GenBank-Updates@genbank.bio.net (01/25/91)
LOCUS BRPANTCL 3253 bp ds-DNA INV 25-JAN-1991 DEFINITION Brugia malayi probe pBmCW3. ACCESSION M38435 KEYWORDS collagen-like antigen. SOURCE B.malayi DNA. ORGANISM Brugia malayi Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Gnathostomatidae. REFERENCE 1 (sites) AUTHORS Werner,C., Higashi,G.I., Yates,J.A. and Rajan,T.V. TITLE Differential recognition of two cloned Brugia malayi antigens by antibody class JOURNAL Mol. Biochem. Parasitol. 35, 209-218 (1989) STANDARD full staff_review REFERENCE 2 (bases 1 to 3253) AUTHORS Caulagi,V.R., Werner,C. and Rajan,T.V. TITLE Isolation and partial sequence of a collagen gene from the human filarial parasite, Brugia malayi JOURNAL Unpublished (1990) STANDARD simple staff_entry COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)] kindly submitted by C.Werner, 12-SEP-1990. University of Connecticut Health Center Dept of Pathology 263 Farmington Ave. Farmington, CT USA 06030 FEATURES Location/Qualifiers CDS join(791..920,1157..1341, 1630..1819,1962..2097,2162..2298,2559..2884, 3003..3253) /gene="antigen" /codon_start=1 /partial /product="collagen-like antigen" intron 1..790 /gene="antigen" /partial exon 791..920 /gene="antigen" /codon_start=791 intron 921..1156 /gene="antigen" exon 1157..1341 /gene="antigen" /codon_start=1157 intron 1342..1629 /gene="antigen" exon 1630..1819 /gene="antigen" /codon_start=1630 intron 1820..1961 /gene="antigen" exon 1962..2097 /gene="antigen" /codon_start=1962 intron 2098..2161 /gene="antigen" exon 2162..2298 /gene="antigen" /codon_start=2162 intron 2299..2558 /gene="antigen" exon 2559..2884 /gene="antigen" /codon_start=2559 misc_feature 2567..2740 /note="product = Probe pBmCW3." intron 2885..3002 /gene="antigen" exon 3003..3253 /gene="antigen" /codon_start=3003 /partial BASE COUNT 997 a 564 c 687 g 1005 t ORIGIN 1 gaattccgag atcgattttt tttttttgaa aactaacaat tctaattctt agtgcgcaaa 61 taagcaaaat aggggcgcaa ctatctataa gaaattgcgc aaaattggaa taaacaagca 121 actgatctca tataagtctt atcatctttt gaaaattttt tcacaatttc ttaactaatt 181 ttaaaacttc tttccattgc ttgcttatca gagaatgcaa atttaaattt cattttaaaa 241 gttactatct gcttgtgata acttttgttt tatctgtcag ttaacaatat aagcaagaaa 301 aaaattctaa aaaaaatctc aaattcattt ttgttatact taaaaatgtt aaacatttta 361 atttaattaa aaaaatttgc gcgttatatt attattataa ttcaaaattt aactattaaa 421 aaaatttttc cttcaatgaa ttaatttact ttactttact ttactttatg cttaagcatt 481 tatcatgata atcattctca ttctgaaaat attcaaacat ttaccagtat aaccaataat 541 aaaataaaca ttcagcaaat taataaaggt ttaatttaaa tggcgaaaag gaaggaaaag 601 aaaaaatttt agtaaacatt tgaaatcgtt gcatgtaact ttgttttgat acattcttat 661 ttacttactt actttatgct aatctaacag ctttctttca gaaagaatct ttcaatgaaa 721 gcttaatacc attttaaatg taatagttta tttgttttcg agtaatgcat atttatacat 781 gtatttttag ggtgaacctg gagaacctgg agcacgtgga tatccgggaa