GenBank-Updates@genbank.bio.net (03/08/91)
LOCUS HVALDSRNA 12734 bp ds-RNA VRL 08-MAR-1991
DEFINITION Cryphonectria parasitica hypovirulence-associated virus genomic
RNA.
ACCESSION M57938
KEYWORDS .
SOURCE Hypovirulence-associated virus genomic dsRNA from host
Cryphonectria parasitica strain EP713.
ORGANISM Hypovirulence-associated virus
Viridae; Fungal viruses; ds-RNA viruses.
REFERENCE 1 (bases 1 to 12734)
AUTHORS Shapira,R., Choi,G.H. and Nuss,D.L.
TITLE A genetic element associated with biological control of chestnut
blight resembles a viral genomic RNA in genetic organization and
expression strategy
JOURNAL Unpublished (1990)
STANDARD simple staff_review
FEATURES Location/Qualifiers
prim_transcript 1..12712
CDS 496..2364
/label=ORF A
/codon_start=496
CDS 2364..11861
/label=ORF B
/codon_start=2364
BASE COUNT 3127 a 3280 c 3381 g 2946 t
ORIGIN
1 gcctatgggt ggtctacata ggtgagcatg cgttgctcga tatagaccgc cattattggt
61 aacacgcttg aagtgttctc atccggagaa agtgatttgc tttcttccat gaggctccct
121 ggagggattg tccaataatg gttgataatt ttggttgctg cacaaccggg gctttgcccg
181 gggatttcat cccgttcaag gtgaggccct tgtagtaacc tctccccgct gcgtgagcga
241 atacataagt tcacccagta ctgacagtgt cagcgccgca cgtgcgtgaa acgtgtgact
301 cgcagactga agcgacctat ggtgaaaacg gatgtaccat ctagctgtgg agtagtgacc
361 ctagaagcta atccgatggt tccaccagtc gttgtttgcc ggcaaacgcc acaaacggtt
421 tcgtgctttg cgtgaagaag cacggtctct taagagttca ttggtacggt tgaccccgaa
481 cgaggtccga acataatggc tcaattaaga aaacccagtc agagtctggt gctctctgaa
541 agtgttgatc ctactacagt ggatcctttc gtcagcgtga ggacggaaga ggtggtccct
601 gcgggttgca taaccctatg ggagtacaga gactcatgtg gcgacgtgcc tggcccgttg
661 tcgcatggtg atctccggcg tttgcgcacc cctgacgggg tatgtaagtg ccaggtccac
721 tttgagttgc cgaccgtgct caagagtggt tccaccggaa cggtcccgga acaccccgcg
781 gtgttggctg ccttcattgg caggcctcgc cggtgttcct tggaacaacg tacgaaggag
841 ttggattccc gattccttca gttggtgcat ggtggcctcc ctgcgaggcc atcatacatg
901 attgcgcgcc cgcccaggcc agttcgaggc ctgtgctcat ctcggaacgg ttcccttgct
961 cagtttgggc agggctactg ttatctctcg gccattgtag acagcgcaag atggcgcgtc
1021 gcccgtacca ccggttggtg tgtacgtgtg gcagactatc ttaggctgct acaatgggtt
1081 ggtcgccggt cctttggctc ctttcagatt gagaaaagcg ccgtcgacca tgtttatcac
1141 gtggtcgtcg acgctgagta tcagtctgag caggatgggg cccttttcta ccaagccatt
1201 ttgggtttgg ccgagaagga tccccttgcc cggattggcg gccgattgaa cccgctcgct
1261 gccgagtttg cgcccggcag cgcccttagg gttgaacctg tgactccaca ggttacccgc
1321 cgtaaaggtt cgactcggat gactggtcgt gacccaacca ttgtctccgt tggcaaggtt
1381 ggtatggcca tcaccagcat ccaggatgct cttgtggcta cggagttgag gaacgtcaat
1441 ttcggccgtc gtgacacgga agctgagtgt cgtcgccttt gggcgagata cgaagtgaac
1501 gactatttcc gtcgtcacaa ggccgaactc ctcaagttcg atgcgcgcct tcggtcgcgc
