GenBank-Updates@genbank.bio.net (03/28/91)
LOCUS HUMA5CL18 1542 bp ds-DNA PRI 28-MAR-1991
DEFINITION Human alpha-5 collagen type IV gene, exon 1.
ACCESSION M63473
KEYWORDS alpha-5 type IV collagen.
SEGMENT 18 of 18
SOURCE Human DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 1542)
AUTHORS Zhou,J., Hostikka,S.L., Chow,L.T. and Tryggvason,K.
TITLE Characterization of the 3' half of the human type IV collagen
alpha-5 gene that is affected in the Alport syndrome
JOURNAL Genomics 9, 1-9 (1991)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS join(M63455:31..180,M63456:31..129,M63457:31..120,
M63458:31..170,M63459:1..127,M63460:31..111,
M63461:31..129,M63462:31..81,M63463:31..216,
M63464:31..164,M63465:31..103,M63465:237..308,
M63466:31..159,M63467:31..129,M63468:31..243,
M63470:31..208,M63471:31..145,M63472:31..203,31..112)
/product="alpha-5 collagen type IV"
/codon_start=33
/partial
exon 31..1275
/number=1
/product="alpha-5 collagen type IV"
BASE COUNT 500 a 266 c 238 g 538 t
ORIGIN About 0.9 kb after segment 17.
1 gatctgattg tcttatttct tatttcccag taaacctcag tcagaaacgc tgaaagcagg
61 agacttgagg acacgaatta gccgatgtca agtgtgcatg aagaggacat aacattttga
121 agaattcctt ttgtgtttta aaatgtgata tatatatata taaaattcct aggatgcagt
181 gtctcattgt ccccaacttt actactgctg ccgtcaatgg tgctactata tatgatcaag
241 ataacatgct gactagtaac catgaagatt cagatgtacc tcagcaatgc gccagagcaa
301 agtctctatt atttttctac taaagaaata aggaagtgaa tttacttttt gggtccagaa
361 tgactttctc caagaattat aagatgaaaa ttatatattt tgcccagtta ctaaaatggt
421 acattaaaaa ttcaattaag agaagagtca cattgagtaa aataaaagac tgcagtttgt
481 gggaagaatt atttttcacg gtgctactaa tcctgctgta tcccgggttt ttaatataaa
541 ggtgttaagc ttattttgct ttgtaagtaa agaatgtgta tattgtgaac agccttttag
601 ctcaaaatgt tgagtcattt acatatgaca tagcatgaat cactctttac agaaaatgta
661 ggaaacccta gaatacagac agcaatattt tatattcatg tttatcaaag tgagaggact
721 tatattccta catcaagtta ctactgagag taaatttatt ttgagtttta tcccgtaagt
781 tctgttttga ttttttttaa aaaacaaacc cttttagtca ctttaatcag aattttaaat
841 gttcatgtta cataccaaat tataatatct aatggagcaa tttgtctttt gctatattct
901 ccaagattat ctcttaagac catatgcccc ctgttttaat gtttcttaca tcttgttttt
961 actcatttct gactggacaa agttcttcca aacaattctg agaaacaaaa acacacacgc
1021 agaattaaca attcttttcc ctgtgcttct tatgtaagaa tcctcctgtg gcctctgctt
1081 gtacagaact gggaaacaac acttggttag tctcttttaa gttacaaaaa gccaattgat
1141 gtttcttatt ctttttaaat tttaaatatt ttgttataaa tactcacagg ataccttatt
1201 tccctagcta tcatctcctg acttaatgtt ttttaaaccc accaatataa atttaattaa
1261 agatatatgt tgtaaggatg gtctgttgtg tatctcttca gcctgtgtgg aaaaaacccc
1321 tgctcattta cagatgatta ccaatctgca catcaacaag tatctcttcc cagggaatca
1381 gtttctccac gctttgatca ctctgttagt agatagaaaa catatagtaa tgtaaacttt
1441 ttccaatgaa gaaaactacc tattggaaga catttccaag ataataaatt tcttgacaac
1501 attgtgttaa tggctaagaa aggaaacaac tggcttctat tt
//