GenBank-Updates@genbank.bio.net (04/16/91)
LOCUS FRARRNA 6481 bp ds-DNA BCT 16-APR-1991
DEFINITION Frankia sp. 5S, 16S, and 23S ribosomal RNA genes, complete
sequences.
ACCESSION M55343
KEYWORDS 16S ribosomal RNA; 23S ribosomal RNA; 5S ribosomal RNA.
SOURCE Frankia sp. (strain CeD) DNA, clone O1RNA1.
ORGANISM Frankia sp.
Prokaryota; Bacteria; Firmicutes; Endospore-forming rods and cocci;
Actinomycetes with multilocular sporangia.
REFERENCE 1 (bases 1 to 6481)
AUTHORS Normand,P.
JOURNAL Unpublished (1990)
STANDARD simple staff_review
FEATURES Location/Qualifiers
promoter 117..146
/note="putative"
promoter 248..276
/note="putative"
rRNA 528..2039
/product="16S ribosomal RNA"
/gene="16S rRNA"
rRNA 2451..5549
/product="23S ribosomal RNA"
/gene="23S rRNA"
rRNA 5618..5736
/product="5S ribosomal RNA"
/gene="5S rRNA"
terminator 5737..5789
promoter 5841..5869
/note="putative"
CDS 5927..>6481
/note="open reading frame"
/codon_start=5927
BASE COUNT 1333 a 1592 c 2268 g 1288 t
ORIGIN
1 agatctcctc cgagggggcg tagacccccc gaggaaacgg gccgcggacg gtgcgataag
61 gtacgagagt ggcaaacacc ggtacgtggg taggttaact accgggccgg agtgatttga
121 cacaatcaag ccaaagctca taatctagga aaaacgttcc ggttgatcgc tttgaacgcg
181 aacgtccgga gtgtgcaaga aggtaagatc tgttcggatg tgaacatttc gcacaaaaag
241 aagcgatttg acaccgccgg gcaagccgag taacttaaag aagcaccaga acgaagccct
301 gagggtggag gtctggtagc gcctgctcct tgagaactca acagcgtgcc gattgtcagt
361 gccaattgtt ttaccccgtt catggcctgg ctgggtggtg tcccacgtgg tggggtggct
421 gtctggttgg gttgtgaggg attcctttgg acacggtggt gggcctgtga gggtctgctg
481 tcgatgtcgg ggtctgtcga tgtttttgca tcggcgctct caatgcattg atggagagtt
541 tgatcctggc tcaggacgaa cgctggcggc gtgcttaaca catgcaagtc gagcggggag
601 cttcggctct cagcggcgaa cgggtgagta acacgtgggc aacctgcccc gagctctgga
661 ataacctcgg gaaaccgggg ctaatgccgg atatgacatt gccgggcatc tggtggtgtg
721 gaaagattta tcggctcggg atgggcccgc ggcctatcag cttgttggtg gggtgatggc
781 ctaccaaggc gacgacgggt agccggcctg agagggcgac cggccacact gggactgaga
841 cacggcccag actcctacgg gaggcagcag tggggaatat tgcgcaatgg gcggaagcct
901 gacgcagcga cgccgcgtgg gggatgacgg ccttcgggtt gtaaacctct ttcagcaggg
961 acgaagcgag agtgacggta cctgcagaag aagcaccggc caactacgtg ccagcagccg
1021 cggtaatacg tagggtgcaa gcgttgtccg gaattattgg gcgtaaagag ctcgtaggcg
1081 gcctgttgcg tcggctgtga aaacccgggg ctcaactccg ggcctgcagt cgatacgggc
1141 aggctagagt ccggcagggg agactggaat tcctggtgta gcggtgaaat gcgcagatat
1201 caggaggaac accggtggcg aaggcgggtc tctgggccgg aactgacgct aaggagcgaa
1261 agcgtgggga gcgaacagga ttagataccc tggtagtcca cgccgtaaac gttgggcgct
1321 aggtgtgggg gaccttccac ggcctccgtg ccgcagctaa cgcattaagc gccccgcctg
1381 gggagtacgg ccgcaaggct aaaactcaaa ggaattgacg ggggcccgca caagcggcgg
1441 agcatgtggc ttaattcgat gcaacgcgaa gaaccttacc agggcttgac atgcagggaa
1501 atctcgtaga gatacggggt ccgtaagggt cctgcacagg tggtgcatgg ctgtcgtcag
1561 ctcgtgtcgt gagatgttgg gttaagtccc gcaacgagcg caaccctcgt cctatgttgc
