GenBank-Updates@genbank.bio.net (03/01/91)
LOCUS IPNVP1JAS 2784 bp ds-RNA VRL 01-MAR-1991
DEFINITION Infectious pancreatic necrosis virus (Jasper serotype) VP1 gene,
complete cds.
ACCESSION M58756
KEYWORDS GTP-binding protein; RNA dependent RNA polymerase; VP1; viral
protein 1.
SOURCE Infectious pancreatic necrosis virus (Jasper serotype), cDNA to
genomic RNA.
ORGANISM Infectious pancreatic necrosis virus
Viridae; ds-RNA nonenveloped viruses; Birnaviridae.
REFERENCE 1 (bases 1 to 2784)
AUTHORS Duncan,R., Mason,C.L., Nagy,E., Leong,J.-A. and Dobos,P.
TITLE Sequence analysis of infectious pancreatic necrosis virus genome
segment B and its encoded VPI protein: A putative RNA-dependent RNA
polymerase lacking the Gly-Asp-Asp motif
JOURNAL Virology (1990) In press
STANDARD full staff_review
FEATURES Location/Qualifiers
CDS 101..2638
/standard_name="VP1"
/note="putative RNA-dependent RNA polymerase"
/product="viral protein 1"
/codon_start=101
BASE COUNT 860 a 813 c 688 g 423 t
ORIGIN Segment B.
1 ggaaacagtg ggtcaacgtt ggtggcaccc gacataccac gactgtttac gtatgcacgc
61 aagtgccctt taacaaaacc ctatacacac aactcatgat atgtcggaca tcttcaactc
121 accacaaaac aaggcatcca tcttgactgc tctgatgaag agcacaacag gagacgtaga
181 ggacgtgctg ataccaaaac gcttcaggcc agccaaggac cccctcgaca gcccgcaagc
241 agcagcacag ttcctgaagg acaacaagta ccggatactt aggccgcgag ccatcccgac
301 catggtcgaa ctagagacag atgccgctct gcctcgactg cgacaaatgg tggaagacgg
361 caagcttaag gacacggtaa gcgtcccaga aggaaccact gcgttctacc caaagtacta
421 cccattccac aagccagacc atgacgaagt ggggacgttc ggggctccgg acatcacact
481 tctgaagcaa ctcaccttct tcctgttgga gaatgacttc ccaacaggac cggagacgct
541 cagacaagtc cgagaagcca tagccacact tcagtacggc tcaggcagct actcaggaca
601 gctgaacagg ctcctagcaa tgaagggcgt cgccactggc aggaatccaa acaagactcc
661 aaaaacagtg ggctacacga acgaacagct agcaaaactg ctggagcaaa cactaccgat
721 caacacacca aagcatgagg accccgacct ccggtgggcc ccaagctggc tgatcaacta
781 caccggagac ctgagcacag acaagtcata tctgccacat gtgaccataa agtcctcagc
841 cggcctacca tacataggca aaaccaaagg agacacgacg gcagaagcgc tcgtactggc
901 tgactccttc atacgtgacc tcggaagagc cgccacatca gcagacccag aagcaggtgt
961 gaagaaaacc atcaccgact tctggtacct gagctgtggg ctgctcttcc caaagggcga
1021 aagatacaca caagtggact gggacaagaa gaccagaaac atttggagcg cgccctaccc
1081 aacacaccta ctactatcaa tggtgtcaac cccggtgatg aacgagtcca aactcaacat
1141 caccaacacc cagaccccgt ctctgtacgg gttctcacca ttccacggag gaatggacag
1201 aatcatgaca atcataagag acagcctgga caatgacgag gacctagtca tgatctatgc
1261 ggacaacatc tacatactgc aggacaacac atggtactca attgacctgg agaaaggcga
1321 ggccaactgc actccacagc acatgcaggc catgatgtac tacctcctga cgaggggatg
