GenBank-Updates@genbank.bio.net (04/04/91)
LOCUS RATTCBC3 2841 bp ds-DNA ROD 04-APR-1991
DEFINITION Rat T-cell receptor beta-chain complex, TCBC2B.
ACCESSION M63795
KEYWORDS T-cell receptor beta-chain.
SEGMENT 3 of 3
SOURCE R.norvegicus DNA.
ORGANISM Rattus norvegicus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 2841)
AUTHORS Gutman,G.A., Levinson,G., Byrd,K., Blankenhorn,E.P. and
Williams,C.B.
TITLE Organization and nucleotide sequence of the rat T-cell receptor
beta-chain complex
JOURNAL J. Immunol. (1991) In press
STANDARD full staff_review
COMMENT Genomic sequence of the rat T-cell receptor beta chain constant
region complex, including the four exons of C-beta-2 and a portion
of the 3'UTR. An Alu type 2 repeat and a cryptic rearrangement
signal, both described in reference [1], are noted. This sequence
is approximately 500bp 3' of RATTCBC2A (containing the D and
J-segments of C-beta-2).
FEATURES Location/Qualifiers
misc_feature 765..975
/product="Alu Type 2 repeat (w/ 16bp direct repeats)"
/citation=J. Immunol. ??, ??-?? (1991)
misc_signal 1008..1035
/function="cryptic rearrangement signal #12"
/citation=J. Immunol. ??, ??-?? (1991)
exon 1294..1671
/product="C beta-2 exon 1"
/citation=J. Immunol. ??, ??-?? (1991)
exon 2162..2179
/product="C beta-2 exon 2"
/citation=J. Immunol. ??, ??-?? (1991)
exon 2323..2429
/product="C beta-2 exon 3"
/citation=J. Immunol. ??, ??-?? (1991)
exon 2714..2734
/product="C beta-2 exon 4"
/citation=J. Immunol. ??, ??-?? (1991)
3'UTR (2735.2841)..>2735
/citation=J. Immunol. ??, ??-?? (1991)
BASE COUNT 859 a 619 c 626 g 734 t 3 others
ORIGIN
1 gacggcagag taagacaacc cctccttcca aataaaagaa agaaaagaaa aatgtagaca
61 actcctacta aaaagaaaca gatttccaga gcgattgctg cagagcttgg agcactaagc
121 ctgtgacctt gggtaagaat tgtgcaggat ggataccttt gtttggagcc ctggaataag
181 ataatatcca cagaattatg agaaagggtt aaaataaagt ttccgcatta tcaagaaggt
241 cttgggttgc tagcacaaat atatctatct cttcattttc agcaaatcac ttggaagcaa
301 aggacagaca gaaaagtgca aataactggg gatagttaga ggcagagaag ttgatgagat
361 tactctgcaa aattgagtaa accttatata ttgtgaatac atggtagacc gggatgtcta
421 cacaggcatg ggtgaaaata aaccatctat tgaagtctga ggaaagcttt ctcatgccaa
481 atgtttatct gaacttgaat taccctttaa tcctggtccc ttagctatga cacagataac
541 ttagctgtgg caggatggtc caaatcctta tgtctcttct tcaagtcagt gttgcacatt
601 tcgctttgca agcagaaaag aaattggtac agaagcatta aagaggctct cccatggtca
661 cacaggcatg gaaggtgatt gctcagactc gggccctgta tgtcttattt ctgtggccaa
721 ctccaactaa agacgtgcta aatataataa gaaataaact tctcgggctg gaaagatggt
781 tcagaggtta agagcactac ctgctgttcc agaggtcctg agtgcaattc ccagcaaccc
841 gatggtggct cacaaccatc catgctgaga tccgatgccc tcttctgacc tgcaggccta
901 catgtaggca gaaagctgta tgatgtatac ataataaata aatattcaaa aaggagaaaa
961 tttaaaaaga aagaaaagaa ataaacttct cttgagaaag gaggattaaa actgtgtcaa
1021 tacagagcca ttgtgcagaa cattgggcca gacatttaca gtatgtgttt atgaaaatgg
1081 aaggatagga aaggttgatg tctactggat gaaataaatg accaacaagg taaaagatta
