GenBank-Updates@genbank.bio.net (04/23/91)
LOCUS TOMILV1A 1980 bp ss-mRNA PLN 23-APR-1991
DEFINITION L.esculentum threonine deaminase (Td) mRNA, 3' end.
ACCESSION M61914
KEYWORDS threonine deaminase; threonine dehydratase.
SOURCE L.esculentum floral organ, cDNA to mRNA.
ORGANISM Lycopersicon esculentum
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Asteridae; Solanales; Solanaceae.
REFERENCE 1 (bases 1 to 1980)
AUTHORS Samach,A., Hareven,D., Gutfinger,T., Ken-Dror,S. and Lifschitz,E.
TITLE Biosynthetic threonine deaminase gene of tomato: Isolation,
structure and upregulation in floral organs
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 88, 2678-2682 (1991)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
CDS <1..1785
/EC_number="4.2.1.16"
/product="threonine deaminase"
/gene="Td"
/codon_start=1
sig_peptide <1..150
/gene="Td"
/codon_start=1
mat_peptide 151..1782
/EC_number="4.2.1.16"
/product="threonine deaminase"
/gene="Td"
/codon_start=151
BASE COUNT 651 a 313 c 428 g 588 t
ORIGIN Chromosome IX.
1 gaattccttt gtttagcccc aacacgtagt ttttccacca atcccaaatt aacaaaaagt
61 attcctagcg atcatactag taccacgagt cgtattttca cataccaaaa catgcgtggc
121 tcaacgatga gaccattagc gttgccgtta aaaatgtcac caattgtttc tgtgccggat
181 attacagctc cggtggaaaa tgttccggct atcttgccaa aagtcgttcc cggagagttg
241 atagtgaata aaccaacggg gggcgatagc gatgaattgt ttcaatattt agttgatatt
301 ttggcatcgc cagtgtatga tgtagcgatc gaatcgccat tagagctagc agagaagctc
361 tcggataggc tcggagttaa tttttatatc aaaagagaag ataaacagag ggtgttttca
421 ttcaagctta gaggagctta caacatgatg agtaacctct caagggagga attagataaa
481 ggggttataa cagcatcagc tggaaatcat gcacaaggtg tagcattagc tggtcaaaga
541 cttaactgtg tagctaaaat tgtcatgcct acaaccaccc cacaaatcaa gattgatgcg
601 gttagagccc tgggaggtga tgtagttctt tatggtaaaa catttgatga agctcaaaca
661 cacgcgctgg aattgagtga aaaagacggg ctcaaataca tcccaccatt cgatgatcca
721 ggagtcatca aaggccaagg tacaattgga acagagataa accgtcaact gaaggacatt
781 cacgctgtgt ttatacctgt tggtggtggg ggtttgatag ctggtgttgc tacctttttc
841 aaacaaattg ccccaaatac aaaaattatt ggagttgagc catatggtgc agcttcaatg
901 acattgtcat tgcatgaagg acatagagtg aaattatcaa atgttgatac ttttgctgac
961 ggtgtagctg ttgcactagt tggtgaatac acttttgcaa aatgccaaga gttaattgat
1021 ggaatggtac ttgttgcaaa tgatggtatt agtgctgcaa taaaggatgt gtatgatgaa
1081 ggaaggaaca tattagagac atcaggtgca gtggccatag ctggagctgc agcctattgt
1141 gaattttata aaataaaaaa tgaaaatatt gtagcaattg caagtggagc taatatggat
1201 ttcagcaaac tacacaaagt tacagagtta gcagggttag gttcaggcaa agaggcttta
1261 ttggctactt ttatggtaga acaacaagga agcttcaaga catttgttgg acttgtgggc
1321 tctttgaatt ttactgaatt gacatacaga ttcacttctg aaaggaaaaa tgctctaatt
1381 ttgtacaggg ttaatgttga taaagaatca gatcttgaaa aaatgattga ggatatgaaa
1441 tcatcaaata tgactactct taatctctca cataatgaat tggttgtaga ccatctaaaa
1501 catttggttg gtggctcagc aaatatcagt gatgaaattt tcggtgaatt tattgtacct
1561 gagaaggctg aaactttaaa aacattctta gacgctttct cccctcgttg gaatataact
1621 ttatgccgtt accgtaatca gggagatata aatgcaagtt tgttgatggg attccaagtt
1681 cctcaagctg agatggatga gttcaaaaat caagctgata agcttggtta tccatatgaa
1741 cttgataatt ataatgaggc ttttaacctt gtagtaagtg agtgaagaaa taaaaaattt
1801 gttgttctaa gtttaaatta ttgaaaatcc taaaaaaaat aaaataataa tcgtgtcgta
1861 ccaatctact tagtaaggaa taattgatga attaacttgt tataagttaa tttcatattg
1921 tatgaataat aagatgcatg tatccaatgt aatgtaatgg ccttttaagt ttcagaattc
//GenBank-Updates@genbank.bio.net (04/23/91)
LOCUS TOMILV1B 4240 bp ds-DNA PLN 23-APR-1991
DEFINITION L.esculentum threonine deaminase (Td) gene, complete cds.