1621 cagcgagtcg tgtcggggac tcataggaga ctgccggggt caactcggag gaaggtgggg
1681 atgacgtcaa gtcatcatgc cccttacgtc ctgggctgca cacatgctac aatggccggt
1741 acaaagggct gcgatgccgt gaggtggagc gaatcccaaa aagccggtct cagttcggat
1801 cggggtctgc aactcgaccc cgtgaagtcg gagtcgctag taatcgcaga tcagcaatgc
1861 tgcggtgaat acgttcccgg gccttgtaca caccgcccgt cacgtcacga aagtcggtaa
1921 cacccgaagc cggtggccta acccttgtgg ggggagccgt cgaaggtggg accggcgatt
1981 gggacgaagt cgtaacaagg tagccgtacc ggaaggtgcg gctggatcac ctcctttcta
2041 aggagcgtct ggctggtctg tcctgtagtg gggtgggctg gtgcagagcc agggccggct
2101 gtggatgccg gtctggttgc tcgtgggtgg aacgctgacg atggggtttc ggctggttgt
2161 ccggggtcta gtactcctct gtccttatct tcgggtgggg tggggggtgg aacggtccgg
2221 gtgggtggct ggggtccgtg gcacgctgtt gggtcctgag ggagtgaggc tctctcggct
2281 ggtgggttcc tgtgctgtgg tcctggtggg gatcgtggtg gggggtctgc tggtggaacg
2341 gaccggtcgt ggtggaggac tgccttcccg ttgggtgggg gtgggtttcg ccgggtcggc
2401 tggggccgtc cgtacgttga gaactgcaca gtggacgcga gcatctttgt ggccaagtta
2461 ttaagggcgc acggtggatg ccttggcacc aggagccgat gaaggacgtg ggaggctgcg
2521 atatgcctcg gggagctgtc aaccgagctg tgatccgagg atttccgaat ggggaaaccc
2581 ggcagggctt taaatcctgt cacccgtgcc tgaacacata gggcatgtgg agggaacgcg
2641 gggaagtgaa acatctcatt acccgcagga ggagaaaaca accgtgattc cgcgagtagt
2701 ggtgagcgaa agcggaacag gctaaaccag tgtcgtgtga gagccggcag gtgttgcgat
2761 gctggggttg tgggatcgtc caggtggagc tgccgttcca tcggggagtc agaaagagca
2821 ttgttaggcg aaggtcatgc gaatgggccg ccatagaggg taatagccct gtagccgaaa
2881 gcagtgttcc tcccggacgt gttcccaagt agcacggagc ccgtgtaatt ccgtgtgaat
2941 ctggcgggac cacccgctaa gcctaaatac tccctggtga ccgatagcgg actagtaccg
3001 tgagggaaag gtgaaaagta ccccgggagg ggagtgaaat agtacctgaa accgtgtgcc
3061 tacaatccgt gggagctgga ctgtggtctg gtgaccgcgt gccttttgaa gaatgagcct
3121 gcgagtttgc ggtgtgtggc gaggttaacc cgtgtggggt agccgtagcg aaagcgagtc
3181 cgaagagggc gttgagtcgc atgtccaaga cccgaagccg agtgatctac ccatggccag
3241 gttgaagcgc gggtaagacc gtgtggagga ccgaacccac cagggttgaa aacctggggg
3301 atgagctgtg ggtaggggtg aaaggccaat caaactcggt gatagctggt tctccccgaa
3361 atgcatttag gtgcagcgtc gcatgtttct tgccggaggt agagcactgg atggcctagg
3421 gggcccacaa gcttactgaa gtcagccaaa ctccgaatgc cggtaagtga agtgcggcag
3481 tgagactgcg ggggataagc ttcgtagtcg agagggaaac agcccagatc gccagctaag
3541 gcccctaagc gtgcgctaag tggaaaagga tgtggagtcg catagacaac caggtggtgc
3601 ttagaagcag ccacccttga aagagtgcgt aatagctcac tggtcaagtg attccgcgcc
3661 gacaatgtag cggggctcaa gcgcaccgcc gaagctgcgg catgcacaaa atttcccggc
3721 actttggtgt ccaggtttgt gtgtgggtag gggagcgtcg tgtggcgtgt gaagcggcgg
3781 ggtgacccag ccgtggatgc catacgagtg agaatgcagg catgagtagc gaatgacggg
3841 tgagaaaccc gtccgccgga tgaccaaggg ttcctggggc aggctaatcc gcccagggtg
3901 agtcgggacc taaggcgagg ccgacaggcg tagtcgatgg ataacgggtt gatattcccg
3961 taccggcgtt gacgcggcca tgctgaacct ggtttgtgct aaccatctga tcggatgtgt
4021 ctcttcggag gtgtgttcgg gagggtggga tcccggctgg tagtaggcaa gcgatggggt