1561 atggccaaga aacctgcgtc gtcacgggcc cgcccgtccg acgcaaagat tcagtgcata
1621 gggtggcgtg atcgccacct gttgccacaa cgccttgctg gtctctccaa acaaggccgt
1681 tccctcgtct ggtcgcggtt cgcgaccagc aacatcagac gcaagactcc gccttgtgtc
1741 gtcaacccca gtgcggaccc cgtcgtccat aactggaagg attccgctgc cctggcagtg
1801 aagaaaatcg ccgaagcacg ccggcgacaa gaaattcgcg ctgcagccta cgccgagcgg
1861 gccaaagctc gggggcagac caatgtcgtt gcttccattt cggaagcaat tgaaaccact
1921 ctacggcgga ataaaacccg ctttgccttg gatggtcttc atctggcggc atctgccatt
1981 gtcacgaccc ggttgaggtc gtggaaccaa gaggaaattc gtgctggtcg cgaatttcgt
2041 aaatcaacca cttcctggat atggaggcat gtgccttcat caatccagga cgccctgaac
2101 ctgacttcgg tcagggacaa gctcgacccc ggccgcgcgt ttggttacgt gcaggctgcg
2161 gttgcgcagg gcatgtccga cttccggagg gcaaagcggg cattggcgat cgtcgccaag
2221 cccgtaatcc ggaacatccg tgacccctat gagcacgggt ttgtcaagcg agatggtaag
2281 cttcgccatt ctcgcgacgc atttaataag aagctgcgta caaaggccgt ggccgccacg
2341 aaggtccaca aaataaaatt ttaatgtata aggaagccga acgacctatt gaagtgtggc
2401 gaacacaggt catggacggg ccaacatgga ctgccctttc tgagtcgtgc agggacaggt
2461 tgttctttgc atccggggaa ggtggtgagc acatgacgct cgatatcatc cagcctgatt
2521 cgtacaccaa gatacgctta tttcgcagcg gtcggttcga ggtgtcggtt gacggaaaga
2581 gttttggcca gggcggcaac cgttatagat tcgtctttcg ctatgactct ttgctgtcga
2641 caccttttgg atatcctgcc gaggacaagg aaatagcgct tcaggattac aatcacaagc
2701 agttgctggg tgagatgttc ttgaagcttc ctgactccta tgttgacggg agaccgatcg
2761 ctgaggcttt ctttcgttac gttgacgacc tgaaatggga tgtcggcgtg ttccgtgacc
2821 gcaggtcgct aacggaactt catttaccag catcatctgg tttaacaact gcacaagttt
2881 cggtggccaa actcgaatgg ccgccactac ctatcatcca ggcccagccg acaatactag
2941 ccggtatcat tgacaacttc aagatttgct tccccgtaaa cgggaaatgg atctatggtc
3001 aagggttgtc atggaccaga tacgatggcg atgcctccgt tccaacctct ctattgtcca
3061 accgacagca cgcgaggttc tggaacgaga aggacatccc caccggcctg aagctttcaa
3121 aggaaggctt catcaagctc tgggcccaga aatctcgcaa gtggcaggac cacatggcga
3181 gatcgatagg attaagtcac gaggccgctg tagagttggt tcgtgcaaca agagtgaacg
3241 aagcaaagcc ccatctcgtc cccatggaag aggcgaaaga ggcacctagg cagcagcttg
3301 ttcctaggcg ttcaactttc gtcgataacc atgaggagga ggttgagatt gacacccttc
3361 gggtgccggt cgaagagggt cgatgtttcg agctcttgtt caataatcaa gtaacccctg
3421 caattttcga caagaagcca ttgcttaaag acgtcctcgg cgtgttcgaa gagaatgtct
3481 gcacgatgga ctcgctcgaa atcagtcaca gtgaccaatg cgtgcacatt gtcgctggtg
3541 aaaccttccg gaactacgat gaaatcaaag ccgttctcga ggtcattctt gagaacgagc
3601 ctgacatcct cgttggagct gaagaaggtt cagtcgctga ttatgtgaaa gcgggcaaac
3661 acttcttgtt tgaaaaccac cagtgggtca gaaatgggct caagctagcg aagggtctag
3721 ctgaacctgg ccaaagggcc aaagataata ccaacccttc gacacctagg ccgattgaag
3781 acgctgacta cattcatcct tttgacaacg gacagcccct cccgggcagg tccgaccaat