atgctggtgc 841 accaggacaa ccgggtttcc ctggaatgaa aggtgaaaaa ggattatctg gaccagctgg 901 accacgagta agtttttata gtaatttata ctcaataaat gattattcaa tatgatcatt 961 aattcattaa aggaaatatg caactgtttt tttaattcag ttttatttct attgcttttt 1021 tttttttgaa tatattttct aaattttcga attttttttt tttgtgaatt ttttttaatg 1081 ataaatggtt aaaattatat ggattttaag ttttgaagtt ttattcaaca ttaagagatt 1141 tgtaaaagtg attcaggcta ttcttgtgtt atttgtaggg taaagaagac gcctggctta 1201 ccaggcccac caggtttcaa gggtgatcga ggcttagatg gtttgccagg tgtgcctggt 1261 ttacctggtc aaaagggtga accaggtttt ccaggtcgag atggatcaaa aggagttcga 1321 ggtccaccag gaccaccagg agtaggtatt taatccttag agtttcagct acctctgtga 1381 tagtttatgc aatattttta aaaaaatgaa atgtgacaaa agcatccgtc gagattaaga 1441 ctgctactat gctccttgta taactgaaaa gttttaaaag gaaatcttac tgacagtact 1501 atgcgatcaa aaagattcca ttgacaattg attaattgtt cttctcataa atttctgatc 1561 taaaaggaag aatatttcat accaatttgt gagacaacac tttattttat tcaattataa 1621 taactatagg gcggtgattt tacggatgga ccgccgggac cacgtggatt accaggtcga 1681 gaagggcaac ctggtccacc gggtgttgac ggttatcctg ggccacctgg accaccaggc 1741 cctcaaggac caccaggtgg ccctggactt ccaggtttgc ctggtttaga aggaataccc 1801 ggaccaaaag gagcaaaagg ttggtaatat tattgcatat tttcctagca tatttcttag 1861 caatacttta tgctgaattt tttaactatg tcactttaca ggtgatgctg gtatcccagg 1921 tgctcctggt gtacctggac caccaggatt gcctgggcca cgaggaccta aaggtgagcc 1981 tgggccacgt ggtattgatg gaaagagtat tcccggtttg ccaggtaaag atggtagacc 2041 tggtttggat ggtttgcccg gaagaaaagg agaaatggga ttaccagggt gttcgaggta 2101 agtcaatttt tttttgacaa ttaaacaaag tgcagcaatt tgattctaaa aaaatccata 2161 gtttaggtcc tcctggtgat tcactgaatg gacttcctgg tccgccaggt tgcgagggac 2221 caccgggacc caaaggttat gacggacgag atggatgctc cggtttgcct ggtttacctg 2281 gacaaaaagg tgaccgtggt ggacgtgttt ggcttgtctt ccggaatgaa aggacaaaaa 2341 ggtaactttt aattgcagaa atcaatgaat cgataagttt ttcctgataa tttttctgaa 2401 attgaacatt tgttggagtg ttctgttcag gaaagttttg caaatgagga agtttatcaa 2461 aagattagag aatgattatt caggtaaacc tgataaaaga ttggctaaaa ggtagctggg 2521 tagaagatgc attacggtta ctattgccac cttttcaggc tctgctggtt atccgggctt 2581 gcctggacca caaggtgaaa ggggattacc aggagtgcca ggtgctcagg gtccccctgg 2641 agatgatgga atgcctggtg cgccaggaag acctggacca ccgggaccac ctggaaaaga 2701 cggcattccc ggtttaccag gacagaaggg tgaaccaaca catatgttgc ttcgaccagg 2761 accaccagga tatcggggtc agaagggtga agctggcttc ccaggcttgc ctggacaagt 2821 tggactacct gggaaatccg gaccacctgg tttgaccgga ttgcccggaa taccaggacc 2881 aaaggtcagc ataatattac aacatttcaa atttgaaaat ccaaaaatta gtactcatca 2941 aactccttaa tttatttttg taaatgaatg tatgataagt taacaacgtt gcattatttc 3001 agggcgaacc gggttttcct gggttgacag gaaaacctgg caaagacgga cttccaggtt 3061 ttcctggatt caaaggagct ccaggttacg gtgctccagg attgccagga cttccgggcc 3121 agaaaggaga agcgggactt cctggtctac caggagctca aggacctgtt ggaccaatgg 3181 gaccacctgt agccgaaagt cagctgaaac caggacctcc aggaaaagac ggattaccag 3241 gattgccggg ccc //
