GenBank-Updates@genbank.bio.net (04/03/91)
LOCUS HPCST77 2610 bp ss-RNA VRL 03-APR-1991
DEFINITION Hepatitis C virus structural gene, 5' end.
ACCESSION M62381
KEYWORDS structural gene.
SOURCE Hepatitis C virus (Human patient 'H') 1977 isolate, RNA.
ORGANISM Hepatitis C virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Togaviridae incertae sedis.
REFERENCE 1 (bases 1 to 2610)
AUTHORS Ogata,N., Alter,H.J., Miller,R.H. and Purcell,R.H.
TITLE Nucleotide sequence and mutation rate of the H strain of Hepatitis
C virus
JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1991) In press
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 1816..>2610
/codon_start=1816
BASE COUNT 483 a 786 c 763 g 578 t
ORIGIN
1 acgcagaaag cgtctagcca tggcgttagt atgagtgtcg tgcagcctcc aggacccccc
61 ctcccgggag agccatagtg gtctgcggaa ccggtgagta caccggaatt gccaggacga
121 ccgggtcctt tcttggataa acccgctcaa tgcctggaga tttgggcgtg cccccgcaag
181 actgctagcc gagtagtgtt gggtcgcgaa aggccttgtg gtactgcctg atagggtgct
241 tgcgagtgcc ccgggaggtc tcgtagaccg tgcaccatga gcacgaatcc taaacctcaa
301 agaaaaacca aacgtaacac caaccgtcgc ccacaggacg tcaagttccc gggtggcggt
361 cagatcgttg gtggagttta cttgttgccg cgcaggggcc ctagattggg tgtgcgcgcg
421 acgaggaaga cttccgagcg gtcgcaacct cgaggtagac gtcagcctat ccccaaggca
481 cgtcggcccg agggcaggac ctgggctcag cccgggtacc cttggcccct ctatggcaat
541 gagggttgcg ggtgggcggg atggctcctg tctccccgtg gctctcggcc tagctggggc
601 cccacagacc cccggcgtag gtcgcgcaat ttgggtaagg tcatcgatac ccttacgtgc
661 ggcttcgccg acctcatggg gtacataccg ctcgtcggcg cccctcttgg aggcgctgcc
721 agggccctgg cgcatggcgt ccgggttctg gaagacggcg tgaactatgc aacagggaac
781 cttcctggtt gctctttctc tatcttcctt ctggccctgc tctcttgcct gactgtgccc
841 gcttcagcct accaagtgcg caattcctcg gggctttacc atgtcaccaa tgattgccct
901 aactcgagta ttgtgtacga ggcggccgat gccatcctgc acactccggg gtgtgtccct
961 tgcgttcgcg agggtaacgc ctcgaggtgt tgggtggcgg tgacccccac ggtggccacc
1021 agggacggca aactccccac aacgcagctt cgacgtcata tcgatctgct tgtcgggagc
1081 gccaccctct gctcggccct ctacgtgggg gacctgtgcg ggtctgtctt tcttgttggt
1141 caactgttta ccttctctcc caggcgccac tggacgacgc aagactgcaa ttgttctatc
1201 tatcccggcc atataacggg tcatcgcatg gcatgggata tgatgatgaa ctggtcccct
1261 acggcagcgt tggtggtagc tcagctgctc cggatcccac aagccatcat ggacatgatc
1321 gctggtgctc actggggagt cctggcgggc atagcgtatt tctccatggt ggggaactgg
1381 gcgaaggtcc tggtagtgct gctgctattt gccggcgtcg acgcggaaac ccacgtcacc
1441 gggggaagtg ccggccgcac cacggctggg cttgttggtc tccttacacc aggcgccaag
1501 cagaacatcc aactgatcaa caccaacggc agttggcaca tcaatagcac ggccttgaac