3841 gggtcagcgg ctttgaagtg acgaggttac gtcaccatga cgaaatgcca cacattagga
3901 gtgtgaggaa cacgggcatc catgggctac ctggggattt cttgtcgaat taccctagac
3961 tgcctacgcc tgtatttcat cgcctccgcg atttgtggga tgatgtcatc ggcatactga
4021 tgaagcttga attcggggac aattgttcac cggtgctcaa cgtgactgct aatgcagact
4081 gggttcggtc agagacgacg ataaatttta tctctgacca acccggcaag gctcagtcac
4141 gtcctcgcga agatgggggt tttgacatcc tcgttccttg caggggcatc gcaacccgaa
4201 gcatcaggct tctgcctcta ttcatcagac tgccaaaccg tttcagggcc gtggctttgt
4261 taaacggtag gcagtctgat tatgacaatt atggttggcc agtgttcaat ccggtcatcc
4321 cattgcctca gatggactcc ttctacgtgg aggccgtcgc cgctggcaga tcaatgtacc
4381 cacctggttt cctcctaggt aggtatgacg cactagagta tctagtgcac actgcgacgg
4441 tgtatggcgc tgaggaagcc ttcttgcttc cgttcacgca tcatgtgaga gtgtatcccc
4501 ctccccgtcc agggagggag attcctttcg gctcgtggtg caagaactac aagttcgaag
4561 cagaaaggtt ttggtatgac gcggactgga aactgagggt ccacgaaacc aaccacgatt
4621 ttgacaggtt aatcgaaata acaaaaacct gtcgccgcaa cccccccgaa gaaaacttgc
4681 aagcaaaact ggaggacacc gcgcgcaagg tgtgtagtgt atggcaatat aacatcatga
4741 tcgcttcatc tgtcgcgttt ctagtgccat tatacttcac actctatgtg ccgtacctgc
4801 aattctactt gcatgttgac ccaggcgatt acatattgct tccaccggtg ctctggttgg
4861 tctggaccaa tctttgctac ggctacgcgt gtgacgcctg gtgccgttta tttttcttcg
4921 tagaggaggc gggaaagaaa gaacttgtcc attcaagtga ggagttttcc agtgacccgt
4981 catccacgct cttgatcccg acaatgggaa caagaggaga tcacgtgcca ccacggttct
5041 tcgccaacat ggcggtcctc gcaggtgtca agacccatct cttgaaactg cagactgcga
5101 cgtacggcga tttggagaac ctcaagaaag ggaagctcgg aagcttgttg ccaggctatc
5161 ttcagaacca ttactcggtg ctgaggggtt acaaagccgc gttcactccg catgtcgagc
5221 ttgacatgcc gaacgcaact tcgtacaact tagcaccgcc tcgcagctac atcaacaaga
5281 tacggtacct gaccgatgaa aatcggtcgg gcgccagtat gattgatcgc gctgtgacct
5341 ggttcgccga agaactggca gacacgttct ggcccgactg gcaaattggt tgccttagag
5401 gttgcaattt accgcgttcc gcggatggtg tttccctgat caccaaacaa cccaacctta
5461 aaacagggaa aatcggatgg ctacatggct ccgctgatcc agctgtggtg cctaaggaca
5521 tcagggacaa gtaccccctg gttccgaacg gtgaccacaa cgagatcttc aggcattatg
5581 ataagattta catgcctggt ggagccggtg ccgtccaaac cgcaatcgct tgtggatgcg
5641 aagtcgtcgt cacagacgtc aaccttgaca gagattatca cacaatgcct acgcagaaag
5701 actttcacca accctccata ctgccatact tcgcatggct gtggaggcaa gggtttgatg
5761 ttaaactgcc acgcgtgttg ctcgtcatag gctggctgaa gtttcattac tccatccgct
5821 acaagcatct ggaattcgcc gctgacttcg tcatcagggc tgggttgttc tggtggtatg
5881 ggtgcttgca cctactacca ttcatggcag ccgcgatcat ggcaccaagg ttcgttaaga
5941 agtacttggt tggcatggcg tggttaactg aacccggtct cctaatgctg aaggcgctgt
6001 ggcgttttcc aattttcatg gtcaccccaa ggtggatgct gccgttcatt gtaacggttt
6061 cggtatacaa ttggtggtgg ccgttatccc aagacgggct caactacgcg agcaaacggt
