GenBank-Updates@genbank.bio.net (02/05/91)
LOCUS FMDNPCAP 2277 bp ss-RNA VRL 05-FEB-1991
DEFINITION Foot-and-mouth disease virus capsid protein mRNA, partial cds.
ACCESSION M55287
KEYWORDS non-structural protein.
SOURCE Foot and mouth disease virus (strain O-2-Brescia) , cDNA to viral
RNA.
ORGANISM Foot and mouth disease virus O
Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses;
Picornaviridae; Aphthovirus.
REFERENCE 1 (bases 1 to 2277)
AUTHORS Krebs,O., Berger,H.G. and Marquardt,O.
TITLE The capsid protein-encoding sequence of foot-and-mouth disease
virus 0-2-Brescia and some sequence encoding nonstructural proteins
JOURNAL Unpublished (1990)
STANDARD full staff_entry
FEATURES Location/Qualifiers
CDS 1..2277
/gene="VP"
/codon_start=1
/partial
sig_peptide 1..57
/gene="VP"
/codon_start=1
/partial
mat_peptide 58..312
/gene="VP4"
/codon_start=58
mat_peptide 313..966
/gene="VP2"
/codon_start=313
mat_peptide 967..1626
/gene="VP3"
/codon_start=967
mat_peptide 1627..2265
/gene="VP1"
/codon_start=1627
mat_peptide 2266..2277
/gene="2A"
/codon_start=2266
/partial
BASE COUNT 584 a 681 c 549 g 457 t 6 others
ORIGIN
1 tacgaccaag aaccactcaa cgaggattgg aaaaccacng ttcataggaa gctcaagggc
61 gccgggcaat ccagcccgtc gactggctca caaaaccagt ctggcaatac tggcagcata
121 ataaacaact actacatgca acagtaccag aattccatgg acacacaact tggcgacaac
181 gccatcagtg gaggttccaa cgaaggctcc actgacacaa cttctactca cacaaccaac
241 acccagaaca atgactggtt ttccaaactt gcaagttctg cctttagcgg tctgttcggc
301 acccttcttg ctgacaaaaa gacagaggag accactctcc tggaagaccg catcctcacc
361 acccgcaacg gacacacgac ctcaacaacc cagtcgagtg tcggggtcac gtatgggtac
421 gcaacggctg aggattttgt gagcggacca aacacttctg gtctcgagac cagagttgtc
481 caggcagaac gcttcttcaa aacccacctt ttcgattggg tcaccagtga cccattcgga
541 cgctgccacc tcctggaact cccgactgat cacaaaggtg tctacggcag cctgaccgac
601 tcgtatgcat acatgagaaa cggntgggac gtcgaagtta ccgcggttgg caaccagttc
661 aacggaggat gcttactggt ggcaatggta ccagagcttt gttccatcca gaagagggag
721 ctgtaccagc tcacactttt ccctcaccag ttcatcaacc cgcgcacaaa catgactgca
781 cacatcaccg tgccctttgt tggcgtcaac cgctacgacc agtacaaggt tcacaaaccg
841 tggaccctng tggttatggt tgtggcgcct ttgactgtca acaatgaagg tgcccctcaa
901 atcaaggtgt acgccaacat tgccccaacc aacgttcaag ttgcgggcga gttcccttcc