1141 atgccaaaga gaaaaggaat agtggttcca aagccaacag gactggcttt tcagaaactc
1201 tcttagccct tagcctttcc agatacaaac aatttctacc tgatccaggt agtcatcagc
1261 aaaatgctaa tttcacccct ctttactttc cagaggatct gaaaacggtg actccaccca
1321 aggtctcctt gtttgagcca tcagaagcag agatcacaga caaacaaaag gctacccttg
1381 tgtgcttggc caggggcttc ttccctgacc atgtggagct gagctggtgg gtgaatggga
1441 aggagatccg caatggggtc agcacagacc ctcaggccta caaggaaagc aacaacatca
1501 cctactgcct gagcagccgc ctgagggttt ctgctccctt ctggcacaat cctcgcaacc
1561 acttccgctg ccaagtgcag ttctatgggc ttacagagga agacaactgg tcagaggact
1621 cacccaaacc tgtcacacag aacatcagtg cggaggcctg gggccgagca ggtaaatggc
1681 acctggagag ctgacaagaa aactaaacac gactagtact tcaaaaatat gaaatgatct
1741 atgtagaagc aaagaataga cccaggaaaa agcccaaatg gtgggacaga taatcaagga
1801 catggtgtca gaaaaccata gcatatgctt tcttccaagg aatacttaaa ctcaaggggc
1861 agttcaggcc aattggcttc ccagttcttt agtttctctg agctgtgttt atgagttcct
1921 cacagaccct catagcctag tatttnnnag tccatcctga tgtagatttt aaggtctcgg
1981 tgacattgcc tggcaccatc agaagacagt gtgaggagta tcagcggaga gtgcttatgc
2041 catctgacgt gcatctgtct gtggccttaa cattcacctt taaattttgt tgttgggtgt
2101 agaacatccc caagaagtgc cattctttca cccatttttt cctccctctc ttttctttca
2161 gactgtggaa tcacctcagg tgagtaaatc tctcaacttt ctctaagtct tctgtggtct
2221 tggctttgaa aacaggacac aaaattctac aaacatggag tttggggctg cccaaaggaa
2281 cctgtttata agcacctact cactctcctt tcctattaac agcatcctat catcaagggg
2341 ttctgtctgc caccatcctc tatgagatcc tactggggaa ggccacgttg tatgctgtgc
2401 tagtcagtgc cctggtgctg atggccatgg taagaatggt aggatgggac aaacggttgg
2461 aggtatagac tgcagtgtat ggaatgtatg gtgatcttag aggaggaccc aaccctgata
2521 tccagtcatg tcaaaaatac cataaggaac acagtacaaa gtaaaactgg aggaatgctt
2581 atgtttgtac tcctggagga tgaggagaac caaggagctc tcttcaagat catacttgag
2641 aatctatttc ctgtataacc cctccctctg ctccatggat tctggaggtt taacaatgtc
2701 ttttctttct caggtcaaga aaaaaaattc ctgagacaaa ctttatgcat cctgagctgt
2761 tctttaccct ggccatggat tttcccgcac cttctccaat ccctgttcct aaggacttgt
2821 ctcctctccc tccatggaaa t
//GenBank-Updates@genbank.bio.net (04/09/91)
LOCUS RATTCBC3 2841 bp ds-DNA ROD 09-APR-1991
DEFINITION Rat T-cell receptor beta-chain complex, TCBC2B.
ACCESSION M63795
KEYWORDS T-cell receptor beta-chain.
SEGMENT 3 of 3
SOURCE R.norvegicus DNA.
ORGANISM Rattus norvegicus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (sites)
AUTHORS Gutman,G.A., Levinson,G., Byrd,K., Blankenhorn,E.P. and
Williams,C.B.
TITLE Organization and nucleotide sequence of the rat T-cell receptor
beta-chain complex
JOURNAL J. Immunol. (1991) In press
STANDARD full staff_review
COMMENT Genomic sequence of the rat T-cell receptor beta chain constant
region complex, including the four exons of C-beta-2 and a portion
of the 3'UTR. An Alu type 2 repeat and a cryptic rearrangement
signal, both described in reference [1], are noted. This sequence
is approximately 500bp 3' of RATTCBC2A (containing the D and
J-segments of C-beta-2).