6121 ttgaattgat cttcgaaccg gtaactcggg gtaagcacac gttttcctac ccattcgggc
6181 actggtgttt gcgtgacacc aactcgatga ttgtttacga aggaaaattt gtcaacccaa
6241 gtgagacctc aatcgggtct cccttcaagt tgtcgaagtc cgttagaccg gtccgacctg
6301 gcgcagtgtt ccacctggtg cctttccacg tccagaagct tctggattca atggatgagg
6361 caccactacc ttacagcgcg aatcacaatt gcacgaccgt gatcctcaag gggatcatgt
6421 accgtagtgc actaggtttt gtattcgcgt atatggtttc gtgggcggtg tacctggtcc
6481 tccggcctcc tcaagccgcg gctaccgttt atcactgggt gtatcccgag cgatcgtggg
6541 acacatcaag gctgtatcat ctgctgctgg gtttcgcagc aggtggcacg gtgccaatgg
6601 aagtgataga cgaagagcac gttgaggaaa agccttcggt tgctggtcag tcagagccag
6661 ccgccgaaat cgacaatgac aaaatttctg actatgacca agaatggtgg gggagtcaag
6721 acagtattga cacagtggtt aacgacctgt gttacttgct gtccttcctg aaagatacgg
6781 cgatccctga agaggtcaaa ctcgatgtag tcgaactggc ttacacccag cttgtccagg
6841 acgaaaagga acgcatacca gaaccgaagg gaactaagat tctggacatg ccgaattgga
6901 agcctggcaa ctgggccaag ttaatagacg agacgcatcg ggtgctctcc cagtttactc
6961 aatatacacc gcgagttctc aacgaactcg tcgtgtggtt gaaaggacta ggggagaacc
7021 tctatagggt cgctgaaccc attcttatgc tattagtacg tgcgatgaga gctgccaaat
7081 ccgtgagtga tcgtgccaca cgttccgtat atcactgcct ctgccattgg ctagacgtga
7141 tgtatggcgg ctccgcccct accagggtga agaccgtgtg gggactcaca ggcctggtgg
7201 cttctggcat gaccagtcag aaagccatac tcgctcagaa catagcaatg atggaatacc
7261 agggcagagg gaatttcctt gatgattatg acaactttgt ctccaacatc aaggaacccg
7321 ggaaaggact acctggtata aacaccatcg gagggccaca acgacgtccg attcgataca
7381 agaaccctgt catgtctcac caggctgccg aaatctgtgg attgaagcct ggggagtatg
7441 aagtggatga taggtatcag gaaaggataa acgattacct tgcggaaggg atcccgcagg
7501 cagtcgatgg cgtcctcttt ggagacagga atcccgacag gatcgcgcga tccataagcc
7561 gatatgaacc cgaatactct ggctgttcgc ctgaggacaa ggccttggtg gaggataccg
7621 ccagggccat gttcgaacaa tggccagaag tgttcgccga tcgagacatc atgctcccta
7681 aaggtgtaga actttacatc aaagagaagt actcggcggg caccccgttc ataagctcgt
7741 tctataagag tagaaaggct cttaagcaag ctggtgtcat ggatgtgatc cgtaaaaacg
7801 cactggagtg catcagtacc ggtaaatacc ctacgcaatt ttaccacgcg ttcgcgaagt
7861 cacaagcggt tcctggccaa cctttgttgg ctccccgcat gaaggacttg cgaacggtgg
7921 tctccgagga tctatccgct tacatggtcg accagatctt tcagatcgag gccaacaagc
7981 gaataacctg ggaaacgtac ggtgccggtt ctggcatgcc tttgtcacaa tcgatggctc
8041 gcatttggga cgagctgcat gatttgagga aacgcgaagg agggcagttc atcattgctg
8101 atgcgactgc ctacgactca aactgtaaac cagcattgtt ccatggggct ggcaaactgg
8161 ttgagttagg tttccaaaat catccgagtg gcaaaggacg acaattcgca caagttgtcc
8221 agtgcaaatt cgaggccatg caaaatgcat gggtcatggg gataaccgaa ccttcctata
8281 ccgccttgac tttccacgtc cctgacgtgg cggtgaggca tgaactggaa tccaagtacc
8341 ctgcacactt tgcgacgttc agcgagcttc tggctcacaa taatgtgaac gtcactgagt
