtgaaaaagg tggcattccc attggtattg ggaagaattg ccacattaga
4141 agggcaatca tcgacaagaa tgctcgtatt ggagataatg tgaaggtatt ccatattgat
4201 tttcttatcg ttaagcattt aatatgttta tatgttcttg ctttttttaa tggattttac
4261 tattcggtct ttctcatctc ttctccttta agtttctggt tcgattttac tagaagttag
4321 ttagttctta ctaataaatg gacttgcaat gatcttttat cattttgcat gcaagatggc
4381 ttatataata taattttgct ataacgatat ctttgagtgg ataaatattt tccccattgt
4441 tcttggaatg aattaatcta actataattc ctagcataaa agagaattca ggtattgata
4501 tatcacttat tgcaaacaaa aaactaaaca ctgaaagcat agaacaggac atctatgtgt
4561 gcttcgcggt gctgctaaaa accctgcgca taaccattta tgtttcatta cggatactgt
4621 tttccagatc ctgttgtttt cttacagctg gacctgcttc tgcttgtgca tgaacttctc
4681 aagacttgaa caattttatc atctaaagcc cgcaccttgt aattataaat atgctttgta
4741 ggaaaaataa ttgcattgca aaatcttgca tctctatgtt cttctaaacg taaaactgct
4801 ttctgcgtaa ctgtatgtaa caacaattga ctcatggatg cagataatca atgttgacaa
4861 tgtccaagaa gctgcaagag agactgatgg atactttatc aaaagtggca ttgttaccgt
4921 gatcaaggat gctttgctcc tagcggaaca gttatatgaa gtaagttatc catccctcta
4981 cgaacaccac tgtggctgca ggcctgcagc ttcataaacc tctgttcatt tttnnnnnaa
5041 aaattatgca acatttctag gagttggtaa gaaaaaagta agaatgcaaa tgcaacaatc
5101 aagttagaac ctgcaaactt acatgtttgg atactatgca tctaccacat tataaaacgc
5161 tctaaatatt tacatttttg gtaatcttta ttgacctgcc gttgccttgc cctgcaggta
5221 gctgcgtaat atatgatggg gcatcggcga cgagcaccag gcgggcatta taagaagaat
5281 aaaagcagtt caaggcactt tattcccttt tttttcttct gttcttcctc tattgtgtta
5341 ggataaatgt aatggtagaa gcaactgttt ttcagatgtt ttgggagtga atgataccgt
5401 gcttgaattt tccatgtttt gctttgcctc tgcttgaaaa tgaatccagc aatcccatgt
5461 gtttctaatt cgtgaagtta caaaccggta gagatgttag taatgtttcc gtgttatgat
5521 cagtcactca tcgcagcatg taaaaaacac gagatgagtc gtgccgtttg atcttaactg
5581 ggcagatcga gtttcggcga atctgccctc atccagtgcc ctcgctctnn nnnttttgtg
5641 aagggagaat tgaagccnaa tttactaata tttgaacaat ttcaatagtg tttatgttta
5701 tttggtttaa acnnnntttt gctaagcctn nnaaaaatat atcatttcaa tagttaactt
5761 aggctatttt ggtttcaatc caaacataat tttaccttgt caaggttaac catgttaaaa
5821 cttctcaaaa tttagcgttg acagaaattg gtaaggctaa gttaggcaaa aaccaaccag
5881 cccataaatt tacatcaatc tcctttgaca tttccaacct agaacattcc gtgg
//