GenBank-Updates@genbank.bio.net (04/10/91)
LOCUS BNOCLPBA 2441 bp ds-DNA BCT 10-APR-1991
DEFINITION B.nodosus clpB gene encoding a regulatory subunit of ATP-dependent
protease.
ACCESSION M32229
KEYWORDS ATP-dependent protease.
SOURCE B.nodosus serotype A1 DNA, clones pBA12[1,6].
ORGANISM Bacteroides nodosus
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Anaerobic gram-negative straight, curved and helical rods;
Bacteroidaceae.
REFERENCE 1 (bases 1 to 2441)
AUTHORS Hobbs,M., Dalrymple,B.P. and Mattick,J.S.
JOURNAL Unpublished (1990) Univ. Queensland, St. Lucia, Queensland 4067
Australia
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence kindly submitted
by M. Hobbs, 20-FEB-1990.
FEATURES Location/Qualifiers
CDS complement(<1..2192)
/note="regulatory subunit"
/product="ATP-dependent protease"
/gene="clpB"
/codon_start=2192
BASE COUNT 632 a 656 c 436 g 717 t
ORIGIN
1 gccagcaatt gaatcatatc ggagcccaaa ttggaggtca taataatcac cgtgtgacga
61 aaatcgaccg ttctaccttg cccatcagtc aaacgacctt catctaaaac ctgcaataac
121 gtattaaaaa catcgctatg cgctttttcc acctcatcaa ataacaccac gctatacggt
181 ttgcgccgca cggcttccgt taaataaccg ccttgatcgt agccaacata acccggcggc
241 gccccaatta aacgtgcaac actatgtttt tccatgaatt cgctcatatc gatgcgcacc
301 atattttctt cactatcaaa caaaaattgc gccaaagtac ggcataattc agttttacca
361 acacccgtcg ggcccaaaaa taaaaaagaa ccaattggac gttttgggtc agataatccc
421 gcgcgattgc gccgaatcgc gttggcaacc gcttcaactg ccgttttttg tcctaccacg
481 cgttcattta ataccgtttc caaatgcaat aaacgctctt tttcgccttc catcattttg
541 gcaaccggaa tccccgtcca acgggaaacg atttccgcga tttcttcagc ggtcacttta
601 ttacgcatta aacgatgcgg acgttgttcc gtttgttgtt cattttcaag caattgcttt
661 tcttttgccg gaatcaaacc atattgaatt tcgctcgcgc gcgcaaaatc gccgcgccgt
721 tttgccgctt ccaattccac gcgtaattta tctaattgct ccttaatttc ggcggcgcct
781 gcgtttcccg ctttttctgc caaccaaatc tcttctaaat cggcatattc tttttcttgc
841 gcggcaattt ctgcttctaa atcgctcaaa cgtcttttcg acgccgcatc ggtttctttt
901 tccagcgcca ttcgctcgat ttgcaattga atcaaccgcc gatcaatttt atccatcact
961 tccggtttac tatccaattc catgcgaatt tgcgctgcgg cttcgtccat caaatcgata
1021 gctttatcgg gcaattttcg tccgctgata taacgatgcg acaactgcgc cgctgccacc
1081 aacgccggat ccgtaatatt aatgccgtga tgcacttcat aacgttcctg caaattgcgc
1141 aaaatcgcaa tcgtatcttc aacgctgggt tcatcaacga tcaccttttg aaaacgccgt
1201 tccagcgccg catctttttc catatattga cgatattcgt ccaaagtcgt tgcaccaatg
1261 caatgcaaat cgccgcgcgc aagcgctggt ttgagcatat tgccggcatc taaagaacct
1321 tcacttttgc ccgcgccaac catggtatga atttcatcga taaataaaat aatttgccca
1381 tcggctttcg tgatttcatc taaaacggct tttagccgtt cttcaaattc accgcggtat
1441 ttcgtgccgg ctaataacgc cgctaaatct aaagataaca aacgtttacc ttttaaactt
1501 tccggcacag cgcgatccgc gattctttgc gccaaacctt ccacaattgc cgttttaccg
1561 acgcccggct cgccaatcaa tacgggatta tttttactac gacgttgaag aatttgcatc