1561 tgcaatgaaa gccttaacac cggctggtta gcagggctct tctatcacca caaattcaac
1621 tcttcaggct gtcctgagag gttggccagc tgccgacgcc ttaccgattt tgcccagggc
1681 tggggtccta tcagttatgc caacggaagc ggcctcgacg aacgccccta ctgctggcac
1741 taccctccaa gaccttgtgg cattgtgccc gcaaagagcg tgtgtggccc ggtatattgc
1801 ttcactccca gccccgtggt ggtgggaacg accgacaggt cgggcgcgcc tacctacagc
1861 tggggtgcaa atgatacgga tgtcttcgtc cttaacaaca ccaggccacc gctgggcaat
1921 tggttcggtt gtacctggat gaactcaact ggattcacca aagtgtgcgg agcgccccct
1981 tgtgtcatcg gaggggtggg caacaacacc ttgctctgcc ccactgattg cttccgcaag
2041 catccggaag ccacatactc tcggtgcggc tccggtccct ggattacacc caggtgcatg
2101 gtcgactacc cgtataggct ttggcactat ccttgtacca tcaattacac catattcaaa
2161 gtcaggatgt acgtgggagg ggtcgagcac aggctggaag cggcctgcaa ctggacgcgg
2221 ggcgaacgct gtgatctgga agacagggac aggtccgagc tcagcccatt gctgctgtcc
2281 accacacagt ggcaggtcct tccgtgttct ttcacgaccc tgccagcctt gtccaccggc
2341 ctcatccacc tccaccagaa cattgtggac gtgcagtact tgtacggggt agggtcaagc
2401 atcgcgtcct gggccattaa gtgggagtac gtcgttctcc tgttccttct gcttgcagac
2461 gcgcgcgtct gctcctgctt gtggatgatg ttactcatat cccaagcgga ggcggctttg
2521 gagaacctcg taatactcaa tgcagcatcc ctggccggga cgcacggtct tgtgtccttc
2581 ctcgtgttct tctgctttgc gtggtatctg
//GenBank-Updates@genbank.bio.net (04/03/91)
LOCUS HPCST90 2610 bp ss-RNA VRL 03-APR-1991
DEFINITION Hepatitis C virus structural gene, 5' end.
ACCESSION M62382
KEYWORDS structural gene.
SOURCE Hepatitis C virus (human patient 'H') 1990 isolate, viral RNA.
ORGANISM Hepatitis C virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Togaviridae incertae sedis.
REFERENCE 1 (bases 1 to 2610)
AUTHORS Ogata,N., Alter,H.J., Miller,R.H. and Purcell,R.H.
TITLE Nucleotide sequence and mutation rate of the H strain of Hepatitis
C virus
JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1991) In press
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS 1816..>2610
/codon_start=1816
BASE COUNT 490 a 784 c 759 g 577 t
ORIGIN
1 acgcagaaag cgtctagcca tggcgttagt atgagtgtcg tacagcctcc aggacccccc
61 ctcccgggag agccatagtg gtctgcggaa ccggtgagta caccggaatt gccaggacga
121 ccgggtcctt tcttggataa acccgctcaa tgcctggaga tttgggcgtg cccccgcaag
181 actgctagcc gagtagtgtt gggtcgcgaa aggccttgtg gtactgcctg atagggtgct
241 tgcgagtgcc ccgggaggtc tcgtagaccg tgcatcatga gcacgaatcc taaacctcaa
301 agaaaaacca aacgtaacac caaccgtcgc ccacaggacg tcaagtttcc gggtggcggt
361 cagatcgttg gtggagttta cttgttgccg cgcaggggcc ctagattggg tgtgcgcgcg
421 acgaggaaga cttccgagcg gtcgcagcct cgaggtagac gtcagcctat ccccaaggca
