GenBank-Updates@genbank.bio.net (01/25/91)
LOCUS BRPANTCL 3253 bp ds-DNA INV 25-JAN-1991
DEFINITION Brugia malayi probe pBmCW3.
ACCESSION M38435
KEYWORDS collagen-like antigen.
SOURCE B.malayi DNA.
ORGANISM Brugia malayi
Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria;
Spirurida; Spirurina; Filarioidea; Gnathostomatidae.
REFERENCE 1 (sites)
AUTHORS Werner,C., Higashi,G.I., Yates,J.A. and Rajan,T.V.
TITLE Differential recognition of two cloned Brugia malayi antigens by
antibody class
JOURNAL Mol. Biochem. Parasitol. 35, 209-218 (1989)
STANDARD full staff_review
REFERENCE 2 (bases 1 to 3253)
AUTHORS Caulagi,V.R., Werner,C. and Rajan,T.V.
TITLE Isolation and partial sequence of a collagen gene from the human
filarial parasite, Brugia malayi
JOURNAL Unpublished (1990)
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted
by C.Werner, 12-SEP-1990.
University of Connecticut Health Center
Dept of Pathology
263 Farmington Ave.
Farmington, CT USA 06030
FEATURES Location/Qualifiers
CDS join(791..920,1157..1341,
1630..1819,1962..2097,2162..2298,2559..2884,
3003..3253)
/gene="antigen"
/codon_start=1
/partial
/product="collagen-like antigen"
intron 1..790
/gene="antigen"
/partial
exon 791..920
/gene="antigen"
/codon_start=791
intron 921..1156
/gene="antigen"
exon 1157..1341
/gene="antigen"
/codon_start=1157
intron 1342..1629
/gene="antigen"
exon 1630..1819
/gene="antigen"
/codon_start=1630
intron 1820..1961
/gene="antigen"
exon 1962..2097
/gene="antigen"
/codon_start=1962
intron 2098..2161
/gene="antigen"
exon 2162..2298
/gene="antigen"
/codon_start=2162
intron 2299..2558
/gene="antigen"
exon 2559..2884
/gene="antigen"
/codon_start=2559
misc_feature 2567..2740
/note="product = Probe pBmCW3."
intron 2885..3002
/gene="antigen"
exon 3003..3253
/gene="antigen"
/codon_start=3003
/partial
BASE COUNT 997 a 564 c 687 g 1005 t
ORIGIN
1 gaattccgag atcgattttt tttttttgaa aactaacaat tctaattctt agtgcgcaaa
61 taagcaaaat aggggcgcaa ctatctataa gaaattgcgc aaaattggaa taaacaagca
121 actgatctca tataagtctt atcatctttt gaaaattttt tcacaatttc ttaactaatt
181 ttaaaacttc tttccattgc ttgcttatca gagaatgcaa atttaaattt cattttaaaa
241 gttactatct gcttgtgata acttttgttt tatctgtcag ttaacaatat aagcaagaaa
301 aaaattctaa aaaaaatctc aaattcattt ttgttatact taaaaatgtt aaacatttta
361 atttaattaa aaaaatttgc gcgttatatt attattataa ttcaaaattt aactattaaa
421 aaaatttttc cttcaatgaa ttaatttact ttactttact ttactttatg cttaagcatt
481 tatcatgata atcattctca ttctgaaaat attcaaacat ttaccagtat aaccaataat
541 aaaataaaca ttcagcaaat taataaaggt ttaatttaaa tggcgaaaag gaaggaaaag
601 aaaaaatttt agtaaacatt tgaaatcgtt gcatgtaact ttgttttgat acattcttat
661 ttacttactt actttatgct aatctaacag ctttctttca gaaagaatct ttcaatgaaa
721 gcttaatacc attttaaatg taatagttta tttgttttcg agtaatgcat atttatacat
781 gtatttttag ggtgaacctg gagaacctgg agcacgtgga tatccgggaa atgctggtgc
841 accaggacaa ccgggtttcc ctggaatgaa aggtgaaaaa ggattatctg gaccagctgg