4081 gacgaggaag gtagtccagc ccaggcggtg gttgtcctgg ggcaagggtg taggacgagg
4141 cgtaggtaaa tccgcgtctt gtgtgtctga gacctgatgc cgagccgatt gcggcgaagt
4201 gggtgatcct atgctgccga gaaaagcctc tagcgagtgt cagggccgcc cgtaccctaa
4261 accgacacag gaggtcaggt agagaatacc gaggcgttcg agtgaactgt ggttaaggaa
4321 ctcggcaaat gccccgtaac ttcggagaag gggggccgtt ctccgtgtag gggtttacct
4381 ccgaagcggg gagtggccgc agagaccagg ggaaagcgac tgtttactaa aaacacagct
4441 ccgtgctaag tcgtaagacg atgtatacgg agtgacgcct gcccggtgct ggaacgttaa
4501 ggggacgggt tagctcttcg gggcgaagct cagaacttaa gcgccagtaa acggcggtgg
4561 taactataac catcctaagg tagcgaaatt ccttgtcggg taagttccga cctgcacgaa
4621 tggcgtaacg actttcccac tgtctcaacc acagactcgg cgaaattgca ttacgagtaa
4681 agatgctcgt tacgcgcggc aggacggaaa gaccccggga cctttactat agcttgatat
4741 tggtgttcgg ttcggcttgt gtaggatagg tgggagactg tgaagctagg acgccagttc
4801 tggtggagtc gttgttgaaa taccactctg gtcgtactgg atgtctaacc tgggtccgtg
4861 atccggatca gggacagtgt caggtgggta gtttaactgg ggcggttgcc tcctaaaggg
4921 taacggaggc gcccaaaggt tccctcagcc tggttggcaa tcaggtgttg agtgcaagtg
4981 cacaagggag cttgactgtg agacagacat gtcgagcagg tgcgaaagca gggactagtg
5041 atccggcggt ggcttgtgga agcgccgtcg ctcaacggat aaaaggtacc ccggggataa
5101 caggctgatc ttgcccaaga gtccatatcg acggcaaggt ttggcacctc gatgtcggct
5161 cgtcgcatcc tggggctgga gtaggtccca agggttgggc tgttcgccca ttaaagcggt
5221 acgcgagctg ggtttagaac gtcgtgagac agttcggtcc ctatccgccg cgcgcgcagg
5281 agacttgaga agggctgtcc ctagtacgag aggaccggga cggacgaacc tctggtgtgc
5341 cagttgttct gccaagggca tggctggttg gctacgttcg gaagggataa ccgctgaaag
5401 catctaagcg ggaagcctgc ttcgagatga ggtctcccac agggtagcct ggtaaggccc
5461 ccgactagat gatcgggttg ataggccgga ggtggaagtg cggtgacgca tggagctgac
5521 cggtactaat aggccgaggg cttgtcttcg aaggtgctac gcgtccactg tgcggttctc
5581 gggtgtacgg ccggttcggc tggtatatct ggatagtgtt tcggtggttt tggcgaaggg
5641 gaaacgcccg gtctcattcc gaacccggaa gctaagctct tcagcgccga tggtactgca
5701 tgggggactg tgtgggagag taggacgccg ccggacgtat acgagtgtgg ggctgtctcc
5761 ctagggagac agccccacac tcgtatacgc gtattttccg actactggct ggagcacccg
5821 cttcagcacc ttggccgtgg tggcatctat tacatggatg tcctactatc gggagccaag
5881 tgttctaggt atctcgcccg ccacatcgtc cccgggagcc gcttcgatgt cctccgacgc
5941 gatgtcctcc gacaaccggc acgagccggc cgccacgctg cacacaccag ctcatccggt
6001 ccggatcgtg acggcggcct cactcttcga tgggcatgac gcggcgatca acatcatgcg
6061 tcgcctgttg caggcgcagg gcgccgaagt gatccatctc gggcatgacc gcagcgtcga
6121 ggaggtcgtc accgccgcga tccaggagga cgcccagggg atcgccctgt cgtcctatca
6181 gggcgggcat gtcgagtact tcagctacct catcgagcgc ctccgtgcgc gcggagccgg
6241 caacgtccgg gtctacggcg gcggcggcgg ggtgatcctg ccggcggaga tcgacctgct
6301 gcacgcgcgc ggggtcgcgc gcatcttctc cccgcaggac gggcagcggc tcggtctcgc
6361 aaagatgatc aatatgatca tcgaggcctg tgacgtcgat ctgacggagg acgggccgaa
6421 gctcgatgcg gtggcggctg gtgagcacgg cgcgctcgcc cgggcgatca ccgtgctcga
6481 g
//