1381 gacgaacgag gacggctcac cgcgatacaa cccgacatgg gccacattcg caatgaacgt
1441 cgctccatcc atggtggtgg actcatcgtg tcttttgatg aaccttcaac tgaagaccta
1501 cggccagggc agtgggaatg cctttacatt cctgaacaac cacctcatgt ccacaatagt
1561 cgtggccgag tgggtaaaag cagggaaacc aaaccccatg accaaagagt tcatggacct
1621 cgaggagaaa acgggcatca acttcaagat agagcgcgag ctgaaaaacc ttagagagac
1681 catcgttgag gccgtcgaga cggcacccca ggatggatac ctcgccgatg ggtccgacct
1741 accccccatc agaccaggaa aagcagtaga gcttgacctg ctcgggtggt cggccatcta
1801 cagccgccaa atggagatgt tcgttccagt cctcgagaac gagagactaa ttgcctcagc
1861 agcctaccca aaggggctcg agaacaaagc cctggccaga aaacccggag ccgagattgc
1921 gtaccagata gtgcggtacg aggcaatcag gctggtaggc ggctggaaca atccgctact
1981 agagaccgcg gccaaacaca tgtccctcga caagaggaag agactggaag tgaaggggat
2041 agacgtcacc ggattcctcg atgactggaa caacatgtcc gaattcggag gagacctaga
2101 aggaataacg ctatcagaac ccctaacaaa ccaaacactt gttgacatca acacgccgct
2161 ggacagcttt gaccccaagg caagacccca aacacccagg tctccaaaga agactctaga
2221 cgaggtgact acggccatca cctcgggcac atacaaggac cccaaaagcg ctgtgtggcg
2281 actgctagac cagaggacca aactccgagt cagcacacta cgagatcaag cactagcgct
2341 aaaacccgcg tcgtcctcgg tggacaactg ggccgaagcc actgaggaac tggcacaaca
2401 gcaacagcta ctcatgaagg ccaacaatct gctgaagagc agcctgacgg agacaagaga
2461 agcactggag accatccagt cagacaaaat catcgcaggg aaatccaacc ccgagaagaa
2521 cccggggacc gcagccaacc cagtcgttgg ctacggggaa ttcagtgaga agattcctct
2581 gacccccacg cagaaaaaga atgccaagcg gagggaaaag cagagaagaa accagtaaga
2641 agacccaaac cgggaagaat ccgaaatgaa tcagctggac tcatatgaaa gctccgcgcc
2701 gcacggcaag ctggacaaaa gtagtgaccc gacaacgtgc caccaacatg acccctgaaa
2761 acatccggtt ccgccaggga cccc
//GenBank-Updates@genbank.bio.net (03/01/91)
LOCUS IPNVP1SP 2630 bp ds-RNA VRL 01-MAR-1991
DEFINITION Infectious pancreatic necrosis virus (Sp serotype) VP1 gene,
complete cds.
ACCESSION M58757
KEYWORDS GTP-binding protein; RNA dependent RNA polymerase; VP1; viral
protein 1.
SOURCE Infectious pancreatic necrosis virus (Sp serotype), cDNA to genomic
RNA.
ORGANISM Infectious pancreatic necrosis virus
Viridae; ds-RNA nonenveloped viruses; Birnaviridae.
REFERENCE 1 (bases 1 to 2630)
AUTHORS Duncan,R., Mason,C.L., Nagy,E., Leong,J.-A. and Dobos,P.
TITLE Sequence analysis of infectious pancreatic necrosis virus genome
segment B and its encoded VPI protein: A putative RNA-dependent RNA
polymerase lacking the Gly-Asp-Asp motif
JOURNAL Virology (1990) In press
STANDARD full staff_review
FEATURES Location/Qualifiers
CDS 94..2628
/standard_name="VP1"
/note="putative RNA-dependent RNA polymerase"
/product="viral protein 1"
/codon_start=94
BASE COUNT 786 a 764 c 639 g 441 t
ORIGIN Segment B.
