GenBank-Updates@genbank.bio.net (04/30/91)
LOCUS QULTPMY12 1972 bp ds-DNA VRT 30-APR-1991 DEFINITION Quail gene for alpha-tropomyosin, exon 13. ACCESSION X16241 X14883 KEYWORDS alpha-tropomyosin; alternative splicing; tropomyosin. SEGMENT 12 of 12 SOURCE Coturnix coturnix. ORGANISM Coturnix coturnix Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Aves; Neornithes; Neognathae; Galliformes; Phasianidae. REFERENCE 1 (bases 1 to 1972) AUTHORS Lindquester,G.J. JOURNAL Unpublished (1989) see COMMENT for author address STANDARD simple automatic REFERENCE 2 (bases 1 to 1972) AUTHORS Lindquester,G.J., Flach,J.E., Fleenor,D.E., Hickman,K.H. and Devlin,R.B. TITLE Avian tropomyosin gene expression JOURNAL Nucleic Acids Res. 17, 2099-2118 (1989) STANDARD simple automatic COMMENT *source: library=lambda Charon4A; strain=Japanese. see X16230 - X16241 for alpha-tropomyosin gene exons 1-13. splicing pathways: skeletal muscle type : exons 1/3/5-10/11/12 smooth muscle type : exons 1/2/5-10/13 nonmuscle type : exons 4/5-10/? Data kindly reviewed (18-SEP-1989) by Lindquester G.J. EMBL features not translated to GenBank features: key from to description SITE 972 977 put. polyA signal SITE 1145 1150 put. polyA signal POLYA 1180 1180 polyA site Submitted (03-AUG-1989) to the EMBL Data Library. FEATURES Location/Qualifiers intron <1..252 /note="intron XII" CDS join(X16230:690..803,X16230:1777..1902,X16236:838..971, X16237:44..161,X16237:281..351,X16237:1167..1242, X16238:177..239,X16238:504..573,251..333) /note="tropomyosin, smm (AA 258-284)" /codon_start=690 exon 251..333 /note="tropomyosin, smm (AA 258-284)" BASE COUNT 561 a 372 c 421 g 617 t 1 others ORIGIN 1 acagatctca tctgtcgagt gcatttctag cagtgcacct gcaaacagtc taaagtgtat 61 gcctgctgtt gttgtcttaa ttgaaattct ttctagacgt attctctgag ggtatcagta 121 tttatgatca tgcatatttc tcaccttccg agcctttaat tagaaatgat cactgcatgc 181 cttcatgttc tgagaatcgg tgcctctgaa gaactgctat tcatgttttg attttctgat 241 cccacaacag agaaagtggc gcatgccaaa gaagaaaacc ttaatatgca tcagatgctg 301 gatcaaactt tactggagtt aaacaacatg tgaaaacctt cttagcagca accacattgt 361 tattattttt acacctgctt gccgtgaagc cccataaaca tgtctttatt ttagtttcac 421 cacagtcaca acaacatcag ctaaattatc aggcagggtc aggaagtacc aaaaagggca 481 agctgtatgc gggttaagct atttcattat ggtttaaatg tgccatttcc ccaacaaaat 541 gttacctaca ctttgtagag agttcagaga ttggaatgct tagtctttgg aataatcctg 601 gctctgtcag gtagcgtccc acctcaagtg ccaaccacag ttttgaacaa gcatgataca 661 tcctcaaaaa agatccagca taaagggtgc tatttggatc caaaagctct gtaggggctt 721 ttatttgata cccgatgagt caggacttgt tgagcacagt aatttatttt tatcagcatt 781 ttactgatct gtgaggattt ggactttgtg cctttgattt caatagaacg aaggctgtgt 841 ggtcaacaca gtaaaacaaa ggcttatgaa ggttttaaat tgtaaacttg caactcgtta 901 cataagtgta ggtcaacatt tccgcttgag tattcttcat tgtatttttc atgttcaaat 961 gaaagattca ataaattcag gagaaaacac aaatttggaa gagattgttt aaaatgtatt 1021 ttatttgtgt ggagcttggg gcgggggtgg acttacaaat cgatattcgc ctcactttat 1081 ttttcacact ttctttgagc agtttaaagt atacctgtat gtaaacattg tataatgata 1141 tgaataaaat gcacatttta ggaatttttt aaatcgtacc tctccttgga ttttcatcat 1201 cctaatgtct gtattgctgt gtaaaactat atattggcac tgtctcactg ggtacatcgt 1261 tacacatggt tttcagtttc ccctntgctt ttaagctagc atataagaaa agcatgaaat 1321 gcagtggttt ggacttaggt ggatctgcag ctgcttaggg ggaccatact gtgagaatct 1381 atcccccccc ccccatcact tgattgtgtt tccagatgga tgcaggcagc gaccatcact 1441 caagggaaga cagacattaa agtaaaatgt aaaagcagta aaagcactgc atatctttca 1501 taataatttt caccccttct ttttctttag tacatcactg aaagctgatg ctgtacatcc 1561 ttctagcaga aaggagcttg gtaggagaca gttatagata gccctccaga tcatcagagg 1621 atctccttag caagcaactg aaatcaagag gctcagcagc ttgtgtagca gtaaaggtaa 1681 agttgtacac ggtgggtcat ttaaagggag tcgtagggtg gtggttttgg tgggatggag 1741 gaagggttgt tttgttatgt ttttttattt tgaatgaaag gcagaagttt gcagcattgc 1801 aggccttcat tggctgctgt gaagtcaacc tgagtggaaa ggagatgcgt ggattcacat 1861 tcccatgtaa gtaagtgcct ttgggaggca aaataagtgt taaaaggctc tggtagtgcc 1921 ttaagcttgc atcctgcagg tcgactctag accatccccg ggtaccgagc tc //