GenBank-Updates@genbank.bio.net (04/10/91)
LOCUS BRPANTCL 3253 bp ds-DNA INV 10-APR-1991 DEFINITION Brugia malayi probe pBmCW3. ACCESSION M38435 KEYWORDS collagen-like antigen. SOURCE B.malayi DNA. ORGANISM Brugia malayi Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Gnathostomatidae. REFERENCE 1 (sites) AUTHORS Werner,C., Higashi,G.I., Yates,J.A. and Rajan,T.V. TITLE Differential recognition of two cloned Brugia malayi antigens by antibody class JOURNAL Mol. Biochem. Parasitol. 35, 209-218 (1989) STANDARD full staff_review REFERENCE 2 (bases 1 to 3253) AUTHORS Caulagi,V.R., Werner,C. and Rajan,T.V. TITLE Isolation and partial sequence of a collagen gene from the human filarial parasite Brugia malayi JOURNAL Mol. Biochem. Parasitol. 45, 57-64 (1991) STANDARD simple staff_entry COMMENT Draft entry and computer-readable sequence for [Unpublished (1990)] kindly submitted by C.Werner, 12-SEP-1990. University of Connecticut Health Center Dept of Pathology 263 Farmington Ave. Farmington, CT USA 06030 FEATURES Location/Qualifiers CDS join(791..920,1157..1341,1630..1819,1962..2097,2162..2298, 2559..2884,3003..3253) /product="collagen-like antigen" /gene="antigen" /codon_start=791 /partial intron 1..790 /gene="antigen" /partial exon 791..920 /gene="antigen" intron 921..1156 /gene="antigen" exon 1157..1341 /gene="antigen" intron 1342..1629 /gene="antigen" exon 1630..1819 /gene="antigen" intron 1820..1961 /gene="antigen" exon 1962..2097 /gene="antigen" intron 2098..2161 /gene="antigen" exon 2162..2298 /gene="antigen" intron 2299..2558 /gene="antigen" exon 2559..2884 /gene="antigen" misc_feature 2567..2740 /note="product = Probe pBmCW3." intron 2885..3002 /gene="antigen" exon 3003..3253 /gene="antigen" /partial BASE COUNT 997 a 564 c 687 g 1005 t ORIGIN 1 gaattccgag atcgattttt tttttttgaa aactaacaat tctaattctt agtgcgcaaa 61 taagcaaaat aggggcgcaa ctatctataa gaaattgcgc aaaattggaa taaacaagca 121 actgatctca tataagtctt atcatctttt gaaaattttt tcacaatttc ttaactaatt 181 ttaaaacttc tttccattgc ttgcttatca gagaatgcaa atttaaattt cattttaaaa 241 gttactatct gcttgtgata acttttgttt tatctgtcag ttaacaatat aagcaagaaa 301 aaaattctaa aaaaaatctc aaattcattt ttgttatact taaaaatgtt aaacatttta 361 atttaattaa aaaaatttgc gcgttatatt attattataa ttcaaaattt aactattaaa 421 aaaatttttc cttcaatgaa ttaatttact ttactttact ttactttatg cttaagcatt 481 tatcatgata atcattctca ttctgaaaat attcaaacat ttaccagtat aaccaataat 541 aaaataaaca ttcagcaaat taataaaggt ttaatttaaa tggcgaaaag gaaggaaaag 601 aaaaaatttt agtaaacatt tgaaatcgtt gcatgtaact ttgttttgat acattcttat 661 ttacttactt actttatgct aatctaacag ctttctttca gaaagaatct ttcaatgaaa 721 gcttaatacc attttaaatg taatagttta tttgttttcg agtaatgcat atttatacat 781 gtatttttag ggtgaacctg gagaacctgg agcacgtgga tatccgggaa atgctggtgc 841 accaggacaa ccgggtttcc