GenBank-Updates@genbank.bio.net (03/16/91)
LOCUS PSEALGDA 1144 bp ds-DNA BCT 16-MAR-1991
DEFINITION Pseudomonas aeruginosa algD gene FUS promoter region.
ACCESSION M63283 M37205
KEYWORDS FUS promoter; mannose dehydrogenase.
SOURCE P.aeruginosa (strain PAOM3) DNA.
ORGANISM Pseudomonas aeruginosa
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Pseudomonadaceae.
REFERENCE 1 (bases 1 to 1144)
AUTHORS Mohr,C.D., Martin,D.W., Konyecsni,W.M., Govan,J.R., Lory,S. and
Deretic,V.
TITLE Role of the far-upstream sites of the algD promoter and the algR
and rpoN genes in environmental modulation of mucoidy in
Pseudomonas aeruginosa
JOURNAL J. Bacteriol. 172, 6576-6580 (1990)
STANDARD full staff_entry
FEATURES Location/Qualifiers
promoter 713..813
/note="FUS sites"
/gene="algD"
mRNA 1144..>1144
/product="GDP mannose dehydrogenase"
/gene="algD"
BASE COUNT 240 a 372 c 304 g 228 t
ORIGIN 34 min on map.
1 cggcctgaat gccgctcgct acgccagttg gcatccggag ttcaccccgg agaacgccaa
61 gcaggcgttg ctcgccttca agggcgatgt ctacaccggc ctcaacgcgg aagacttcgg
121 cgaggacgat ttcgccttcg cccaggatca cctgcgcatg ctctccggtc tctacggcgt
181 gctgcgcccg ctcgacctca tgcagcccta tcgactggaa atgggcaccc gctggccaac
241 gcccgtggca aggatctcta cgccttctgg ggcgagcgta tcagccagtg gctgaacgaa
301 gcgctggccg cccagggcga cgacgtgctg ctcaacctgg cctccaacga gtacttcggc
361 gcggtgaagc gcaaggcgct gcaagggcgg tcatcgacac cgagttcaag gacctgaaga
421 acggccagta caagatcatc agcttctacg ccaagaaggc tcgcggcatg atggctcgct
481 acgtgatccg cgagcgcctc gcggacccgg ccgggctgaa ggacttcaat gcccacggct
541 attacttcag cgccgagcaa tccggcccgg atcagctggt attcctcagg gacgccccgc
601 aagactgatc tccccggccc gccgtcctgg cgggccgctc ctctttcggc acgccgacgc
661 ctcctggcgc taccgttcgt ccctccgaca cccctgctgc gtcgcctttt tccccggaaa
721 agcccttgtg gcgaataggc ctactcaacc gttcgtctgc aagtcattcg gaactgcatc
781 acattttttc acgcccagcc cacagacttt tccccaattc aaggcggaaa tgccatctcc
841 ggcgtaatcc attggccatt accagcctcc cgccattaca tgcaaattac gattgcaaag
901 tgcatgggtc gaagattaag gaatccttaa ggtttgctta aggcggtaaa agcggcttct
961 gtttcattcc ggtgaacgcg gaactttcag ccgccatgca ttctgcaact agtggccatt
1021 ggcaggcatt taacggaaag gccatcaagt tggtatcaag tgatatcaaa cggatatttc
1081 caaatatttc gcgagcggga caaacggccg gaacttccct cgcagagaaa acatcctatc
1141 accg
//GenBank-Updates@genbank.bio.net (04/06/91)
LOCUS PSEALGDA 1144 bp ds-DNA BCT 06-APR-1991
DEFINITION Pseudomonas aeruginosa algD gene FUS promoter region.
ACCESSION M63283 M37205
KEYWORDS FUS promoter; mannose dehydrogenase.
SOURCE P.aeruginosa (strain PAOM3) DNA.
ORGANISM Pseudomonas aeruginosa
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Pseudomonadaceae.