ACCESSION M61915
KEYWORDS threonine deaminase; threonine dehydratase.
SOURCE L.esculentum seedling leaf DNA.
ORGANISM Lycopersicon esculentum
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Asteridae; Solanales; Solanaceae.
REFERENCE 1 (bases 1 to 4240)
AUTHORS Samach,A., Hareven,D., Gutfinger,T., Ken-Dror,S. and Lifschitz,E.
TITLE Biosynthetic threonine deaminase gene of tomato: Isolation,
structure and upregulation in floral organs
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 88, 2678-2682 (1991)
STANDARD simple staff_entry
FEATURES Location/Qualifiers
mRNA join(<1..567,1142..1321,1495..1642,1928..2253,2390..2638,
3199..3272,3375..3492,3580..3714,3800..>4240)
/gene="Td"
/partial
exon <1..567
/number=1
/gene="Td"
CDS join(154..567,1142..1321,1495..1642,1928..2253,2390..2638,
3199..3272,3375..3492,3580..3714,3800..3943)
/product="threonine deaminase"
/gene="Td"
/codon_start=154
exon 1142..1321
/number=2
/gene="Td"
exon 1495..1642
/number=3
/gene="Td"
exon 1928..2253
/number=4
/gene="Td"
exon 2390..2638
/number=5
/gene="Td"
exon 3199..3272
/number=6
/gene="Td"
exon 3375..3492
/number=7
/gene="Td"
exon 3580..3714
/number=8
/gene="Td"
exon 3800..>4240
/number=9
/gene="Td"
BASE COUNT 1408 a 556 c 750 g 1526 t
ORIGIN
1 aattaagtgt gcatgaagtt cacgtaactc tctttcttta cctatatata ccccttaaac
61 ttagtgcaat tgatcatatc attaaaaaaa tattatattt ctctctactg aacaaagttt
121 tcgatttaat cagtattata agttgcaata aaaatggaat tcctttgttt agccccaaca
181 cgtagttttt ccaccaatcc caaattaaca aaaagtattc ctagcgatca tactagtacc
241 acgagtcgta ttttcacata ccaaaacatg cgtggctcaa cgatgagacc attagcgttg
301 ccgttaaaaa tgtcaccaat tgtttctgtg ccggatatta cagctccggt ggaaaatgtt
361 ccggctatct tgccaaaagt cgttcccgga gagttgatag tgaataaacc aacggggggc
421 gatagcgatg aattgtttca atatttagtt gatattttgg catcgccagt gtatgatgta
481 gcgatcgaat cgccattaga gctagcagag aagctctcgg ataggctcgg agttaatttt
541 tatatcaaaa gagaagataa acagagggta agttttttag ttttagtgtc tatattttta
601 ttgaagatcg acacatttga atttgtgtca cgtgagacca tgtgggggaa ggttttgata
661 tctttttttt ttatatatat atatatatat atttttaatt ataacttgaa cttcctattt
721 aaaaatagga atcaattaat tagtgaccac taacttatgt tactaaacaa taaaaataac
781 gaattattca agaaaaatta tgttacacat gtattttaaa gttataggtt caaatttact
841 attttttttc ttcagtttgt ttaaaaaaga aagaaccctt cacgtgacat gtttaagacc
901 taaagattaa aggacaggtt gatatatttg atataatttt aattctcata ctctgtgttg
961 aaaatactga attcaaatga atctcacaat tcaagattaa ttctcatact ctgcgttgaa
1021 aaatactgaa ttcagatgaa tctcacaatt cagtagatta attctcatac tctgcgttga
1081 aaaatactga attcagatga atctgacgtt acgtttcaaa aataatttgg ttattggtta
1141 ggtgttttca ttcaagctta gaggagctta caacatgatg agtaacctct caagggagga
1201 attagataaa ggggttataa cagcatcagc tggaaatcat gcacaaggtg tagcattagc
1261 tggtcaaaga cttaactgtg tagctaaaat tgtcatgcct acaaccaccc cacaaatcaa
1321 ggtaataatt taatttatgt gaatcggttt gattgtatac agtaaaagta tgatattttg
1381 attttttctt ctcaaaatac gaaaataaac tagtgccgtg ttaattaaaa cgaaaaaaaa
1441 actattgtga aattaattat ttttctaaca atcatgtttt ttttttttat acagattgat
1501 gcggttagag ccctgggagg tgatgtagtt ctttatggta aaacatttga tgaagctcaa
1561 acacacgcgc tggaattgag tgaaaaagac gggctcaaat acatcccacc attcgatgat