8401 ggaagaggtt atcttgggag gaacggaaag catgtgctcg tgacatgcag gccgttcctg
8461 gcaaggtttt ccttaccaat gatccagcat tgcgattgca aggctcgtca tggcaaggtt
8521 ctttcaccac cgaacccaaa agggacgaat tccggaaata ccaaacttat ttctatgatt
8581 cgaaggcggc aatgagagaa gatataaagc gtattgtctt cgccaatcgc gaagtcatat
8641 ccaacgtcca ccacaagaac cgtggtggag gcactggtca gagtgccact tcgtgggaca
8701 atacagctac attcaaactt ggcgtcatca gcgcctgggc acgcgctact ggtaaaccgc
8761 ccaaagattt cttttgttca aacaggctct acaatacgag cgatgacaca gtgtggtggt
8821 ctaaggacct gttatcctct gccgaggttg atcgcttcaa gcaagctgcc gccgattttg
8881 gcatcctgct tgagatcggg tcgaccaaga agataacaga agtggaatac ttatcgaagt
8941 tgccacgtcg cccaaccgca gaagattcag cggactatcg ggcatggagg cagggaagga
9001 tcgagaacat gcgatcctca ggccggttca gtgaagagca gcttctctcc attgaacgcg
9061 agcaactacc tcaattcctg atggtccaga accccacggc tattctaatg cgaaggactg
9121 ctttccgtta ttatcagagc agtccctcga agttcctgta cacctcgtgt gaacggggtg
9181 ccggtcacgc actcgtgacg gcattccagc ccgcactgta caagaggttc gcaattgagt
9241 acgccgagga cctgaatcgt ctctgcaagg agcaccacat caatcagcgc tacgagctcg
9301 tcagtcaaca agataggatg aagatgcagg ttataaacgt gaacccgaac tggaaacgga
9361 acttcaagtt gtcaccaaga caagaagcat tccttcggtg gatcaggcag gccaagtttc
9421 catcttatcg acaagttcta gacatacacc tcaggataag ggatcctgac ccatccgcgc
9481 atgatcgctt tatcgccaaa ctggatcgcg cttggcgcaa tccagatgag gggatccgtg
9541 atatagtgga cggggtgtat cgctacacgg acatgatacc tgaggagttt aaaaggttca
9601 tgccgtctac ggacatgctg tatgccgaga atccgtggca cactcacaac cagtatgtgg
9661 agaaattcat atacctcaag ttgctggaaa ccacgaccgt tgacgagctc acgttcgccc
9721 aatttgatgc cgtcgctaag gagtcccctt acggcatctg catgaatacg ataaagttct
9781 gggaagacct aagagaccct gactatctga aggatctctt ggcctccgag gccatgatag
9841 ataaggtgcg catctaccaa ggcatgactg tcatcatctc ggccatgtat ttcgcaatgc
9901 attgggtcga gctgtttatt cagtcactgt tcttgatagg gccattatat aatctattca
9961 tgtggtcgtt ctggggattg tcaaaagtct acggactggc gaacacgttt tattggcatg
10021 gtaaagcccg ctcgagcaga gaaatcagct cgatcctgcc aagagaccca tacatgtggt
10081 ctaaacgttt cgtcagcacg atggctgatt tcatccctga acgatttgct ctcggtatcg
10141 ttcccgtgac cttggtcttg gatggtctcg ccgagatcat cgaagttcta tttgggcgca
10201 tgtggagact gtttgcgaat ctgaaatcgg taggcaccga cttcagtgac gcacgatctg
10261 gcaaatcgtt aaatgtgccg tccaatcctt gggccgcgta cgcccacacg tacgcaacaa
10321 aagccatcga gcacggtcac gttactgtag ccgcaaaaac cgcttccggt aagtccactt
10381 tcttccccgc agcggtgtgg gcggagagga ggaacatcgg aatcaagaaa ctgtggatcg
10441 ttatgccaag gaagatcctc cgcgataact gggagattcc atttgacatc cgatctcaaa
10501 tcgtgaaacg gggcaaaaca ctagacccat cggccgatat ctacgtgacc acgtacggac
10561 atttccgaac gaggataggt ggactggtcc cgagggacaa cctggtgttc ttcgatgagt