1 gtgggtcaac gttggtggca cccgacatac cacgactgtt tatgtatgca cgcgagtgcc
61 cttttaaaac ctctacaata tacaacttat gatatgtcgg acatcttcaa ctcacctcaa
121 aacaaggctt ctatcttgaa tgcactcatg aagagcacgc agggagacgt ggaggatgtt
181 ctaataccca agcggtttag acccgcaaag gatccgttag atagccccca ggctgcagcc
241 gcgttcctga aagaacacaa gtatcggata cttaggccgc gagccatacc caccatggtt
301 gaaatagaga cggatgccgc tctgcctcga ctagcggcca tggtggacga tggcaagctt
361 aaggaaatgg tcaatgttcc cgaaggaaca accgcgttct acccaaaata ctacccattc
421 cacagacccg accatgacga cgtgggaacg tttggggctc cagacatcac actactcaaa
481 caactgacgt tcttcctgct ggagaatgac tttccaactg gtccagagac cctaagacaa
541 gtcagagaag caatcgcaac cctgcaatac gggtccggca gctactcagg acaactcaac
601 aggctactgg caatgaaggg cgtcgccacg gggaggaatc ccaacaagac tccactggcc
661 gttggctaca ccaacgagca gatggcaaga ctgatggagc aaaccttgcc tatcaaccct
721 ccaaagaatg aggacccaga cctccgatgg gccccaagct ggttgataca gtacaccgga
781 gacgcatcaa ctgacaagtc atatctccct catgtgacag ctaagtcatc tgccggccta
841 ccctacatag gcaaaaccaa aggagacacc acggccgaag ccctggtgct ggcagactcc
901 ttcataaggg acctcggaaa agccgcaaca tcagccgacc caggggcggc agctaagaaa
961 gtactgtccg acttctggta cctcagctgc ggtctgctct tcccaaaagg ggagagatac
1021 acacagaaag actgggactt gaagaccagg aacatctgga gtgcccccta tccaacgcac
1081 ctactactat caatggtgtc gtcaccggtg atggatgagt ccaaactcaa catcaccaac
1141 actcagaccc cttctctgta cgggttctca ccatttcacg gtgggatcaa cagaatcatg
1201 accatcatca gagagcatct ggatcaagag caggacctag tcatgatata tgccgacaac
1261 atatacatac tacaggacaa cacctggtac tccatcgatc tagaaaaggg agaagcaaac
1321 tgcacaccac aacacatgca ggcaatgatg tactaccgtc tcacacgcga atggacaaac
1381 gaggacggct caccacggta caacccgacg tgggcaacat tcgccatgta cgttgggccc
1441 tcaatggtag tggactcaac ctgcctgctg atgaatctgc agctgaagac tacgggccaa
1501 ggcagtggga atgccttcac cttcctcaac aaccatctca tgtccacaat tgtggtcgcg
1561 gagtggcaca aggcaggaag gccaaatccc atgtccaaag aattcatgga cctcgaagca
1621 aagacgggga tcaacttcaa aatcgagcgc gagctgaaag acctaaggtc gatcatcatg
1681 gaggcggtag acaccgcccc actcgacggc tatctagccg acgggtccga cctgccaccc
1741 agggtgccag ggaaggcggt ggagctcgac cttctaggat ggtccgcagt gtacagccga
1801 caactcgaga tgttcgtccc cgtccttgaa aacgaaagac taattgcatc agtcgcctac
1861 ccaaaagggc tagagaacaa atccctagct cgaaaacccg gggccgagat cgcataccaa
1921 atagtaaggt atgaagcgat tcggctcatc ggaggctgga acaatccact catcgaaaca
1981 gcagcaaaac acatgtccct ggacaaaagg aagagactgg aggtaaaagg catcgacgtc
2041 accggattcc tagacgactg gaacaccatg tcggagttcg gaggcgatct ggagggtatc
2101 tcactaacag ctcccctcac aaaccagacc ctcctagaca tcaacacacc agagaccgag
2161 ttcgacgtca aagacagacc ccccacgccg cgctccccag gcaaaaccct cgccgaggta
2221 accgcagcga taacatcagg gacctacaaa gaccccaaaa gtgcagtgtg gaggctcctc
2281 gaccagagga ccaaactacg cgtgagcacc ctacgcgatc acgcgcacgc gctaaaaccc
2341 gcagcgtcaa catccgactt ctggggggac gccacagaag aactcgccga acaacaacaa
2401 ctgctgatga aagcgaacaa cctgctaaag agcagcctca cggaagcgag ggaagccctc
2461 gaaaccgtgc agtcagataa aataatctca ggcaaaacct ctccagagaa gaatcccggg
2521 accgccgcaa accccgtggt ggcgtatgga gagttcagcg agaaaattcc tctcactccc
2581 acgcaaaaga agaacgccaa gcgtcgggag aagcagagaa gaaactaaga
//GenBank-Updates@genbank.bio.net (03/30/91)
LOCUS IPNVP1JAS 2784 bp ds-RNA VRL 30-MAR-1991
DEFINITION Infectious pancreatic necrosis virus (Jasper serotype) VP1 gene,
complete cds.