961 aaagagggaa ttttccccgt ggcctgtagc gacggttacg gtggcctggt gaccacggac
1021 ccaaagacgg ctgaccccgt ttacgggaaa gtgttcaacc ccccccgcaa cttgttgcct
1081 gggcgtttca ccaattttct tgatgtggct gaggcttgtc cgacgtttct gcacttcgag
1141 ggtgacgtac cgtacgtgac cacgaaaaca gattcagaca ggctactcgc tcagtttgac
1201 atgtccttgg cagcaaagca catgtcgaac acctttcttg caggtctcgc acagtactac
1261 acacagtaca gcggcaccat caacctgcac ttcatgttta cagggcccac tgacgcgaaa
1321 gcgcgttaca tgattgctta tgccccacca ggcatggagc caccccgaac acctgaggcg
1381 gctgcacact gcattcatgc tgagtgggac actgggttaa attcaaagtt cacatttccc
1441 atcccttacc tctcagctgc tgattacgcg tacactgcgt ctgacgtngc tgaaaccaca
1501 aacgtgcaag gatgggtctg cttgtttcaa atcacacatg gcaaggccga cggtgacgca
1561 ctggtcgtgc tggctagcgc tggcaaagac tttgagctga gactgccggt ggacgcccgc
1621 agacaaacca cttccgcggg tgaatcagca gatcccgtga ctgccaccgt tgagagctac
1681 ggtggagaga cacaggtcca gaggcgccaa cacacggacg tctcgttcat catggacaga
1741 ttcgtgaaag tcacaccaac agaccaaacc aatgttttga acctcatgca gatcccatcc
1801 cacacactgg tgggagcact cctgcgtgca tccacatact acttctctga cttggagata
1861 gcagtaaagc acgagggaga tctcacctgg gtcccgaatg gggctcctga angtgcgctg
1921 gagaacacca ctaacccaac agcttaccat aaagctccac tcacccggct cgccctgcct
1981 tacacggcac cacaccgtgt gctggcaact gtgtacaacg gtgagtccag gtacagcaga
2041 aacgctgtgc cnaatgtgag aggtgacctc caggcgctgg cccaaaaggc ggcgagaacg
2101 ctgccgacct ctttcaacta cggtgccatt agagcaactc gggtcactga gctgctctac
2161 cggatgaaga gggctgagac gtactgtccc agacccctgc tggccattca cccaactgaa
2221 gccagacaca aacagaaaat tgtggcaccc gcaaaacaga ccttgaactt tgactta
//GenBank-Updates@genbank.bio.net (04/19/91)
LOCUS APHNPCAP 2277 bp ss-RNA VRL 19-APR-1991
DEFINITION Foot-and-mouth disease virus capsid protein mRNA, partial cds.
ACCESSION M55287
KEYWORDS non-structural protein.
SOURCE Foot and mouth disease virus (strain O-2-Brescia), cDNA to viral
RNA.
ORGANISM Foot and mouth disease virus
Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses;
Picornaviridae; Aphthovirus.
REFERENCE 1 (bases 1 to 2277)
AUTHORS Krebs,O., Berger,H.-G. and Marquardt,O.
TITLE The capsid protein-encoding sequence of foot-and-mouth disease
virus 0-2-Brescia and some sequence encoding nonstructural proteins
JOURNAL Unpublished (1990)
STANDARD full staff_entry
REFERENCE 2 (sites)
AUTHORS Krebs,O., Berger,H.-G. and Marquardt,O.