10621 ttcacgaaat ggacggtttc atgctacagg acgtggaaga ctggaaagga ccaaccatct
10681 tcatgagtgc aactcctgtt gcacttcatg gaatggccgg catccctttt cttgagccaa
10741 cactgccaaa gcgtttcaat cttaccgttt acaaggttga ttccgatgac gtgttggaaa
10801 tgtggaaccg ggctcggaat cagtttgctg atcagcccga attgttggcc cgcccaatga
10861 tcatagtccc cacatataac gaactcaaga agacgattgc tggattggag aacttggaca
10921 ggtctatcac gtggcatgag gtgagcagta atagccccct cgtgcctaag actggtggcc
10981 tcgtgtgcac gccatatgta caaactggca tcgatatcaa acccgcgccg tcgatcttga
11041 tcgacagcgg ccgagatgtc attgtgcata agggtaggct agtcacaccc cacccctata
11101 cggacgagaa gaccaacgaa cagagggtca atcgtgtcgg taggacgatg gatggtgtgg
11161 tcatacagcc gcaactggct ggcacaggca accctcctgt caagtatcct agtgggattt
11221 tcttttcttc agagttagtc gcggggcagt acaaggtccc ccgattaact aaagtcaatg
11281 gttgtgtcca cccggaactg ccgtacatgt caatcaagta cacatccgag ctttcagacc
11341 ccgctaaagc aagggaggag gaacaaagcg tgacgaaatc gctcctgttt atccatctca
11401 tggcattggc gggcgtcagg cagtccgaat gggccttgcg ttacaatcga tactttgaac
11461 ttcaccttcc tttcggggaa gatgaagatc atttggagcg catcttaacg tcgggtaaac
11521 tgaggtatgc taaccacata ccagttgaca tggccatgca gttgctgggc aacgggcacg
11581 ttacatgggg catcggtggc gtccccacaa taacgcgacc aagatatcct tgtgatggga
11641 tgtgggtgga ggatccctcc tcccgtaagt catatgcgca caaggtactt ctacaccagc
11701 gggaacatgc agagatcggc atgtggcaag cgcaggtcaa cgagctcaga gcccagaacc
11761 ttgcccttca gtcacagctg agatcagcat gcacccgaag aagcacagca ggtcgcatct
11821 tacgacacac ccgtcctccg gatatacctg tttgcggtta acacaaaccg ccttccattt
11881 gtcatttcct ttgtcctttc cacgggagta gtgaccccgt gacacgccaa aaccagcacc
11941 tgaagtggat aactcaagcc tatgacatgg tcactgcccg tcagtaaaga cgttaacccg
12001 ggagctgatt ctgttaacag ccgcaccgcg aacggtacgt agattaaatc tacggttttc
12061 tgcctcctga gagattggca ggggaaaccc gctgaagagt ccaggaccga acacgaccac
12121 cattccggcg aatggttagg cctcgggaga tgcaattgtg cctcatcacc acacccacgt
12181 gaccaatgag accaactcgc aaaggagcag gaaacacagt gcaactgtcg gccagcaata
12241 gggctagaaa tactaaatac ctttaacttg gtggtaggcg tgtaccgaac gaccccggcc
12301 cagaagacca gggctgatgc ttgttaggca acggcaataa gaccgaagca agcacagaga
12361 ctggaaaagt aagccggatc cgtcgacgta ggatcgtcta catgttcaag aaatgggcga
12421 aaagggttgc ccgaaagtat gggctacgcg cttcgttgta aagctaccca tacaaaaccc
12481 ttcggcgcac tcacaactga aatgttagtg tttcaacatc tcaggagttt tagtgttacc
12541 gtcctgcgca agcaaagatg agaactatac ctttgacaac aaagggtata gggatcggaa
12601 aggccgctgc agtaggattc agacaaataa attttctctt gaaaatgtcc gccgttttct
12661 tttgttggct attccctttc accgtgcgta cggtgggaag agaacaacaa agaaaaaaaa
12721 aaaaaaaaaa aaaa
//GenBank-Updates@genbank.bio.net (04/12/91)
LOCUS HVALDSRNA 12734 bp ds-RNA VRL 12-APR-1991
DEFINITION Cryphonectria parasitica hypovirulence-associated virus genomic
RNA.