ctggaatgaa aggtgaaaaa ggattatctg gaccagctgg 901 accacgagta agtttttata gtaatttata ctcaataaat gattattcaa tatgatcatt 961 aattcattaa aggaaatatg caactgtttt tttaattcag ttttatttct attgcttttt 1021 tttttttgaa tatattttct aaattttcga attttttttt tttgtgaatt ttttttaatg 1081 ataaatggtt aaaattatat ggattttaag ttttgaagtt ttattcaaca ttaagagatt 1141 tgtaaaagtg attcaggcta ttcttgtgtt atttgtaggg taaagaagac gcctggctta 1201 ccaggcccac caggtttcaa gggtgatcga ggcttagatg gtttgccagg tgtgcctggt 1261 ttacctggtc aaaagggtga accaggtttt ccaggtcgag atggatcaaa aggagttcga 1321 ggtccaccag gaccaccagg agtaggtatt taatccttag agtttcagct acctctgtga 1381 tagtttatgc aatattttta aaaaaatgaa atgtgacaaa agcatccgtc gagattaaga 1441 ctgctactat gctccttgta taactgaaaa gttttaaaag gaaatcttac tgacagtact 1501 atgcgatcaa aaagattcca ttgacaattg attaattgtt cttctcataa atttctgatc 1561 taaaaggaag aatatttcat accaatttgt gagacaacac tttattttat tcaattataa 1621 taactatagg gcggtgattt tacggatgga ccgccgggac cacgtggatt accaggtcga 1681 gaagggcaac ctggtccacc gggtgttgac ggttatcctg ggccacctgg accaccaggc 1741 cctcaaggac caccaggtgg ccctggactt ccaggtttgc ctggtttaga aggaataccc 1801 ggaccaaaag gagcaaaagg ttggtaatat tattgcatat tttcctagca tatttcttag 1861 caatacttta tgctgaattt tttaactatg tcactttaca ggtgatgctg gtatcccagg 1921 tgctcctggt gtacctggac caccaggatt gcctgggcca cgaggaccta aaggtgagcc 1981 tgggccacgt ggtattgatg gaaagagtat tcccggtttg ccaggtaaag atggtagacc 2041 tggtttggat ggtttgcccg gaagaaaagg agaaatggga ttaccagggt gttcgaggta 2101 agtcaatttt tttttgacaa ttaaacaaag tgcagcaatt tgattctaaa aaaatccata 2161 gtttaggtcc tcctggtgat tcactgaatg gacttcctgg tccgccaggt tgcgagggac 2221 caccgggacc caaaggttat gacggacgag atggatgctc cggtttgcct ggtttacctg 2281 gacaaaaagg tgaccgtggt ggacgtgttt ggcttgtctt ccggaatgaa aggacaaaaa 2341 ggtaactttt aattgcagaa atcaatgaat cgataagttt ttcctgataa tttttctgaa 2401 attgaacatt tgttggagtg ttctgttcag gaaagttttg caaatgagga agtttatcaa 2461 aagattagag aatgattatt caggtaaacc tgataaaaga ttggctaaaa ggtagctggg 2521 tagaagatgc attacggtta ctattgccac cttttcaggc tctgctggtt atccgggctt 2581 gcctggacca caaggtgaaa ggggattacc aggagtgcca ggtgctcagg gtccccctgg 2641 agatgatgga atgcctggtg cgccaggaag acctggacca ccgggaccac ctggaaaaga 2701 cggcattccc ggtttaccag gacagaaggg tgaaccaaca catatgttgc ttcgaccagg 2761 accaccagga tatcggggtc agaagggtga agctggcttc ccaggcttgc ctggacaagt 2821 tggactacct gggaaatccg gaccacctgg tttgaccgga ttgcccggaa taccaggacc 2881 aaaggtcagc ataatattac aacatttcaa atttgaaaat ccaaaaatta gtactcatca 2941 aactccttaa tttatttttg taaatgaatg tatgataagt taacaacgtt gcattatttc 3001 agggcgaacc gggttttcct gggttgacag gaaaacctgg caaagacgga cttccaggtt 3061 ttcctggatt caaaggagct ccaggttacg gtgctccagg attgccagga cttccgggcc 3121 agaaaggaga agcgggactt cctggtctac caggagctca aggacctgtt ggaccaatgg 3181 gaccacctgt agccgaaagt cagctgaaac caggacctcc aggaaaagac ggattaccag 3241 gattgccggg ccc //