TITLE The capsid protein-encoding sequence of foot-and-mouth disease
virus 02Brescia
JOURNAL Arch. Virol. , 0-0 (1991)
STANDARD full staff_review
FEATURES Location/Qualifiers
CDS 1..2277
/gene="VP"
/codon_start=1
/partial
sig_peptide 1..57
/gene="VP"
/codon_start=1
/partial
mat_peptide 58..312
/gene="VP4"
/codon_start=58
mat_peptide 313..966
/gene="VP2"
/codon_start=313
mat_peptide 967..1626
/gene="VP3"
/codon_start=967
mat_peptide 1627..2265
/gene="VP1"
/codon_start=1627
mat_peptide 2266..2277
/gene="2A"
/codon_start=2266
/partial
BASE COUNT 584 a 681 c 549 g 457 t 6 others
ORIGIN
1 tacgaccaag aaccactcaa cgaggattgg aaaaccacng ttcataggaa gctcaagggc
61 gccgggcaat ccagcccgtc gactggctca caaaaccagt ctggcaatac tggcagcata
121 ataaacaact actacatgca acagtaccag aattccatgg acacacaact tggcgacaac
181 gccatcagtg gaggttccaa cgaaggctcc actgacacaa cttctactca cacaaccaac
241 acccagaaca atgactggtt ttccaaactt gcaagttctg cctttagcgg tctgttcggc
301 acccttcttg ctgacaaaaa gacagaggag accactctcc tggaagaccg catcctcacc
361 acccgcaacg gacacacgac ctcaacaacc cagtcgagtg tcggggtcac gtatgggtac
421 gcaacggctg aggattttgt gagcggacca aacacttctg gtctcgagac cagagttgtc
481 caggcagaac gcttcttcaa aacccacctt ttcgattggg tcaccagtga cccattcgga
541 cgctgccacc tcctggaact cccgactgat cacaaaggtg tctacggcag cctgaccgac
601 tcgtatgcat acatgagaaa cggntgggac gtcgaagtta ccgcggttgg caaccagttc
661 aacggaggat gcttactggt ggcaatggta ccagagcttt gttccatcca gaagagggag
721 ctgtaccagc tcacactttt ccctcaccag ttcatcaacc cgcgcacaaa catgactgca
781 cacatcaccg tgccctttgt tggcgtcaac cgctacgacc agtacaaggt tcacaaaccg
841 tggaccctng tggttatggt tgtggcgcct ttgactgtca acaatgaagg tgcccctcaa
901 atcaaggtgt acgccaacat tgccccaacc aacgttcaag ttgcgggcga gttcccttcc
961 aaagagggaa ttttccccgt ggcctgtagc gacggttacg gtggcctggt gaccacggac
1021 ccaaagacgg ctgaccccgt ttacgggaaa gtgttcaacc ccccccgcaa cttgttgcct
1081 gggcgtttca ccaattttct tgatgtggct gaggcttgtc cgacgtttct gcacttcgag
1141 ggtgacgtac cgtacgtgac cacgaaaaca gattcagaca ggctactcgc tcagtttgac
1201 atgtccttgg cagcaaagca catgtcgaac acctttcttg caggtctcgc acagtactac
1261 acacagtaca gcggcaccat caacctgcac ttcatgttta cagggcccac tgacgcgaaa
1321 gcgcgttaca tgattgctta tgccccacca ggcatggagc caccccgaac acctgaggcg
1381 gctgcacact gcattcatgc tgagtgggac actgggttaa attcaaagtt cacatttccc
1441 atcccttacc tctcagctgc tgattacgcg tacactgcgt ctgacgtngc tgaaaccaca
1501 aacgtgcaag gatgggtctg cttgtttcaa atcacacatg gcaaggccga cggtgacgca
1561 ctggtcgtgc tggctagcgc tggcaaagac tttgagctga gactgccggt ggacgcccgc
1621 agacaaacca cttccgcggg tgaatcagca gatcccgtga ctgccaccgt tgagagctac
1681 ggtggagaga cacaggtcca gaggcgccaa cacacggacg tctcgttcat catggacaga
1741 ttcgtgaaag tcacaccaac agaccaaacc aatgttttga acctcatgca gatcccatcc
1801 cacacactgg tgggagcact cctgcgtgca tccacatact acttctctga cttggagata
1861 gcagtaaagc acgagggaga tctcacctgg gtcccgaatg gggctcctga angtgcgctg
1921 gagaacacca ctaacccaac agcttaccat aaagctccac tcacccggct cgccctgcct
1981 tacacggcac cacaccgtgt gctggcaact gtgtacaacg gtgagtccag gtacagcaga
2041 aacgctgtgc cnaatgtgag aggtgacctc caggcgctgg cccaaaaggc ggcgagaacg
2101 ctgccgacct ctttcaacta cggtgccatt agagcaactc gggtcactga gctgctctac
2161 cggatgaaga gggctgagac gtactgtccc agacccctgc tggccattca cccaactgaa
2221 gccagacaca aacagaaaat tgtggcaccc gcaaaacaga ccttgaactt tgactta
//