REFERENCE 1 (bases 1 to 1144)
AUTHORS Mohr,C.D., Martin,D.W., Konyecsni,W.M., Govan,J.R.W., Lory,S. and
Deretic,V.
TITLE Role of the far-upstream sites of the algD promoter and the algR
and rpoN genes in environmental modulation of mucoidy in
Pseudomonas aeruginosa
JOURNAL J. Bacteriol. 172, 6576-6580 (1990)
STANDARD full staff_entry
REFERENCE 2 (sites)
AUTHORS Mohr,C.D., Hibler,N.S. and Deretic,V.
TITLE AlgR, a response-regulator controlling mucoidy in Pseudomonas
aeruginosa, binds to the FUS sites of the algD promoter located
unusually far upstream from the mRNA start site
JOURNAL Unpublished (1991)
STANDARD full staff_review
FEATURES Location/Qualifiers
protein_bind 665..684
/bound_moiety="AlgR"
/note="RB1 FUS binding site"
protein_bind complement(666..687)
/bound_moiety="AlgR"
/note="RB1 FUS binding site"
protein_bind 672..681
/bound_moiety="AlgR"
/note="core 1"
/citation=J. Bacteriol. ??, ??-?? (1991)
promoter 713..813
/note="FUS sites"
/gene="algD"
protein_bind 744..762
/bound_moiety="AlgR"
/note="RB2 FUS binding site"
protein_bind 748..757
/bound_moiety="AlgR"
/note="core 2"
/citation=J. Bacteriol. ??, ??-?? (1991)
protein_bind complement(749..764)
/bound_moiety="AlgR"
/note="RB2 FUS binding site"
mRNA 1144..>1144
/product="GDP mannose dehydrogenase"
/gene="algD"
BASE COUNT 240 a 372 c 304 g 228 t
ORIGIN 34 min on map.
1 cggcctgaat gccgctcgct acgccagttg gcatccggag ttcaccccgg agaacgccaa
61 gcaggcgttg ctcgccttca agggcgatgt ctacaccggc ctcaacgcgg aagacttcgg
121 cgaggacgat ttcgccttcg cccaggatca cctgcgcatg ctctccggtc tctacggcgt
181 gctgcgcccg ctcgacctca tgcagcccta tcgactggaa atgggcaccc gctggccaac
241 gcccgtggca aggatctcta cgccttctgg ggcgagcgta tcagccagtg gctgaacgaa
301 gcgctggccg cccagggcga cgacgtgctg ctcaacctgg cctccaacga gtacttcggc
361 gcggtgaagc gcaaggcgct gcaagggcgg tcatcgacac cgagttcaag gacctgaaga
421 acggccagta caagatcatc agcttctacg ccaagaaggc tcgcggcatg atggctcgct
481 acgtgatccg cgagcgcctc gcggacccgg ccgggctgaa ggacttcaat gcccacggct
541 attacttcag cgccgagcaa tccggcccgg atcagctggt attcctcagg gacgccccgc
601 aagactgatc tccccggccc gccgtcctgg cgggccgctc ctctttcggc acgccgacgc
661 ctcctggcgc taccgttcgt ccctccgaca cccctgctgc gtcgcctttt tccccggaaa
721 agcccttgtg gcgaataggc ctactcaacc gttcgtctgc aagtcattcg gaactgcatc
781 acattttttc acgcccagcc cacagacttt tccccaattc aaggcggaaa tgccatctcc
841 ggcgtaatcc attggccatt accagcctcc cgccattaca tgcaaattac gattgcaaag
901 tgcatgggtc gaagattaag gaatccttaa ggtttgctta aggcggtaaa agcggcttct
961 gtttcattcc ggtgaacgcg gaactttcag ccgccatgca ttctgcaact agtggccatt
1021 ggcaggcatt taacggaaag gccatcaagt tggtatcaag tgatatcaaa cggatatttc
1081 caaatatttc gcgagcggga caaacggccg gaacttccct cgcagagaaa acatcctatc
1141 accg
//