GenBank-Updates@genbank.bio.net (04/04/91)
LOCUS MUSCOL2A1B 1013 bp ds-DNA ROD 04-APR-1991
DEFINITION Mouse alpha-1 type II collagen gene, exons 42 (3' end), through 46.
ACCESSION M63709
KEYWORDS alpha-1 type II collagen.
SOURCE Mouse DNA.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (sites)
AUTHORS Cheah,K.S.E., Au,P.K.C.., Lau,E.T., Little,P.F.R.. and Stubbs,L.
TITLE The mouse Col2a-1 gene is highly conserved and is linked to Int-1
on chromosome 15
JOURNAL Mammal. Genome (1991) In press
STANDARD full staff_review
REFERENCE 2 (bases 1 to 1013)
AUTHORS Cheah,K.S.E.., Au,P.K.C.., Lau,E.T., Little,P.F.R.. and Stubbs,L.
TITLE The mouse Col2a-1 gene is highly conserved and is linked to Int-1
on Chromosome 15.
JOURNAL Mammalian Genome (1991) In press
STANDARD full staff_review
FEATURES Location/Qualifiers
exon <1..23
/number=exon 42
/standard_name="alpha 1 type II collagen"
/product="type II collagen"
/gene="Col2a-1"
/evidence=EXPERIMENTAL
/citation=Mammalian Genome 1, ??-?? (1991)
CDS join(<1..23,241..294,729..782,428..535,895..1003)
/standard_name="alpha-1 type II collagen"
/product="type II collagen"
/gene="Col2a-1"
/codon_start=1
/partial
misc_feature 1..1003
/function="exons encoding part of triple-helix
aa#962-1078"
/standard_name="Col2a-1"
/product="alpha 1 type II collagen gene"
/evidence=EXPERIMENTAL
/citation=Mammalian Genome 1, ??-?? (1991)
exon 241..294
/number=exon 43
/standard_name="alpha 1 type II collagen"
/product="type II collagen"
/gene="Col2a-1"
/evidence=EXPERIMENTAL
/citation=Mammalian Genome 1, ??-?? (1991)
exon 428..535
/number=exon 44
/standard_name="alpha 1 type II collagen gene"
/product="type II collagen"
/gene="Col2a-1"
exon 729..782
/number=exon 45
/standard_name="alpha 1 type II collagen"
/product="type II collagen"
/gene="Col2a-1"
/evidence=EXPERIMENTAL
/citation=Mammalian Genome 1, ??-?? (1991)
exon 895..1003
/number=exon 46
/standard_name="alpha 1 type II collagen gene"
/product="type II collagen"
/gene="Col2a-1"
/evidence=EXPERIMENTAL
/citation=Mammalian Genome 1, ??-?? (1991)
BASE COUNT 221 a 235 c 331 g 226 t
ORIGIN
1 ctgcaggtga acctggacga gaggtgagcc ctagggcttg gtgtggcagg atgatcttga
61 gggaaggaca cccagagaga ccagggctgg gtgtacaaag aggagggtgg gtggaagctt
121 ggtggacgtg ttagccccga agtctcagtt gggcagaagt gcacaggtca atgcttcaga
181 ccagagtggg agagtaaaca gagagtggct ctaagtgaat cctcatgtcc ccttgtccag
241 ggcagccctg gtgctgatgg accccctgga agagatggtg cagctggagt caaggtaagt
301 gactggcgtc tgtctgggat gggggttccg ggactgtgct ggcctaatga gccactctag
361 aaacaaagta tctctgcctg cctcttctga aacattcttt gctgaatctg acactttgct
421 cctacaggga gatcgtggtg agactggagc actgggtgcc cctggagctc ctgggccccc
481 aggctctcct ggtcctgctg gcccaactgg caaacaagga gacagaggag aggctgtgag
541 tatcctgagt ttaggagtga agagggtgac caagtggtag agagtgttcc gtgtttgctt
601 ttcctgtttt gagtatccag aggtagcccc tgggtctggg gcctcctggg cctgaggcag
661 atgtagacga ggggtttcat gtcctgacac ttcattccct gacgcttttc tcgatctccc
721 cttaacaggg tgcacaaggt cctatgggtc cctcaggacc tgctggagcc cgtgggattg
781 cagtaagtat tggaaaatcc tgtgtggagt cctccttgga aaagagacac caggtctcaa
841 atgagacaca tagtggacca gacttgacca aatctgtgac tttctcattc atagggccct
901 caaggccccc gaggtgacaa aggagaatct ggagagcagg gcgagagggg actgaaggga
961 caccgaggtt tcactggact gcaggggtct gcctggccct ccggtgggtg tca
//