GenBank-Updates@genbank.bio.net (02/22/91)
LOCUS HUMT28P 1061 bp ds-DNA PRI 22-FEB-1991
DEFINITION Human DNA from chromosome 2p- containing translocation breakpoint.
ACCESSION D90161
KEYWORDS translocation.
SOURCE Human Burkitt's lymphoma pre-B tumor cell (cell line KOBK101;
diploid) DNA, clone lambda RP-1.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 754 to 1061)
AUTHORS Kato,S.
JOURNAL Unpublished (1990)
STANDARD full staff_entry
REFERENCE 2 (bases 1 to 753)
AUTHORS Kato,S., Tachibana,K., Takayama,N., Kataoka,H., Yoshida,M.C. and
Takano,T.
TITLE Genetic recombination in a chromosomal translocation t(2;8) (p11;
q24) of a Burkitt's lymphoma cell line, KOBK101
JOURNAL Unpublished (1990)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Toshiya Takano
Dept. Microbiol.
Keio University School of Medicine
35 Shinanomachi
Shinjuku-ku
Tokyo 160
Japan
Phone: 03-353-1211 x2690
Fax: 03-353-0145
There is a termination codon in the V kappa segment.
FEATURES Location/Qualifiers
CDS <246..>595
/pseudo
/partial
/note="Ig kappa-chain V(II)-J4-region"
misc_feature 693..694
/note="translocation breakpoint"
repeat_region 694..952
/note="Alu element"
repeat_region 953..960
/note="direct repeat of Alu element"
BASE COUNT 270 a 256 c 233 g 302 t
ORIGIN Chromosome 2p-; 1 bp upstream of EcoRI site.
1 gaattcatat tttgccctga tgatgatttg aaaactccta aaagcagtgc tctgaataat
61 atcttgagaa atgaaagaac tcttgtgcct atttaataaa gggttcattt aaaattttgt
121 ttttgtgata tgaatacaaa tttgtcaaaa taaaaaatta gccataaatc aatatcataa
181 ggcaaatctc aaaagttgtt cattatgctt tcacataacc ttgcacttct ctctcataat
241 ttcaggatcc agtgcggatg ttgtgatgac ccagactcca ctctctctgt ccgtcacccc
301 tggacagccg gcctccatct cctgcaagtc tattcagagc ctcctgcata gtgatggaaa
361 gacctatttg tattgatacc tacaaaagcc aggccagtct ccacagctcc taatctatga
421 agtttccagc cggttctctg gagtgccaga taggttcagt ggcagcgggt cagggacaga
481 tttcacactg aaaatcagcc gggtggaggc tgaggatgtg ggggtttatt actgcatgca
541 aggtatacac cttcctctca ctttcggcgg agggaccaag gtggagatca aacgtaagtg
601 cactttccta atgctttttc taataaggtt taattttgga gcgtttttgt gtttgagata
661 ttagctcagg tcaattccaa agagtaccag attgcccagg ctggagtgca gtggtatgat
721 cttggctcac tgcaacctcc gcctcccgga ttcaagcaat tatcctgcct cagcctccca
781 agtagctgag attacaggca tgtgccacca tgcctgggta atttttgtat tcttagtaga
841 gatggggttt caccatgttg gccagactgg tctcgaactc ttgacctcat gatccacctg
901 cctcagcctc ccaaagtgct gggattacag gcgtgagcca ccataccctg tgcccctgtc
961 ttactgaaga gggaaccgag gcttccttag agagggagag gaccctcctg ggaaactttc
1021 atcccacctg ctccttctac cccagtgcac tgctggagct c
//GenBank-Updates@genbank.bio.net (03/20/91)
LOCUS HUMT28P 1061 bp ds-DNA PRI 20-MAR-1991
DEFINITION Human DNA from chromosome 2p- containing translocation breakpoint.
ACCESSION D90161
KEYWORDS translocation.
SOURCE Human Burkitt's lymphoma pre-B tumor cell (cell line KOBK101;
diploid) DNA, clone lambda RP-1.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 754 to 1061)
AUTHORS Kato,S.
JOURNAL Unpublished (1990)
STANDARD full staff_entry
REFERENCE 2 (bases 1 to 753)
AUTHORS Kato,S., Tachibana,K., Takayama,N., Kataoka,H., Yoshida,M.C. and
Takano,T.
TITLE Genetic recombination in a chromosomal translocation t(2;8)(p11;
q24) of a burkitt's lymphoma cell line KOBK10
JOURNAL Gene 97, 239-244 (1991)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Toshiya Takano
Dept. Microbiol.
Keio University School of Medicine
35 Shinanomachi
Shinjuku-ku
Tokyo 160
Japan
Phone: 03-353-1211 x2690
Fax: 03-353-0145
There is a termination codon in the V kappa segment.
FEATURES Location/Qualifiers
CDS <246..>595
/partial
/pseudo
/note="Ig kappa-chain V(II)-J4-region"
misc_feature 693..694
/note="translocation breakpoint"
repeat_region 694..952
/note="Alu element"
repeat_region 953..960
/note="direct repeat of Alu element"
BASE COUNT 270 a 256 c 233 g 302 t
ORIGIN Chromosome 2p-; 1 bp upstream of EcoRI site.
1 gaattcatat tttgccctga tgatgatttg aaaactccta aaagcagtgc tctgaataat
61 atcttgagaa atgaaagaac tcttgtgcct atttaataaa gggttcattt aaaattttgt
121 ttttgtgata tgaatacaaa tttgtcaaaa taaaaaatta gccataaatc aatatcataa
181 ggcaaatctc aaaagttgtt cattatgctt tcacataacc ttgcacttct ctctcataat
241 ttcaggatcc agtgcggatg ttgtgatgac ccagactcca ctctctctgt ccgtcacccc
301 tggacagccg gcctccatct cctgcaagtc tattcagagc ctcctgcata gtgatggaaa
361 gacctatttg tattgatacc tacaaaagcc aggccagtct ccacagctcc taatctatga
421 agtttccagc cggttctctg gagtgccaga taggttcagt ggcagcgggt cagggacaga
481 tttcacactg aaaatcagcc gggtggaggc tgaggatgtg ggggtttatt actgcatgca
541 aggtatacac cttcctctca ctttcggcgg agggaccaag gtggagatca aacgtaagtg
601 cactttccta atgctttttc taataaggtt taattttgga gcgtttttgt gtttgagata
661 ttagctcagg tcaattccaa agagtaccag attgcccagg ctggagtgca gtggtatgat
721 cttggctcac tgcaacctcc gcctcccgga ttcaagcaat tatcctgcct cagcctccca
781 agtagctgag attacaggca tgtgccacca tgcctgggta atttttgtat tcttagtaga
841 gatggggttt caccatgttg gccagactgg tctcgaactc ttgacctcat gatccacctg
901 cctcagcctc ccaaagtgct gggattacag gcgtgagcca ccataccctg tgcccctgtc
961 ttactgaaga gggaaccgag gcttccttag agagggagag gaccctcctg ggaaactttc
1021 atcccacctg ctccttctac cccagtgcac tgctggagct c
//