1621 gcgcggcgaa tttcctcatc gcgaccaatg acgggatcga ttttgccatc taacggccgc
1681 tgcgtaacgt ctaaggtata ttttttcaat gcaccgcgtt tatcttcagc gtattcatct
1741 gtcaccgcct cgccgccgcg caccgcatca attgctgcca ccaccgccgc tttttccaaa
1801 ccgttggcac gcaacaattg ctccaaatcc ccttttgcat cataaaccgc gcgcaaaaag
1861 agctcggaag aaatatattc atcgccattt tgttgcgcgt atttatcgca taaattcaat
1921 aaccgcatac tttccggcga aatattgaca tcacccgtgg gatttttcac ccgcggtaaa
1981 cgttccaacg cctgcatcac cgcttgccga accgcgccga tttggccgcc cgcgcgttgc
2041 gcaatcgcaa taatgctgct gccttcttga tcgagtagtg ccgaaaaaat atgcagcggc
2101 tcaatatatg cgtgatcttt gcccacggcg agcgattgcg ccgccgataa agcttcttga
2161 aaacgcgctg taaatttttt actcatttgc atgaactcca ttgaattatt gattgcttta
2221 atgagggcat tattattttt ttcaaataaa aatatgaatc gcaccagtag tttatgaata
2281 aatgatgacg cgggattcat tttttatatt actcatcaat ttcttttaaa aaaggaaatc
2341 aatatcaata aattgtttaa aaacaaataa ttaaaaatgg taatttttta gtgtttggta
2401 tctcgaattc ttgcgataac attaaacctc ttcattataa a
//GenBank-Updates@genbank.bio.net (04/25/91)
LOCUS BNOCLPBA 2441 bp ds-DNA BCT 25-APR-1991
DEFINITION B.nodosus clpB gene encoding a regulatory subunit of ATP-dependent
protease.
ACCESSION M32229
KEYWORDS ATP-dependent protease.
SOURCE B.nodosus serotype A1 DNA, clones pBA12[1,6].
ORGANISM Bacteroides nodosus
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Anaerobic gram-negative straight, curved and helical rods;
Bacteroidaceae.
REFERENCE 1 (bases 1 to 2441)
AUTHORS Hobbs,M., Dalrymple,B.P. and Mattick,J.S.
JOURNAL Unpublished (1990) Univ. Queensland, St. Lucia, Queensland 4067
Australia
STANDARD full staff_review
REFERENCE 2 (sites)
AUTHORS Gottesman,S., Squires,C., Pichersky,E., Carrington,M., Hobbs,M.,
Mattick,J.S., Dalrymple,B., Kuramitsu,H., Shiroza,T., Foster,T.,
Clark,W.P., Ross,B., Squires,C.L. and Maurizi,M.R.
TITLE Conservation of the regulatory subunit for the Clp ATP-dependent
protease in prokaryotes and eukaryotes
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 85, 3513-3517 (1990)
STANDARD full staff_review
REFERENCE 3 (sites)
AUTHORS Hobbs,M., Dalrymple,B.P., Cox,P.T., Livingston,S.P., Delaney,S.F.
and Mattick,J.S.
TITLE Organization of the fimbrial gene region of Bacteroides nodosus:
Class I and class II strains
JOURNAL Mol. Microbiol. (1991) In press
STANDARD full staff_review
REFERENCE 4 (sites)
AUTHORS Mattick,J.S., Anderson,B.J., Cox,P.T., Dalrymple,B.P., Bills,M.M.,
Hobbs,M. and Egerton,J.R.
TITLE Gene sequences and comparison of the fimbrial subunits
representative of Bacteroides nodosus serogroups A to I: Class I
and class II strains
JOURNAL Mol. Microbiol. (1991) In press
STANDARD full staff_review
COMMENT Draft entry and computer-readable sequence kindly submitted
by M. Hobbs, 20-FEB-1990.
