GenBank-Updates@genbank.bio.net (05/01/91)
LOCUS SHDTOXAB 1320 bp ds-DNA BCT 01-MAY-1991 DEFINITION S.dysenteriae toxin alpha- and beta-subunit gene, complete cds. ACCESSION X07903 M32511 KEYWORDS enterotoxin; toxin. SOURCE S.dysenteriae DNA, clone pCH79. ORGANISM Shigella dysenteriae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 1320) AUTHORS Kozlov,Y.V., Kabishev,A.A., Fedchenko,V.I. and Baev,A. TITLE Cloning and primary structure of Shigella toxin genes JOURNAL Dokl. Biochem. 295, 216-220 (1987) STANDARD simple automatic REFERENCE 2 (bases 1 to 1320) AUTHORS Kozlov,Y.V., Kabishev,A.A., Fedchenko,V.I. and Baev,A.A. TITLE Cloning and primary structure of Shigella toxin genes JOURNAL Dokl. Biochem. 295, 740-744 (1987) STANDARD simple automatic COMMENT EMBL features not translated to GenBank features: key from to description PRM 66 72 put.-35 region PRM 91 96 put.-10 region RBS 112 117 put.rRNA binding site RPT 997 1004 direct repeat 1 INVREP 1008 1014 inverted repeat A INVREP 1018 1024 inverted repeat A' RPT 1022 1030 direct repeat 1 PRM 1028 1033 put.-35 region RBS 1075 1078 put.rRNA binding site FEATURES Location/Qualifiers CDS 129..1076 /note="toxin alpha-subunit precursor" /codon_start=129 sig_peptide 129..194 /note="toxin alpha-subunit signal peptide" /codon_start=129 mat_peptide 195..1073 /note="toxin alpha-subunit" /codon_start=195 CDS 1086..>1320 /note="toxin beta-subunit precursor" /codon_start=1086 sig_peptide 1086..1145 /note="toxin beta-subunit signal peptide" /codon_start=1086 mat_peptide 1146..>1320 /note="toxin beta-subunit" /codon_start=1146 BASE COUNT 359 a 223 c 316 g 422 t ORIGIN 1 gaatatgatt atcattttca ttacgttatt gttacgttta tccggtgcgc cgtaaaacgc 61 cgtccttcag ggcgtggagg atgtcaagaa tatagttatc gtatggtgct caaggagtat 121 tgtgtaatat gaaaataatt atttttagag tgctaacttt tttctttgtt atcttttcag 181 ttaatgtggt tgcgaaggaa tttaccttag acttctcgac cgcaaagacg tatgtagatt 241 cgctgaatgt cattcgctct gcaataggta ctccattaca gactatttca tcaggaggta 301 cgtctttact gatgattgat agtggcacag gggataattt gtttgcagtt gatgtcagag 361 ggatagatcc agaggaaggg cggtttaata atctacggct tattgttgaa cgaaataatt 421 tatatgtgac aggatttgtt aacaggacaa ataatgtttt ttatcgcttt gctgattttt 481 cacatgttac ctttccaggt acaacagcgg ttacattgtc tggtgacagt agctatacca 541 cgttacagcg tgttgcaggg atcagtcgta cggggatgca gataaatcgc cattcgttga 601 ctacttctta tctggattta atgtcgcata gtggaacctc actgacgcag tctgtggcaa 661 gagcgatgtt acggtttgtt actgtgacag ctgaaccttt acgttttcgg caaatacaga 721 ggggatttcg tacaacactg gatgatctca gtgggcgttc ttatgtaatg actgctgaag 781 atgttgatct tacattgaac tggggaaggt tgagtagtgt cctgcctgac tatcatggac 841 aagactctgt tcgtgtagga agaatttctt ttggaagcat taatgcaatt ctgggaagcg 901 tggcattaat actgaattgt catcatcatg catcgcgagt tgccagaatg gcatctgatg 961 agtttccttc tatgtgtccg gcagatggaa gagtccgtgg gattacgcac aataaaatat 1021 tgtgggattc atccactctg ggggcaattc tgatgcgcag aactattagc agttgagggg 1081 gtaaaatgaa aaaaacatta ttaatagctg catcgctttc atttttttca gcaagtgcgc 1141 tggcgacgcc tgattgtgta actggaaagg tggagtatac aaaatataat gatgacgata 1201 cctttacagt taaagtgggt gataaagaat tatttaccaa cagatggaat cttcagtctc 1261 ttcttctcag tgcgcaaatt acggggatga ctgtaaccat taaaactaat gcctgtcata //