ACCESSION M58756
KEYWORDS GTP-binding protein; RNA dependent RNA polymerase; VP1;
viral protein 1.
SOURCE Infectious pancreatic necrosis virus (Jasper serotype), cDNA to
genomic RNA.
ORGANISM Infectious pancreatic necrosis virus
Viridae; ds-RNA nonenveloped viruses; Birnaviridae.
REFERENCE 1 (bases 1 to 2784)
AUTHORS Duncan,R., Mason,C.L., Nagy,E., Leong,J.-A. and Dobos,P.
TITLE Sequence analysis of infectious pancreatic necrosis virus genome
segment B and its encoded VP1 protein: A putative RNA-dependent RNA
polymerase lacking the Gly-Asp-Asp motif
JOURNAL Virology 181, 541-552 (1991)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 101..2638
/standard_name="VP1"
/note="putative RNA-dependent RNA polymerase"
/product="viral protein 1"
/codon_start=101
BASE COUNT 860 a 813 c 688 g 423 t
ORIGIN Segment B.
1 ggaaacagtg ggtcaacgtt ggtggcaccc gacataccac gactgtttac gtatgcacgc
61 aagtgccctt taacaaaacc ctatacacac aactcatgat atgtcggaca tcttcaactc
121 accacaaaac aaggcatcca tcttgactgc tctgatgaag agcacaacag gagacgtaga
181 ggacgtgctg ataccaaaac gcttcaggcc agccaaggac cccctcgaca gcccgcaagc
241 agcagcacag ttcctgaagg acaacaagta ccggatactt aggccgcgag ccatcccgac
301 catggtcgaa ctagagacag atgccgctct gcctcgactg cgacaaatgg tggaagacgg
361 caagcttaag gacacggtaa gcgtcccaga aggaaccact gcgttctacc caaagtacta
421 cccattccac aagccagacc atgacgaagt ggggacgttc ggggctccgg acatcacact
481 tctgaagcaa ctcaccttct tcctgttgga gaatgacttc ccaacaggac cggagacgct
541 cagacaagtc cgagaagcca tagccacact tcagtacggc tcaggcagct actcaggaca
601 gctgaacagg ctcctagcaa tgaagggcgt cgccactggc aggaatccaa acaagactcc
661 aaaaacagtg ggctacacga acgaacagct agcaaaactg ctggagcaaa cactaccgat
721 caacacacca aagcatgagg accccgacct ccggtgggcc ccaagctggc tgatcaacta
781 caccggagac ctgagcacag acaagtcata tctgccacat gtgaccataa agtcctcagc
841 cggcctacca tacataggca aaaccaaagg agacacgacg gcagaagcgc tcgtactggc
901 tgactccttc atacgtgacc tcggaagagc cgccacatca gcagacccag aagcaggtgt
961 gaagaaaacc atcaccgact tctggtacct gagctgtggg ctgctcttcc caaagggcga
1021 aagatacaca caagtggact gggacaagaa gaccagaaac atttggagcg cgccctaccc
1081 aacacaccta ctactatcaa tggtgtcaac cccggtgatg aacgagtcca aactcaacat
1141 caccaacacc cagaccccgt ctctgtacgg gttctcacca ttccacggag gaatggacag
1201 aatcatgaca atcataagag acagcctgga caatgacgag gacctagtca tgatctatgc
1261 ggacaacatc tacatactgc aggacaacac atggtactca attgacctgg agaaaggcga
1321 ggccaactgc actccacagc acatgcaggc catgatgtac tacctcctga cgaggggatg
1381 gacgaacgag gacggctcac cgcgatacaa cccgacatgg gccacattcg caatgaacgt
1441 cgctccatcc atggtggtgg actcatcgtg tcttttgatg aaccttcaac tgaagaccta