1621 ccaggagtca tcaaaggcca aggtactaac cgggggtggg ggtggtaatc taaaattgtc
1681 tgtaaagttg ataataaggt gagtcatcaa tatttaccta tgaagtaaat gtttagttag
1741 tcaaccaact gagctattaa gatttttttt ttttaaatag aggggagggg gaggggggag
1801 gggggaggat tggacgtcaa caaagtaaaa gttcagtcca gatagtcaac taattaagtt
1861 actaattttt cgtcttttac ttgtttaaat aatgatcatt atttacgtaa aattctgcgt
1921 acgtcaggta caattggaac agagataaac cgtcaactga aggacattca cgctgtgttt
1981 atacctgttg gtggtggggg tttgatagct ggtgttgcta cctttttcaa acaaattgcc
2041 ccaaatacaa aaattattgg agttgagcca tatggtgcag cttcaatgac attgtcattg
2101 catgaaggac atagagtgaa attatcaaat gttgatactt ttgctgacgg tgtagctgtt
2161 gcactagttg gtgaatacac ttttgcaaaa tgccaagagt taattgatgg aatggtactt
2221 gttgcaaatg atggtattag tgctgcaata aaggttagct agacacatca tcttttgtct
2281 ttttttttta tgtttcgcgt tcgatatttg gtatttattt tgaacacgtg aagttcagtc
2341 attttaagtc ggaattggat tgtttttttt tcttttgttg tcaaaatagg atgtgtatga
2401 tgaaggaagg aacatattag agacatcagg tgcagtggcc atagctggag ctgcagccta
2461 ttgtgaattt tataaaataa aaaatgaaaa tattgtagca attgcaagtg gagctaatat
2521 ggatttcagc aaactacaca aagttacaga gttagcaggg ttaggttcag gcaaagaggc
2581 tttattggct acttttatgg tagaacaaca aggaagcttc aagacatttg ttggacttgt
2641 aagttatctg cttcgattct ttaaaaatat cgtttcgtta tgtatagtga cgaatcaaga
2701 atttttattg agtgagtgga gttatataaa aatctatttg aactctttaa atatatcgtt
2761 tgatatctgc attgaagaat ttagaatttt cattaaaaga gtcgtttaga aaaatccact
2821 agttcagcta agaattaaga attttcattg aagggatcac atagaaaaat ttacctgttg
2881 catcgttgtt tgaactcatt aaaaatatga ttcggtaatt aggattttca ctaatagcgt
2941 ttgcattgtt gtttgaattt tttaaaatgt cgtttagtat atgtgttgaa gatttcagaa
3001 tttttattaa aggagttata tagaaaaaat ttacttcttg ctgttgttgt ttgtactcat
3061 taaaaaatat cgtttcatat caacttgttt gttcgtatat taattcaatc gattttgacc
3121 taacaatttt acaatgtttt tttttttata tatattatta tttgggataa aaattgaaat
3181 tttaactttg aattacaggt gggctctttg aattttactg aattgacata cagattcact
3241 tctgaaagga aaaatgctct aattttgtac aggtaattaa attaatttcc cttccaattt
3301 taaattttat tttgttattt tactattata ttcaattttt agattattaa ttaattatat
3361 tattgatttt gcagggttaa tgttgataaa gaatcagatc ttgaaaaaat gattgaggat
3421 atgaaatcat caaatatgac tactcttaat ctctcacata atgaattggt tgtagaccat
3481 ctaaaacatt tggtaatgtc cttttttaaa aaaatatata tatattatca ttttttaatt
3541 acttaacgaa taattatatt tattttattt tcttaatagg ttggtggctc agcaaatatc
3601 agtgatgaaa ttttcggtga atttattgta cctgagaagg ctgaaacttt aaaaacattc
3661 ttagacgctt tctcccctcg ttggaatata actttatgcc gttaccgtaa tcaggtaaat
3721 tatatacact gacaatataa taataacttg ggaggattta ttataattta atttttattt
3781 tattttattg ccatgacagg gagatataaa tgcaagtttg ttgatgggat tccaagttcc
3841 tcaagctgag atggatgagt tcaaaaatca agctgataag cttggttatc catatgaact
3901 tgataattat aatgaggctt ttaaccttgt agtaagtgag tgaagaaata aaaaatttgt
3961 tgttctaagt ttaaattatt gaaaatccta aaaaaaataa aataataatc gtgtcgtacc
4021 aatctactta gtaaggaata attgatgaat taacttgtta taagttaatt tcatattgta
4081 tgaataataa gatgcatgta tccaatgtaa tgtaatggcc ttttaagttt cattaagaaa
4141 ataattttat tattgtcaat tacttattca tagtaatcat aaaattcttg gatcattttt
4201 atcctttaat gatagaatat aagattgatc aaattctatc
//