FEATURES Location/Qualifiers
CDS complement(<1..2192)
/note="regulatory subunit"
/product="ATP-dependent protease"
/gene="clpB"
/codon_start=2192
BASE COUNT 632 a 656 c 436 g 717 t
ORIGIN
1 gccagcaatt gaatcatatc ggagcccaaa ttggaggtca taataatcac cgtgtgacga
61 aaatcgaccg ttctaccttg cccatcagtc aaacgacctt catctaaaac ctgcaataac
121 gtattaaaaa catcgctatg cgctttttcc acctcatcaa ataacaccac gctatacggt
181 ttgcgccgca cggcttccgt taaataaccg ccttgatcgt agccaacata acccggcggc
241 gccccaatta aacgtgcaac actatgtttt tccatgaatt cgctcatatc gatgcgcacc
301 atattttctt cactatcaaa caaaaattgc gccaaagtac ggcataattc agttttacca
361 acacccgtcg ggcccaaaaa taaaaaagaa ccaattggac gttttgggtc agataatccc
421 gcgcgattgc gccgaatcgc gttggcaacc gcttcaactg ccgttttttg tcctaccacg
481 cgttcattta ataccgtttc caaatgcaat aaacgctctt tttcgccttc catcattttg
541 gcaaccggaa tccccgtcca acgggaaacg atttccgcga tttcttcagc ggtcacttta
601 ttacgcatta aacgatgcgg acgttgttcc gtttgttgtt cattttcaag caattgcttt
661 tcttttgccg gaatcaaacc atattgaatt tcgctcgcgc gcgcaaaatc gccgcgccgt
721 tttgccgctt ccaattccac gcgtaattta tctaattgct ccttaatttc ggcggcgcct
781 gcgtttcccg ctttttctgc caaccaaatc tcttctaaat cggcatattc tttttcttgc
841 gcggcaattt ctgcttctaa atcgctcaaa cgtcttttcg acgccgcatc ggtttctttt
901 tccagcgcca ttcgctcgat ttgcaattga atcaaccgcc gatcaatttt atccatcact
961 tccggtttac tatccaattc catgcgaatt tgcgctgcgg cttcgtccat caaatcgata
1021 gctttatcgg gcaattttcg tccgctgata taacgatgcg acaactgcgc cgctgccacc
1081 aacgccggat ccgtaatatt aatgccgtga tgcacttcat aacgttcctg caaattgcgc
1141 aaaatcgcaa tcgtatcttc aacgctgggt tcatcaacga tcaccttttg aaaacgccgt
1201 tccagcgccg catctttttc catatattga cgatattcgt ccaaagtcgt tgcaccaatg
1261 caatgcaaat cgccgcgcgc aagcgctggt ttgagcatat tgccggcatc taaagaacct
1321 tcacttttgc ccgcgccaac catggtatga atttcatcga taaataaaat aatttgccca
1381 tcggctttcg tgatttcatc taaaacggct tttagccgtt cttcaaattc accgcggtat
1441 ttcgtgccgg ctaataacgc cgctaaatct aaagataaca aacgtttacc ttttaaactt
1501 tccggcacag cgcgatccgc gattctttgc gccaaacctt ccacaattgc cgttttaccg
1561 acgcccggct cgccaatcaa tacgggatta tttttactac gacgttgaag aatttgcatc
1621 gcgcggcgaa tttcctcatc gcgaccaatg acgggatcga ttttgccatc taacggccgc
1681 tgcgtaacgt ctaaggtata ttttttcaat gcaccgcgtt tatcttcagc gtattcatct
1741 gtcaccgcct cgccgccgcg caccgcatca attgctgcca ccaccgccgc tttttccaaa
1801 ccgttggcac gcaacaattg ctccaaatcc ccttttgcat cataaaccgc gcgcaaaaag
1861 agctcggaag aaatatattc atcgccattt tgttgcgcgt atttatcgca taaattcaat
1921 aaccgcatac tttccggcga aatattgaca tcacccgtgg gatttttcac ccgcggtaaa
1981 cgttccaacg cctgcatcac cgcttgccga accgcgccga tttggccgcc cgcgcgttgc
2041 gcaatcgcaa taatgctgct gccttcttga tcgagtagtg ccgaaaaaat atgcagcggc
2101 tcaatatatg cgtgatcttt gcccacggcg agcgattgcg ccgccgataa agcttcttga
2161 aaacgcgctg taaatttttt actcatttgc atgaactcca ttgaattatt gattgcttta
2221 atgagggcat tattattttt ttcaaataaa aatatgaatc gcaccagtag tttatgaata
2281 aatgatgacg cgggattcat tttttatatt actcatcaat ttcttttaaa aaaggaaatc
2341 aatatcaata aattgtttaa aaacaaataa ttaaaaatgg taatttttta gtgtttggta
2401 tctcgaattc ttgcgataac attaaacctc ttcattataa a
//GenBank-Updates@genbank.bio.net (05/03/91)
LOCUS DIHCLPBA 2441 bp ds-DNA BCT 03-MAY-1991
DEFINITION B.nodosus clpB gene encoding a regulatory subunit of ATP-dependent
protease.