1501 cggccagggc agtgggaatg cctttacatt cctgaacaac cacctcatgt ccacaatagt
1561 cgtggccgag tgggtaaaag cagggaaacc aaaccccatg accaaagagt tcatggacct
1621 cgaggagaaa acgggcatca acttcaagat agagcgcgag ctgaaaaacc ttagagagac
1681 catcgttgag gccgtcgaga cggcacccca ggatggatac ctcgccgatg ggtccgacct
1741 accccccatc agaccaggaa aagcagtaga gcttgacctg ctcgggtggt cggccatcta
1801 cagccgccaa atggagatgt tcgttccagt cctcgagaac gagagactaa ttgcctcagc
1861 agcctaccca aaggggctcg agaacaaagc cctggccaga aaacccggag ccgagattgc
1921 gtaccagata gtgcggtacg aggcaatcag gctggtaggc ggctggaaca atccgctact
1981 agagaccgcg gccaaacaca tgtccctcga caagaggaag agactggaag tgaaggggat
2041 agacgtcacc ggattcctcg atgactggaa caacatgtcc gaattcggag gagacctaga
2101 aggaataacg ctatcagaac ccctaacaaa ccaaacactt gttgacatca acacgccgct
2161 ggacagcttt gaccccaagg caagacccca aacacccagg tctccaaaga agactctaga
2221 cgaggtgact acggccatca cctcgggcac atacaaggac cccaaaagcg ctgtgtggcg
2281 actgctagac cagaggacca aactccgagt cagcacacta cgagatcaag cactagcgct
2341 aaaacccgcg tcgtcctcgg tggacaactg ggccgaagcc actgaggaac tggcacaaca
2401 gcaacagcta ctcatgaagg ccaacaatct gctgaagagc agcctgacgg agacaagaga
2461 agcactggag accatccagt cagacaaaat catcgcaggg aaatccaacc ccgagaagaa
2521 cccggggacc gcagccaacc cagtcgttgg ctacggggaa ttcagtgaga agattcctct
2581 gacccccacg cagaaaaaga atgccaagcg gagggaaaag cagagaagaa accagtaaga
2641 agacccaaac cgggaagaat ccgaaatgaa tcagctggac tcatatgaaa gctccgcgcc
2701 gcacggcaag ctggacaaaa gtagtgaccc gacaacgtgc caccaacatg acccctgaaa
2761 acatccggtt ccgccaggga cccc
//GenBank-Updates@genbank.bio.net (03/30/91)
LOCUS IPNVP1SP 2630 bp ds-RNA VRL 30-MAR-1991
DEFINITION Infectious pancreatic necrosis virus (Sp serotype) VP1 gene,
complete cds.
ACCESSION M58757
KEYWORDS GTP-binding protein; RNA dependent RNA polymerase; VP1;
viral protein 1.
SOURCE Infectious pancreatic necrosis virus (Sp serotype), cDNA to genomic
RNA.
ORGANISM Infectious pancreatic necrosis virus
Viridae; ds-RNA nonenveloped viruses; Birnaviridae.
REFERENCE 1 (bases 1 to 2630)
AUTHORS Duncan,R., Mason,C.L., Nagy,E., Leong,J.-A. and Dobos,P.
TITLE Sequence analysis of infectious pancreatic necrosis virus genome
segment B and its encoded VP1 protein: A putative RNA-dependent RNA
polymerase lacking the Gly-Asp-Asp motif
JOURNAL Virology 181, 541-552 (1991)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 94..2628
/standard_name="VP1"
/note="putative RNA-dependent RNA polymerase"
/product="viral protein 1"
/codon_start=94
BASE COUNT 786 a 764 c 639 g 441 t
ORIGIN Segment B.