901 accacgagta agtttttata gtaatttata ctcaataaat gattattcaa tatgatcatt
961 aattcattaa aggaaatatg caactgtttt tttaattcag ttttatttct attgcttttt
1021 tttttttgaa tatattttct aaattttcga attttttttt tttgtgaatt ttttttaatg
1081 ataaatggtt aaaattatat ggattttaag ttttgaagtt ttattcaaca ttaagagatt
1141 tgtaaaagtg attcaggcta ttcttgtgtt atttgtaggg taaagaagac gcctggctta
1201 ccaggcccac caggtttcaa gggtgatcga ggcttagatg gtttgccagg tgtgcctggt
1261 ttacctggtc aaaagggtga accaggtttt ccaggtcgag atggatcaaa aggagttcga
1321 ggtccaccag gaccaccagg agtaggtatt taatccttag agtttcagct acctctgtga
1381 tagtttatgc aatattttta aaaaaatgaa atgtgacaaa agcatccgtc gagattaaga
1441 ctgctactat gctccttgta taactgaaaa gttttaaaag gaaatcttac tgacagtact
1501 atgcgatcaa aaagattcca ttgacaattg attaattgtt cttctcataa atttctgatc
1561 taaaaggaag aatatttcat accaatttgt gagacaacac tttattttat tcaattataa
1621 taactatagg gcggtgattt tacggatgga ccgccgggac cacgtggatt accaggtcga
1681 gaagggcaac ctggtccacc gggtgttgac ggttatcctg ggccacctgg accaccaggc
1741 cctcaaggac caccaggtgg ccctggactt ccaggtttgc ctggtttaga aggaataccc
1801 ggaccaaaag gagcaaaagg ttggtaatat tattgcatat tttcctagca tatttcttag
1861 caatacttta tgctgaattt tttaactatg tcactttaca ggtgatgctg gtatcccagg
1921 tgctcctggt gtacctggac caccaggatt gcctgggcca cgaggaccta aaggtgagcc
1981 tgggccacgt ggtattgatg gaaagagtat tcccggtttg ccaggtaaag atggtagacc
2041 tggtttggat ggtttgcccg gaagaaaagg agaaatggga ttaccagggt gttcgaggta
2101 agtcaatttt tttttgacaa ttaaacaaag tgcagcaatt tgattctaaa aaaatccata
2161 gtttaggtcc tcctggtgat tcactgaatg gacttcctgg tccgccaggt tgcgagggac
2221 caccgggacc caaaggttat gacggacgag atggatgctc cggtttgcct ggtttacctg
2281 gacaaaaagg tgaccgtggt ggacgtgttt ggcttgtctt ccggaatgaa aggacaaaaa
2341 ggtaactttt aattgcagaa atcaatgaat cgataagttt ttcctgataa tttttctgaa
2401 attgaacatt tgttggagtg ttctgttcag gaaagttttg caaatgagga agtttatcaa
2461 aagattagag aatgattatt caggtaaacc tgataaaaga ttggctaaaa ggtagctggg
2521 tagaagatgc attacggtta ctattgccac cttttcaggc tctgctggtt atccgggctt
2581 gcctggacca caaggtgaaa ggggattacc aggagtgcca ggtgctcagg gtccccctgg
2641 agatgatgga atgcctggtg cgccaggaag acctggacca ccgggaccac ctggaaaaga
2701 cggcattccc ggtttaccag gacagaaggg tgaaccaaca catatgttgc ttcgaccagg
2761 accaccagga tatcggggtc agaagggtga agctggcttc ccaggcttgc ctggacaagt
2821 tggactacct gggaaatccg gaccacctgg tttgaccgga ttgcccggaa taccaggacc
2881 aaaggtcagc ataatattac aacatttcaa atttgaaaat ccaaaaatta gtactcatca
2941 aactccttaa tttatttttg taaatgaatg tatgataagt taacaacgtt gcattatttc
3001 agggcgaacc gggttttcct gggttgacag gaaaacctgg caaagacgga cttccaggtt
3061 ttcctggatt caaaggagct ccaggttacg gtgctccagg attgccagga cttccgggcc
3121 agaaaggaga agcgggactt cctggtctac caggagctca aggacctgtt ggaccaatgg
3181 gaccacctgt agccgaaagt cagctgaaac caggacctcc aggaaaagac ggattaccag
3241 gattgccggg ccc
//GenBank-Updates@genbank.bio.net (04/10/91)
LOCUS BRPANTCL 3253 bp ds-DNA INV 10-APR-1991
DEFINITION Brugia malayi probe pBmCW3.
