GenBank-Updates@genbank.bio.net (04/23/91)
LOCUS HIVENVBA1A 3061 bp ds-DNA VRL 23-APR-1991
DEFINITION Human immunodeficiency virus type 1 nef gene, 5' end, tat gene,
partial cds and vpu, env and rev genes, complete cds.
ACCESSION M63929
KEYWORDS envelope protein; nef protein; rev protein; tat protein;
vpu protein.
SOURCE Human immunodeficiency virus type 1 (strain Ba-1) proviral DNA.
ORGANISM Human immunodeficiency virus type 1
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Retroviridae; Lentivirinae.
REFERENCE 1 (sites)
AUTHORS Hwang,S.S., Boyle,T.J., Lyerly,H.K. and Cullen,B.R.
TITLE The envelope V3 loop is the primary determinant of cell tropism in
HIV-1
JOURNAL Unpublished (1991)
STANDARD full staff_review
FEATURES Location/Qualifiers
CDS join(1..95,2520..2610)
/gene="tat"
/codon_start=2
/partial
CDS join(117..192,2520..2794)
/gene="rev"
/codon_start=117
exon 117..192
/number=1
/gene="tat"
exon 117..192
/number=1
/gene="rev"
CDS 209..454
/gene="vpu"
/codon_start=209
CDS 372..2936
/gene="env"
/codon_start=372
exon 2520..2610
/number=2
/gene="tat"
exon 2520..2794
/number=2
/gene="rev"
CDS 2938..3061
/gene="nef"
/codon_start=2938
/partial
BASE COUNT 1075 a 507 c 745 g 734 t
ORIGIN
1 agagccctgg aagcatccag gaagtcagcc taagactgct tgtaccactt gctattgtaa
61 aaagtgttgc tttcattgcc aagtttgctt cataacaaaa ggcttaggca tctcctatgg
121 caggaagaag cggagacagc gacgaagagc tcctcaagac agtgagactc atcaagtttc
181 tctatcaaag cagtaagtag tacatgtaat gcaagcttta caaatatcag caatagtagg
241 attagtagta gcagcaataa tagcaatagt tgtgtggacc atagtattca tagaatatag
301 gaaaatatta aggcaaagaa aaatagacag gataattgat agaataatag aaagagcaga
361 agacagtggc aatgagagtg acggagatca ggaagagtta tcagcactgg tggagatggg
421 gcatcatgct ccttgggatg ttaatgatct gtaatgctga ggaaaaattg tgggtcacag
481 tctattatgg ggtacctgtg tggaaagaag caaccaccac tctattttgt gcatcagatg
541 ctaaagcata tgatacagag gtacataatg tttgggccac acatgcctgt gtacccacag
601 accccaaccc acaagaagta gaattggaaa atgtgacaga aaattttaac atgtggaaaa
661 ataacatggt agaacagatg catgaggata taatcagttt atgggatcaa agcctaaagc
721 catgtgtaaa attaactcca ctctgtgtta ctttaaattg cactgatttg aggaatgcta
781 ctaatgggaa tgacactaat accactagta gtagcaggga aatgatgggg ggaggagaaa
841 tgaaaaattg ctctttcaaa atcaccacaa acataagagg taaggtgcag aaagaatatg
901 cactttttta tgaacttgat atagtaccaa tagataataa tagtaataat agatataggt
961 tgataagttg taacacctca gtcattacac aggcctgtcc aaagatatcc tttgagccaa
1021 ttcccataca ttattgtgcc ccggctggtt ttgcgattct aaagtgtaaa gataagaagt
1081 tcaatggaaa aggaccatgt tcaaatgtca gcacagtaca atgtacacat gggattaggc
1141 cagtagtatc aactcaactg ctgttaaatg gcagtctagc agaagaagag gtagtaatta
1201 gatccgaaaa tttcgcggac aatgctaaaa ccataatagt acagctgaat gaatctgtag
1261 aaattaattg tacaagaccc aacaacaata caagaaaaag tatacatata ggaccaggca
1321 gagcattata tacaacagga gaaataatag gagatataag acaagcacat tgtaacctta
1381 gtagagcaaa atggaatgac actttaaata agatagttat aaaattaaga gaacaatttg
1441 ggaataaaac aatagtcttt aagcattcct caggagggga cccagaaatt gtgacgcaca
1501 gttttaattg tggaggggaa tttttctact gtaattcaac acaactgttt aatagtactt
1561 ggaatgttac tgaagagtca aataacactg tagaaaataa cacaatcaca ctcccatgca
1621 gaataaaaca aattataaac atgtggcaga aagtaggaag agcaatgtat gcccctccca
1681 tcagaggaca aattagatgt tcatcaaata ttacagggct gctattaaca agagatggtg
1741 gtccagaggc aaacaagacc gaggtcttca gacctggagg aggagatatg agggacaatt
1801 ggagaagtga attatataaa tataaagtag taaaaattga accattagga gtagcaccca
1861 ccaaggcaaa gagaagagtg gtgcagagag aaaaaagagc agtgggaata ggagctgtgt
1921 tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcaatg acgctgacgg
1981 tacaggccag actattattg tctggtatag tgcaacagca gaacaatctg ctgagggcta
2041 ttgaggcgca acagcatctg ttgcaactca cagtctgggg catcaagcag ctccaggcaa
2101 gagtcctggc tgtggaaaga tacctaaggg atcaacagct cctgggaatt tggggttgct
2161 ctggaaaact catttgcacc actgctgtgc cttggaatgc tagttggagt aataaatctc
2221 tgaataagat ttgggataac atgacctgga tggagtggga cagagaaatt aacaattaca
2281 caagcataat atatagctta attgaagaat cgcagaacca acaagaaaag aatgaacaag
2341 aattattaga attagacaaa tgggcaagtt tgtggaattg gtttgacata acagaatggc
2401 tgtggtatat aaaaatattc ataatgataa taggaggctt gataggttta agaatagttt
2461 tttctgtact ttctataatg aatagagtta ggcagggata ctcaccatta tcgtttcaga
2521 cccacctccc agcctcgagg ggacccgaca ggcccggagg aatcgaagaa gaaggtggag
2581 agagagacag agacagatcc ggtccattag tgaacggatt cttggcactt atctgggtcg
2641 atctgcgggg cctgtgcctc ttcagttacc accgcttgag agacttactc ttgattgtga
2701 cgaggattgt ggaacttctg ggacgcaggg ggtgggaatt cctcaaatat tggtggaatc
2761 tcctacagta ttggagtcag gaactaaaga atagtgctgt tagcttgctc aataccatag
2821 ccatagcagt agctgaaggg acagataggg ttatagaagt attacaaaga gctgttagag
2881 ctattctcca catacctaga agaataagac agggattgga aagggctttg ctataagatg
2941 ggtggcaagt ggtcaaaaag tagtatagtt ggatggcctg aagtaagaga aagaatgaga
3001 cgaactgagc cacgagctga gccagcagca gatggggtgg gagcagcatc tcgagaccta
3061 g
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