1 gtgggtcaac gttggtggca cccgacatac cacgactgtt tatgtatgca cgcgagtgcc
61 cttttaaaac ctctacaata tacaacttat gatatgtcgg acatcttcaa ctcacctcaa
121 aacaaggctt ctatcttgaa tgcactcatg aagagcacgc agggagacgt ggaggatgtt
181 ctaataccca agcggtttag acccgcaaag gatccgttag atagccccca ggctgcagcc
241 gcgttcctga aagaacacaa gtatcggata cttaggccgc gagccatacc caccatggtt
301 gaaatagaga cggatgccgc tctgcctcga ctagcggcca tggtggacga tggcaagctt
361 aaggaaatgg tcaatgttcc cgaaggaaca accgcgttct acccaaaata ctacccattc
421 cacagacccg accatgacga cgtgggaacg tttggggctc cagacatcac actactcaaa
481 caactgacgt tcttcctgct ggagaatgac tttccaactg gtccagagac cctaagacaa
541 gtcagagaag caatcgcaac cctgcaatac gggtccggca gctactcagg acaactcaac
601 aggctactgg caatgaaggg cgtcgccacg gggaggaatc ccaacaagac tccactggcc
661 gttggctaca ccaacgagca gatggcaaga ctgatggagc aaaccttgcc tatcaaccct
721 ccaaagaatg aggacccaga cctccgatgg gccccaagct ggttgataca gtacaccgga
781 gacgcatcaa ctgacaagtc atatctccct catgtgacag ctaagtcatc tgccggccta
841 ccctacatag gcaaaaccaa aggagacacc acggccgaag ccctggtgct ggcagactcc
901 ttcataaggg acctcggaaa agccgcaaca tcagccgacc caggggcggc agctaagaaa
961 gtactgtccg acttctggta cctcagctgc ggtctgctct tcccaaaagg ggagagatac
1021 acacagaaag actgggactt gaagaccagg aacatctgga gtgcccccta tccaacgcac
1081 ctactactat caatggtgtc gtcaccggtg atggatgagt ccaaactcaa catcaccaac
1141 actcagaccc cttctctgta cgggttctca ccatttcacg gtgggatcaa cagaatcatg
1201 accatcatca gagagcatct ggatcaagag caggacctag tcatgatata tgccgacaac
1261 atatacatac tacaggacaa cacctggtac tccatcgatc tagaaaaggg agaagcaaac
1321 tgcacaccac aacacatgca ggcaatgatg tactaccgtc tcacacgcga atggacaaac
1381 gaggacggct caccacggta caacccgacg tgggcaacat tcgccatgta cgttgggccc
1441 tcaatggtag tggactcaac ctgcctgctg atgaatctgc agctgaagac tacgggccaa
1501 ggcagtggga atgccttcac cttcctcaac aaccatctca tgtccacaat tgtggtcgcg
1561 gagtggcaca aggcaggaag gccaaatccc atgtccaaag aattcatgga cctcgaagca
1621 aagacgggga tcaacttcaa aatcgagcgc gagctgaaag acctaaggtc gatcatcatg
1681 gaggcggtag acaccgcccc actcgacggc tatctagccg acgggtccga cctgccaccc
1741 agggtgccag ggaaggcggt ggagctcgac cttctaggat ggtccgcagt gtacagccga
1801 caactcgaga tgttcgtccc cgtccttgaa aacgaaagac taattgcatc agtcgcctac
1861 ccaaaagggc tagagaacaa atccctagct cgaaaacccg gggccgagat cgcataccaa
1921 atagtaaggt atgaagcgat tcggctcatc ggaggctgga acaatccact catcgaaaca
1981 gcagcaaaac acatgtccct ggacaaaagg aagagactgg aggtaaaagg catcgacgtc
2041 accggattcc tagacgactg gaacaccatg tcggagttcg gaggcgatct ggagggtatc
2101 tcactaacag ctcccctcac aaaccagacc ctcctagaca tcaacacacc agagaccgag
2161 ttcgacgtca aagacagacc ccccacgccg cgctccccag gcaaaaccct cgccgaggta
2221 accgcagcga taacatcagg gacctacaaa gaccccaaaa gtgcagtgtg gaggctcctc
2281 gaccagagga ccaaactacg cgtgagcacc ctacgcgatc acgcgcacgc gctaaaaccc
2341 gcagcgtcaa catccgactt ctggggggac gccacagaag aactcgccga acaacaacaa
2401 ctgctgatga aagcgaacaa cctgctaaag agcagcctca cggaagcgag ggaagccctc
2461 gaaaccgtgc agtcagataa aataatctca ggcaaaacct ctccagagaa gaatcccggg
2521 accgccgcaa accccgtggt ggcgtatgga gagttcagcg agaaaattcc tctcactccc
2581 acgcaaaaga agaacgccaa gcgtcgggag aagcagagaa gaaactaaga
//