GenBank-Updates@genbank.bio.net (04/30/91)
LOCUS QULTPMY11 693 bp ds-DNA VRT 30-APR-1991
DEFINITION Quail gene for alpha-tropomyosin, exon 12.
ACCESSION X16240 X14883
KEYWORDS alpha-tropomyosin; alternative splicing; tropomyosin.
SEGMENT 11 of 12
SOURCE Coturnix coturnix.
ORGANISM Coturnix coturnix
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Aves;
Neornithes; Neognathae; Galliformes; Phasianidae.
REFERENCE 1 (bases 1 to 693)
AUTHORS Lindquester,G.J.
JOURNAL Unpublished (1989) see COMMENT for author address
STANDARD simple automatic
REFERENCE 2 (bases 1 to 693)
AUTHORS Lindquester,G.J., Flach,J.E., Fleenor,D.E., Hickman,K.H. and
Devlin,R.B.
TITLE Avian tropomyosin gene expression
JOURNAL Nucleic Acids Res. 17, 2099-2118 (1989)
STANDARD simple automatic
COMMENT *source: library=lambda Charon4A; strain=Japanese. see X16230 -
X16241 for alpha-tropomyosin gene exons 1-13. splicing pathways:
skeletal muscle type : exons 1/3/5-10/11/12 smooth muscle type :
exons 1/2/5-10/13 nonmuscle type : exons 4/5-10/?
Data kindly reviewed (18-SEP-1989) by Lindquester G.J.
EMBL features not translated to GenBank features:
key from to description
SITE 408 413 put. polyA signal
SITE 489 493 put. polyA signal
POLYA 508 508 polyA site
Submitted (03-AUG-1989) to the EMBL Data Library.
FEATURES Location/Qualifiers
intron <1..218
/note="intron XI"
CDS join(X16230:690..803,X16230:1469..1594,X16236:838..971,
X16237:44..161,X16237:281..351,X16237:1167..1242,
X16238:177..239,X16238:504..573,X16239:930..1008,219..222)
/note="tropomyosin, skm (AA 126-164)"
/codon_start=690
exon 219..222
/note="tropomyosin, skm"
BASE COUNT 158 a 141 c 122 g 272 t
ORIGIN
1 atttttcatt ggatattgca gatggaaaac aggcttcaaa tgtagccctc tggtacatga
61 ggaaattgct atcgcattcc aatcccagca ttgtgtggca tttcactagc agtcatcccg
121 gcatgctcca ttttgctgtg ctgttattgc ttcttttgga cttcttagtg cacttttttt
181 taatgtccta ccttatgtca ctttttcttt ttgtgcagat aattttcttt gcttcacttc
241 tccaaagaca tcttcatcgg gttggataaa acatctttcc aagcttttgg atgtttcatg
301 gctccctgtc ctgtcttcta gcttacttgg ctctatcttt ctggcacctg tttcagaaca
361 tgctctttgt gctctattgt acagaaactc tacatctcta aatgtaaaat aaacatccca
421 gctgtattcc tttggctatc cccttgcctt taatttattc aaatagctat tttagttatt
481 aataaaaaaa taaaatgttg tgtgggtttt tttttgccat cagagatttt gtttttgttc
541 atgtttgctt tttttagttc cccccccaac gcttttgcct taatgttaaa aatgcaaagg
601 cagcggtagc tgtctgtggg cttatgaatg cagttaaaat gacaaatata gtgggaattt
661 tctcagttgt tattgttggg ccagcatctg cag
//