FEATURES Location/Qualifiers
misc_feature 765..975
/product="Alu Type 2 repeat (w/ 16bp direct repeats)"
/citation=J. Immunol. ??, ??-?? (1991)
misc_signal 1008..1035
/function="cryptic rearrangement signal #12"
/citation=J. Immunol. ??, ??-?? (1991)
exon 1294..1671
/product="C beta-2 exon 1"
/citation=J. Immunol. ??, ??-?? (1991)
exon 2162..2179
/product="C beta-2 exon 2"
/citation=J. Immunol. ??, ??-?? (1991)
exon 2323..2429
/product="C beta-2 exon 3"
/citation=J. Immunol. ??, ??-?? (1991)
exon 2714..2734
/product="C beta-2 exon 4"
/citation=J. Immunol. ??, ??-?? (1991)
3'UTR (2735.2841)..>2735
/citation=J. Immunol. ??, ??-?? (1991)
BASE COUNT 859 a 619 c 626 g 734 t 3 others
ORIGIN
1 gacggcagag taagacaacc cctccttcca aataaaagaa agaaaagaaa aatgtagaca
61 actcctacta aaaagaaaca gatttccaga gcgattgctg cagagcttgg agcactaagc
121 ctgtgacctt gggtaagaat tgtgcaggat ggataccttt gtttggagcc ctggaataag
181 ataatatcca cagaattatg agaaagggtt aaaataaagt ttccgcatta tcaagaaggt
241 cttgggttgc tagcacaaat atatctatct cttcattttc agcaaatcac ttggaagcaa
301 aggacagaca gaaaagtgca aataactggg gatagttaga ggcagagaag ttgatgagat
361 tactctgcaa aattgagtaa accttatata ttgtgaatac atggtagacc gggatgtcta
421 cacaggcatg ggtgaaaata aaccatctat tgaagtctga ggaaagcttt ctcatgccaa
481 atgtttatct gaacttgaat taccctttaa tcctggtccc ttagctatga cacagataac
541 ttagctgtgg caggatggtc caaatcctta tgtctcttct tcaagtcagt gttgcacatt
601 tcgctttgca agcagaaaag aaattggtac agaagcatta aagaggctct cccatggtca
661 cacaggcatg gaaggtgatt gctcagactc gggccctgta tgtcttattt ctgtggccaa
721 ctccaactaa agacgtgcta aatataataa gaaataaact tctcgggctg gaaagatggt
781 tcagaggtta agagcactac ctgctgttcc agaggtcctg agtgcaattc ccagcaaccc
841 gatggtggct cacaaccatc catgctgaga tccgatgccc tcttctgacc tgcaggccta
901 catgtaggca gaaagctgta tgatgtatac ataataaata aatattcaaa aaggagaaaa
961 tttaaaaaga aagaaaagaa ataaacttct cttgagaaag gaggattaaa actgtgtcaa
1021 tacagagcca ttgtgcagaa cattgggcca gacatttaca gtatgtgttt atgaaaatgg
1081 aaggatagga aaggttgatg tctactggat gaaataaatg accaacaagg taaaagatta
1141 atgccaaaga gaaaaggaat agtggttcca aagccaacag gactggcttt tcagaaactc
1201 tcttagccct tagcctttcc agatacaaac aatttctacc tgatccaggt agtcatcagc
1261 aaaatgctaa tttcacccct ctttactttc cagaggatct gaaaacggtg actccaccca
1321 aggtctcctt gtttgagcca tcagaagcag agatcacaga caaacaaaag gctacccttg
1381 tgtgcttggc caggggcttc ttccctgacc atgtggagct gagctggtgg gtgaatggga
1441 aggagatccg caatggggtc agcacagacc ctcaggccta caaggaaagc aacaacatca
1501 cctactgcct gagcagccgc ctgagggttt ctgctccctt ctggcacaat cctcgcaacc
1561 acttccgctg ccaagtgcag ttctatgggc ttacagagga agacaactgg tcagaggact
1621 cacccaaacc tgtcacacag aacatcagtg cggaggcctg gggccgagca ggtaaatggc
1681 acctggagag ctgacaagaa aactaaacac gactagtact tcaaaaatat gaaatgatct
1741 atgtagaagc aaagaataga cccaggaaaa agcccaaatg gtgggacaga taatcaagga
1801 catggtgtca gaaaaccata gcatatgctt tcttccaagg aatacttaaa ctcaaggggc
1861 agttcaggcc aattggcttc ccagttcttt agtttctctg agctgtgttt atgagttcct
1921 cacagaccct catagcctag tatttnnnag tccatcctga tgtagatttt aaggtctcgg
1981 tgacattgcc tggcaccatc agaagacagt gtgaggagta tcagcggaga gtgcttatgc
2041 catctgacgt gcatctgtct gtggccttaa cattcacctt taaattttgt tgttgggtgt
2101 agaacatccc caagaagtgc cattctttca cccatttttt cctccctctc ttttctttca
2161 gactgtggaa tcacctcagg tgagtaaatc tctcaacttt ctctaagtct tctgtggtct
2221 tggctttgaa aacaggacac aaaattctac aaacatggag tttggggctg cccaaaggaa
2281 cctgtttata agcacctact cactctcctt tcctattaac agcatcctat catcaagggg
2341 ttctgtctgc caccatcctc tatgagatcc tactggggaa ggccacgttg tatgctgtgc
2401 tagtcagtgc cctggtgctg atggccatgg taagaatggt aggatgggac aaacggttgg
2461 aggtatagac tgcagtgtat ggaatgtatg gtgatcttag aggaggaccc aaccctgata
2521 tccagtcatg tcaaaaatac cataaggaac acagtacaaa gtaaaactgg aggaatgctt
2581 atgtttgtac tcctggagga tgaggagaac caaggagctc tcttcaagat catacttgag
2641 aatctatttc ctgtataacc cctccctctg ctccatggat tctggaggtt taacaatgtc
2701 ttttctttct caggtcaaga aaaaaaattc ctgagacaaa ctttatgcat cctgagctgt
2761 tctttaccct ggccatggat tttcccgcac cttctccaat ccctgttcct aaggacttgt
2821 ctcctctccc tccatggaaa t
//