ACCESSION M32229
KEYWORDS ATP-dependent protease.
SOURCE B.nodosus serotype A1 DNA, clones pBA12[1,6].
ORGANISM Dichelobacter nodosus
Prokaryota; Bacteria; Gracilicutes; Scotobacteria;
Anaerobic gram-negative straight, curved and helical rods;
Cardiobacteriaceae.
REFERENCE 1 (bases 1 to 2441)
AUTHORS Hobbs,M., Dalrymple,B.P. and Mattick,J.S.
JOURNAL Unpublished (1990) Univ. Queensland, St. Lucia, Queensland 4067
Australia
STANDARD full staff_review
REFERENCE 2 (sites)
AUTHORS Gottesman,S., Squires,C., Pichersky,E., Carrington,M., Hobbs,M.,
Mattick,J.S., Dalrymple,B., Kuramitsu,H., Shiroza,T., Foster,T.,
Clark,W.P., Ross,B., Squires,C.L. and Maurizi,M.R.
TITLE Conservation of the regulatory subunit for the Clp ATP-dependent
protease in prokaryotes and eukaryotes
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 85, 3513-3517 (1990)
STANDARD full staff_review
REFERENCE 3 (sites)
AUTHORS Hobbs,M., Dalrymple,B.P., Cox,P.T., Livingston,S.P., Delaney,S.F.
and Mattick,J.S.
TITLE Organization of the fimbrial gene region of Bacteroides nodosus:
Class I and class II strains
JOURNAL Mol. Microbiol. 5, 543-560 (1991)
STANDARD full staff_review
REFERENCE 4 (sites)
AUTHORS Mattick,J.S., Anderson,B.J., Cox,P.T., Dalrymple,B.P., Bills,M.M.,
Hobbs,M. and Egerton,J.R.
TITLE Gene sequences and comparison of the fimbrial subunits
representative of Bacteroides nodosus serogroups A to I: Class I
and class II strains
JOURNAL Mol. Microbiol. 5, 561-573 (1991)
STANDARD full staff_review
COMMENT Draft entry and computer-readable sequence kindly submitted
by M. Hobbs, 20-FEB-1990.