ACCESSION M38435
KEYWORDS collagen-like antigen.
SOURCE B.malayi DNA.
ORGANISM Brugia malayi
Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria;
Spirurida; Spirurina; Filarioidea; Gnathostomatidae.
REFERENCE 1 (sites)
AUTHORS Werner,C., Higashi,G.I., Yates,J.A. and Rajan,T.V.
TITLE Differential recognition of two cloned Brugia malayi antigens by
antibody class
JOURNAL Mol. Biochem. Parasitol. 35, 209-218 (1989)
STANDARD full staff_review
REFERENCE 2 (bases 1 to 3253)
AUTHORS Caulagi,V.R., Werner,C. and Rajan,T.V.
TITLE Isolation and partial sequence of a collagen gene from the human
filarial parasite Brugia malayi
JOURNAL Mol. Biochem. Parasitol. 45, 57-64 (1991)
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)]
kindly submitted
by C.Werner, 12-SEP-1990.
University of Connecticut Health Center
Dept of Pathology
263 Farmington Ave.
Farmington, CT USA 06030
FEATURES Location/Qualifiers
CDS join(791..920,1157..1341,1630..1819,1962..2097,2162..2298,
2559..2884,3003..3253)
/product="collagen-like antigen"
/gene="antigen"
/codon_start=791
/partial
intron 1..790
/gene="antigen"
/partial
exon 791..920
/gene="antigen"
intron 921..1156
/gene="antigen"
exon 1157..1341
/gene="antigen"
intron 1342..1629
/gene="antigen"
exon 1630..1819
/gene="antigen"
intron 1820..1961
/gene="antigen"
exon 1962..2097
/gene="antigen"
intron 2098..2161
/gene="antigen"
exon 2162..2298
/gene="antigen"
intron 2299..2558
/gene="antigen"
exon 2559..2884
/gene="antigen"
misc_feature 2567..2740
/note="product = Probe pBmCW3."
intron 2885..3002
/gene="antigen"
exon 3003..3253
/gene="antigen"
/partial
BASE COUNT 997 a 564 c 687 g 1005 t
ORIGIN
1 gaattccgag atcgattttt tttttttgaa aactaacaat tctaattctt agtgcgcaaa
61 taagcaaaat aggggcgcaa ctatctataa gaaattgcgc aaaattggaa taaacaagca
121 actgatctca tataagtctt atcatctttt gaaaattttt tcacaatttc ttaactaatt
181 ttaaaacttc tttccattgc ttgcttatca gagaatgcaa atttaaattt cattttaaaa
241 gttactatct gcttgtgata acttttgttt tatctgtcag ttaacaatat aagcaagaaa
301 aaaattctaa aaaaaatctc aaattcattt ttgttatact taaaaatgtt aaacatttta
361 atttaattaa aaaaatttgc gcgttatatt attattataa ttcaaaattt aactattaaa
421 aaaatttttc cttcaatgaa ttaatttact ttactttact ttactttatg cttaagcatt
481 tatcatgata atcattctca ttctgaaaat attcaaacat ttaccagtat aaccaataat
541 aaaataaaca ttcagcaaat taataaaggt ttaatttaaa tggcgaaaag gaaggaaaag
601 aaaaaatttt agtaaacatt tgaaatcgtt gcatgtaact ttgttttgat acattcttat
661 ttacttactt actttatgct aatctaacag ctttctttca gaaagaatct ttcaatgaaa
721 gcttaatacc attttaaatg taatagttta tttgttttcg agtaatgcat atttatacat
781 gtatttttag ggtgaacctg gagaacctgg agcacgtgga tatccgggaa atgctggtgc
841 accaggacaa ccgggtttcc ctggaatgaa aggtgaaaaa ggattatctg gaccagctgg
901 accacgagta agtttttata gtaatttata ctcaataaat gattattcaa tatgatcatt