481 cgtcggcccg agggcaggac ctgggctcag cccgggtacc cttggcccct ctatggcaat
541 gagggttgcg ggtggatggg atggctcctg tctccccgtg gctctcggcc tagttggggc
601 cccacagacc cccggcgtag gtcgcgcaat ttgggtaagg tcatcgatac ctttacgtgc
661 ggcttcgccg acctcatggg gtacataccg ctcgtcggcg cccctcttgg aggcgctgcc
721 agggccctgg cgcacggcgt ccgggttctg gaagacggcg tgaactatgc aacagggaac
781 cttcctggtt gctctttctc tatcttcctt ctggccctgc tctcttgcct gactgtgccc
841 gcttcagcct accaagtgcg caattcctcg gggctttacc atgtcactaa cgattgccct
901 aactcgagta ttgtgtacga ggcggccgat gccatcctgc acactccggg gtgtgtccct
961 tgcgttcgcg agagtaacac ctcgaggtgt tgggtggcgg tgacccctac agtggccact
1021 agggacggca aactccccac aacgcagcta cgacgtcaca tcgatctgct tgtcgggagc
1081 gctaccctct gctcggccct ctacgtgggg gacctgtgcg ggtctgtctt tcttgttggt
1141 caactgttca ccttctctcc caggcgccac tggacgacgc aagactgcaa ctgtactatc
1201 tatcccggcc atataacggg tcaccgcatg gcatgggata tgatgatgaa ctggtcccct
1261 acggcggcgt tggtggtagc tcagctgctc cggatcccac aagccatcat ggatatgatc
1321 gctggtgctc actggggagt cctggcgggc atagcgtatt tctccatggt agggaactgg
1381 gcgaaggtcc tagtagtgct gctgctattt gccggcgtcg acgcggaaac ccacgtcacc
1441 gggggaagtg ccggccgctc cgtgcttggg attgctagtt tccttacacg aggccccaag
1501 cagaacatcc agctgatcaa aaccaacggc agttggcaca tcaatagcac ggccctgaac
1561 tgcaatgaca gccttaacgc cggctggata gcggggctct tctatcacca tggattcaac
1621 tcttcaggct gtcctgagag gttggccagc tgccgacgcc ttaccgattt tgaccagggc
1681 tggggcccta tcagttatgc caacggaagc ggccccgacg aacgtcccta ctgctggcac
1741 taccccccaa gaccttgtgg cattgtgccc gcaaagagcg tgtgtggccc ggtatactgc
1801 ttcactccca gccccgtggt ggtgggaacg accgacaggt cgggcgcgcc tacctacaac
1861 tggggtgaaa atgatacgga tgtcctcatc cttaacaaca ccaggccgcc gctgggcaat
1921 tggttcggtt gtacctggat gaactcaact ggattcacca aagtgtgcgg agcgccccct
1981 tgtgtcatcg gaggggtggg caacaacacc ttgcgctgcc ccactgattg tttccgcaag
2041 catccggaag ccacatactc tcggtgcggc tccggtccct ggatcacacc caggtgcatg
2101 gtccactacc cgtataggct ttggcactat ccttgtacca tcaattacac tatatttaaa
2161 gtcaggatgt acgtgggagg gatcgagcac aggctggaag cggcctgcaa ctggacgcgg
2221 ggcgaacgtt gcgatctgga agacagggac aggtccgagc tcagcccatt gctgctgtcc
2281 actacgcagt ggcaggtcct tccgtgttct ttcacgaccc tgccagcctt gtccaccggc
2341 ctcatccacc tccaccagaa cattgtggac gtgcagtact tgtacggggt agggtcaagc
2401 atcgcgtcct ggaccatcaa gtgggagtac gtcgttctcc tgttcctcct gcttgcagac
2461 gcgcgcgtct gctcctgctt gtggatgatg ttactcatat cccaagcgga ggcggctttg
2521 gagaacctcg taatactcaa tgcagcatcc ctggccgggg cacacggtct cgtgtccttc
2581 ctcgtgttct tctgcttcgc ttggtatctg
//