FEATURES Location/Qualifiers
CDS complement(<1..2192)
/note="regulatory subunit"
/product="ATP-dependent protease"
/gene="clpB"
/codon_start=2192
BASE COUNT 632 a 656 c 436 g 717 t
ORIGIN
1 gccagcaatt gaatcatatc ggagcccaaa ttggaggtca taataatcac cgtgtgacga
61 aaatcgaccg ttctaccttg cccatcagtc aaacgacctt catctaaaac ctgcaataac
121 gtattaaaaa catcgctatg cgctttttcc acctcatcaa ataacaccac gctatacggt
181 ttgcgccgca cggcttccgt taaataaccg ccttgatcgt agccaacata acccggcggc
241 gccccaatta aacgtgcaac actatgtttt tccatgaatt cgctcatatc gatgcgcacc
301 atattttctt cactatcaaa caaaaattgc gccaaagtac ggcataattc agttttacca
361 acacccgtcg ggcccaaaaa taaaaaagaa ccaattggac gttttgggtc agataatccc
421 gcgcgattgc gccgaatcgc gttggcaacc gcttcaactg ccgttttttg tcctaccacg
481 cgttcattta ataccgtttc caaatgcaat aaacgctctt tttcgccttc catcattttg
541 gcaaccggaa tccccgtcca acgggaaacg atttccgcga tttcttcagc ggtcacttta
601 ttacgcatta aacgatgcgg acgttgttcc gtttgttgtt cattttcaag caattgcttt
661 tcttttgccg gaatcaaacc atattgaatt tcgctcgcgc gcgcaaaatc gccgcgccgt
721 tttgccgctt ccaattccac gcgtaattta tctaattgct ccttaatttc ggcggcgcct
781 gcgtttcccg ctttttctgc caaccaaatc tcttctaaat cggcatattc tttttcttgc
841 gcggcaattt ctgcttctaa atcgctcaaa cgtcttttcg acgccgcatc ggtttctttt
901 tccagcgcca ttcgctcgat ttgcaattga atcaaccgcc gatcaatttt atccatcact
961 tccggtttac tatccaattc catgcgaatt tgcgctgcgg cttcgtccat caaatcgata
1021 gctttatcgg gcaattttcg tccgctgata taacgatgcg acaactgcgc cgctgccacc
1081 aacgccggat ccgtaatatt aatgccgtga tgcacttcat aacgttcctg caaattgcgc
1141 aaaatcgcaa tcgtatcttc aacgctgggt tcatcaacga tcaccttttg aaaacgccgt
1201 tccagcgccg catctttttc catatattga cgatattcgt ccaaagtcgt tgcaccaatg
1261 caatgcaaat cgccgcgcgc aagcgctggt ttgagcatat tgccggcatc taaagaacct
1321 tcacttttgc ccgcgccaac catggtatga atttcatcga taaataaaat aatttgccca
1381 tcggctttcg tgatttcatc taaaacggct tttagccgtt cttcaaattc accgcggtat
1441 ttcgtgccgg ctaataacgc cgctaaatct aaagataaca aacgtttacc ttttaaactt
1501 tccggcacag cgcgatccgc gattctttgc gccaaacctt ccacaattgc cgttttaccg
1561 acgcccggct cgccaatcaa tacgggatta tttttactac gacgttgaag aatttgcatc
1621 gcgcggcgaa tttcctcatc gcgaccaatg acgggatcga ttttgccatc taacggccgc
1681 tgcgtaacgt ctaaggtata ttttttcaat gcaccgcgtt tatcttcagc gtattcatct
1741 gtcaccgcct cgccgccgcg caccgcatca attgctgcca ccaccgccgc tttttccaaa
1801 ccgttggcac gcaacaattg ctccaaatcc ccttttgcat cataaaccgc gcgcaaaaag
1861 agctcggaag aaatatattc atcgccattt tgttgcgcgt atttatcgca taaattcaat
1921 aaccgcatac tttccggcga aatattgaca tcacccgtgg gatttttcac ccgcggtaaa
1981 cgttccaacg cctgcatcac cgcttgccga accgcgccga tttggccgcc cgcgcgttgc
2041 gcaatcgcaa taatgctgct gccttcttga tcgagtagtg ccgaaaaaat atgcagcggc
2101 tcaatatatg cgtgatcttt gcccacggcg agcgattgcg ccgccgataa agcttcttga
2161 aaacgcgctg taaatttttt actcatttgc atgaactcca ttgaattatt gattgcttta
2221 atgagggcat tattattttt ttcaaataaa aatatgaatc gcaccagtag tttatgaata
2281 aatgatgacg cgggattcat tttttatatt actcatcaat ttcttttaaa aaaggaaatc
2341 aatatcaata aattgtttaa aaacaaataa ttaaaaatgg taatttttta gtgtttggta
2401 tctcgaattc ttgcgataac attaaacctc ttcattataa a
//