GenBank-Updates@genbank.bio.net (04/23/91)
LOCUS HIVENVBA1A 3061 bp ds-DNA VRL 23-APR-1991 DEFINITION Human immunodeficiency virus type 1 nef gene, 5' end, tat gene, partial cds and vpu, env and rev genes, complete cds. ACCESSION M63929 KEYWORDS envelope protein; nef protein; rev protein; tat protein; vpu protein. SOURCE Human immunodeficiency virus type 1 (strain Ba-1) proviral DNA. ORGANISM Human immunodeficiency virus type 1 Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Retroviridae; Lentivirinae. REFERENCE 1 (sites) AUTHORS Hwang,S.S., Boyle,T.J., Lyerly,H.K. and Cullen,B.R. TITLE The envelope V3 loop is the primary determinant of cell tropism in HIV-1 JOURNAL Unpublished (1991) STANDARD full staff_review FEATURES Location/Qualifiers CDS join(1..95,2520..2610) /gene="tat" /codon_start=2 /partial CDS join(117..192,2520..2794) /gene="rev" /codon_start=117 exon 117..192 /number=1 /gene="tat" exon 117..192 /number=1 /gene="rev" CDS 209..454 /gene="vpu" /codon_start=209 CDS 372..2936 /gene="env" /codon_start=372 exon 2520..2610 /number=2 /gene="tat" exon 2520..2794 /number=2 /gene="rev" CDS 2938..3061 /gene="nef" /codon_start=2938 /partial BASE COUNT 1075 a 507 c 745 g 734 t ORIGIN 1 agagccctgg aagcatccag gaagtcagcc taagactgct tgtaccactt gctattgtaa 61 aaagtgttgc tttcattgcc aagtttgctt cataacaaaa ggcttaggca tctcctatgg 121 caggaagaag cggagacagc gacgaagagc tcctcaagac agtgagactc atcaagtttc 181 tctatcaaag cagtaagtag tacatgtaat gcaagcttta caaatatcag caatagtagg 241 attagtagta gcagcaataa tagcaatagt tgtgtggacc atagtattca tagaatatag 301 gaaaatatta aggcaaagaa aaatagacag gataattgat agaataatag aaagagcaga 361 agacagtggc aatgagagtg acggagatca ggaagagtta tcagcactgg tggagatggg 421 gcatcatgct ccttgggatg ttaatgatct gtaatgctga ggaaaaattg tgggtcacag 481 tctattatgg ggtacctgtg tggaaagaag caaccaccac tctattttgt gcatcagatg 541 ctaaagcata tgatacagag gtacataatg tttgggccac acatgcctgt gtacccacag 601 accccaaccc acaagaagta gaattggaaa atgtgacaga aaattttaac atgtggaaaa 661 ataacatggt agaacagatg catgaggata taatcagttt atgggatcaa agcctaaagc 721 catgtgtaaa attaactcca ctctgtgtta ctttaaattg cactgatttg aggaatgcta 781 ctaatgggaa tgacactaat accactagta gtagcaggga aatgatgggg ggaggagaaa 841 tgaaaaattg ctctttcaaa atcaccacaa acataagagg taaggtgcag aaagaatatg 901 cactttttta tgaacttgat atagtaccaa tagataataa tagtaataat agatataggt 961 tgataagttg taacacctca gtcattacac aggcctgtcc aaagatatcc tttgagccaa 1021 ttcccataca ttattgtgcc ccggctggtt ttgcgattct aaagtgtaaa gataagaagt 1081 tcaatggaaa aggaccatgt tcaaatgtca gcacagtaca atgtacacat gggattaggc 1141 cagtagtatc aactcaactg ctgttaaatg gcagtctagc agaagaagag gtagtaatta 1201 gatccgaaaa tttcgcggac aatgctaaaa ccataatagt acagctgaat gaatctgtag 1261 aaattaattg tacaagaccc aacaacaata caagaaaaag tatacatata ggaccaggca 1321 gagcattata tacaacagga gaaataatag gagatataag acaagcacat tgtaacctta 1381 gtagagcaaa atggaatgac actttaaata agatagttat aaaattaaga gaacaatttg 1441 ggaataaaac aatagtcttt aagcattcct caggagggga cccagaaatt gtgacgcaca 1501 gttttaattg tggaggggaa tttttctact gtaattcaac acaactgttt aatagtactt 1561 ggaatgttac tgaagagtca aataacactg tagaaaataa cacaatcaca ctcccatgca 1621 gaataaaaca aattataaac atgtggcaga aagtaggaag agcaatgtat gcccctccca 1681 tcagaggaca aattagatgt tcatcaaata ttacagggct gctattaaca agagatggtg 1741 gtccagaggc aaacaagacc gaggtcttca gacctggagg aggagatatg agggacaatt 1801 ggagaagtga attatataaa tataaagtag taaaaattga accattagga gtagcaccca 1861 ccaaggcaaa gagaagagtg gtgcagagag aaaaaagagc agtgggaata ggagctgtgt 1921 tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcaatg acgctgacgg 1981 tacaggccag actattattg tctggtatag tgcaacagca gaacaatctg ctgagggcta 2041 ttgaggcgca acagcatctg ttgcaactca cagtctgggg catcaagcag ctccaggcaa 2101 gagtcctggc tgtggaaaga tacctaaggg atcaacagct cctgggaatt tggggttgct 2161 ctggaaaact catttgcacc actgctgtgc cttggaatgc tagttggagt aataaatctc 2221 tgaataagat ttgggataac atgacctgga tggagtggga cagagaaatt aacaattaca 2281 caagcataat atatagctta attgaagaat cgcagaacca acaagaaaag aatgaacaag 2341 aattattaga attagacaaa tgggcaagtt tgtggaattg gtttgacata acagaatggc 2401 tgtggtatat aaaaatattc ataatgataa taggaggctt gataggttta agaatagttt 2461 tttctgtact ttctataatg aatagagtta ggcagggata ctcaccatta tcgtttcaga 2521 cccacctccc agcctcgagg ggacccgaca ggcccggagg aatcgaagaa gaaggtggag 2581 agagagacag agacagatcc ggtccattag tgaacggatt cttggcactt atctgggtcg 2641 atctgcgggg cctgtgcctc ttcagttacc accgcttgag agacttactc ttgattgtga 2701 cgaggattgt ggaacttctg ggacgcaggg ggtgggaatt cctcaaatat tggtggaatc 2761 tcctacagta ttggagtcag gaactaaaga atagtgctgt tagcttgctc aataccatag 2821 ccatagcagt agctgaaggg acagataggg ttatagaagt attacaaaga gctgttagag 2881 ctattctcca catacctaga agaataagac agggattgga aagggctttg ctataagatg 2941 ggtggcaagt ggtcaaaaag tagtatagtt ggatggcctg aagtaagaga aagaatgaga 3001 cgaactgagc cacgagctga gccagcagca gatggggtgg gagcagcatc tcgagaccta 3061 g //