961 aattcattaa aggaaatatg caactgtttt tttaattcag ttttatttct attgcttttt
1021 tttttttgaa tatattttct aaattttcga attttttttt tttgtgaatt ttttttaatg
1081 ataaatggtt aaaattatat ggattttaag ttttgaagtt ttattcaaca ttaagagatt
1141 tgtaaaagtg attcaggcta ttcttgtgtt atttgtaggg taaagaagac gcctggctta
1201 ccaggcccac caggtttcaa gggtgatcga ggcttagatg gtttgccagg tgtgcctggt
1261 ttacctggtc aaaagggtga accaggtttt ccaggtcgag atggatcaaa aggagttcga
1321 ggtccaccag gaccaccagg agtaggtatt taatccttag agtttcagct acctctgtga
1381 tagtttatgc aatattttta aaaaaatgaa atgtgacaaa agcatccgtc gagattaaga
1441 ctgctactat gctccttgta taactgaaaa gttttaaaag gaaatcttac tgacagtact
1501 atgcgatcaa aaagattcca ttgacaattg attaattgtt cttctcataa atttctgatc
1561 taaaaggaag aatatttcat accaatttgt gagacaacac tttattttat tcaattataa
1621 taactatagg gcggtgattt tacggatgga ccgccgggac cacgtggatt accaggtcga
1681 gaagggcaac ctggtccacc gggtgttgac ggttatcctg ggccacctgg accaccaggc
1741 cctcaaggac caccaggtgg ccctggactt ccaggtttgc ctggtttaga aggaataccc
1801 ggaccaaaag gagcaaaagg ttggtaatat tattgcatat tttcctagca tatttcttag
1861 caatacttta tgctgaattt tttaactatg tcactttaca ggtgatgctg gtatcccagg
1921 tgctcctggt gtacctggac caccaggatt gcctgggcca cgaggaccta aaggtgagcc
1981 tgggccacgt ggtattgatg gaaagagtat tcccggtttg ccaggtaaag atggtagacc
2041 tggtttggat ggtttgcccg gaagaaaagg agaaatggga ttaccagggt gttcgaggta
2101 agtcaatttt tttttgacaa ttaaacaaag tgcagcaatt tgattctaaa aaaatccata
2161 gtttaggtcc tcctggtgat tcactgaatg gacttcctgg tccgccaggt tgcgagggac
2221 caccgggacc caaaggttat gacggacgag atggatgctc cggtttgcct ggtttacctg
2281 gacaaaaagg tgaccgtggt ggacgtgttt ggcttgtctt ccggaatgaa aggacaaaaa
2341 ggtaactttt aattgcagaa atcaatgaat cgataagttt ttcctgataa tttttctgaa
2401 attgaacatt tgttggagtg ttctgttcag gaaagttttg caaatgagga agtttatcaa
2461 aagattagag aatgattatt caggtaaacc tgataaaaga ttggctaaaa ggtagctggg
2521 tagaagatgc attacggtta ctattgccac cttttcaggc tctgctggtt atccgggctt
2581 gcctggacca caaggtgaaa ggggattacc aggagtgcca ggtgctcagg gtccccctgg
2641 agatgatgga atgcctggtg cgccaggaag acctggacca ccgggaccac ctggaaaaga
2701 cggcattccc ggtttaccag gacagaaggg tgaaccaaca catatgttgc ttcgaccagg
2761 accaccagga tatcggggtc agaagggtga agctggcttc ccaggcttgc ctggacaagt
2821 tggactacct gggaaatccg gaccacctgg tttgaccgga ttgcccggaa taccaggacc
2881 aaaggtcagc ataatattac aacatttcaa atttgaaaat ccaaaaatta gtactcatca
2941 aactccttaa tttatttttg taaatgaatg tatgataagt taacaacgtt gcattatttc
3001 agggcgaacc gggttttcct gggttgacag gaaaacctgg caaagacgga cttccaggtt
3061 ttcctggatt caaaggagct ccaggttacg gtgctccagg attgccagga cttccgggcc
3121 agaaaggaga agcgggactt cctggtctac caggagctca aggacctgtt ggaccaatgg
3181 gaccacctgt agccgaaagt cagctgaaac caggacctcc aggaaaagac ggattaccag
3241 gattgccggg ccc
//