ACCESSION M57938
KEYWORDS .
SOURCE Hypovirulence-associated virus genomic dsRNA from host
Cryphonectria parasitica strain EP713.
ORGANISM Hypovirulence-associated virus
Viridae; Fungal viruses; ds-RNA viruses.
REFERENCE 1 (bases 1 to 12734)
AUTHORS Shapira,R., Choi,G.H. and Nuss,D.L.
TITLE Virus-like genetic organization and expression strategy for a
double-stranded RNA genetic element associated with biological
control of chestnutblight
JOURNAL Unpublished (1991)
STANDARD simple staff_review
FEATURES Location/Qualifiers
prim_transcript 1..12712
CDS 496..2364
/label=ORF A
/codon_start=496
CDS 2364..11861
/label=ORF B
/codon_start=2364
BASE COUNT 3127 a 3280 c 3381 g 2946 t
ORIGIN
1 gcctatgggt ggtctacata ggtgagcatg cgttgctcga tatagaccgc cattattggt
61 aacacgcttg aagtgttctc atccggagaa agtgatttgc tttcttccat gaggctccct
121 ggagggattg tccaataatg gttgataatt ttggttgctg cacaaccggg gctttgcccg
181 gggatttcat cccgttcaag gtgaggccct tgtagtaacc tctccccgct gcgtgagcga
241 atacataagt tcacccagta ctgacagtgt cagcgccgca cgtgcgtgaa acgtgtgact
301 cgcagactga agcgacctat ggtgaaaacg gatgtaccat ctagctgtgg agtagtgacc
361 ctagaagcta atccgatggt tccaccagtc gttgtttgcc ggcaaacgcc acaaacggtt
421 tcgtgctttg cgtgaagaag cacggtctct taagagttca ttggtacggt tgaccccgaa
481 cgaggtccga acataatggc tcaattaaga aaacccagtc agagtctggt gctctctgaa
541 agtgttgatc ctactacagt ggatcctttc gtcagcgtga ggacggaaga ggtggtccct
601 gcgggttgca taaccctatg ggagtacaga gactcatgtg gcgacgtgcc tggcccgttg
661 tcgcatggtg atctccggcg tttgcgcacc cctgacgggg tatgtaagtg ccaggtccac
721 tttgagttgc cgaccgtgct caagagtggt tccaccggaa cggtcccgga acaccccgcg
781 gtgttggctg ccttcattgg caggcctcgc cggtgttcct tggaacaacg tacgaaggag
841 ttggattccc gattccttca gttggtgcat ggtggcctcc ctgcgaggcc atcatacatg
901 attgcgcgcc cgcccaggcc agttcgaggc ctgtgctcat ctcggaacgg ttcccttgct
961 cagtttgggc agggctactg ttatctctcg gccattgtag acagcgcaag atggcgcgtc
1021 gcccgtacca ccggttggtg tgtacgtgtg gcagactatc ttaggctgct acaatgggtt
1081 ggtcgccggt cctttggctc ctttcagatt gagaaaagcg ccgtcgacca tgtttatcac
1141 gtggtcgtcg acgctgagta tcagtctgag caggatgggg cccttttcta ccaagccatt
1201 ttgggtttgg ccgagaagga tccccttgcc cggattggcg gccgattgaa cccgctcgct
1261 gccgagtttg cgcccggcag cgcccttagg gttgaacctg tgactccaca ggttacccgc
1321 cgtaaaggtt cgactcggat gactggtcgt gacccaacca ttgtctccgt tggcaaggtt
1381 ggtatggcca tcaccagcat ccaggatgct cttgtggcta cggagttgag gaacgtcaat
1441 ttcggccgtc gtgacacgga agctgagtgt cgtcgccttt gggcgagata cgaagtgaac
1501 gactatttcc gtcgtcacaa ggccgaactc ctcaagttcg atgcgcgcct tcggtcgcgc
1561 atggccaaga aacctgcgtc gtcacgggcc cgcccgtccg acgcaaagat tcagtgcata
1621 gggtggcgtg atcgccacct gttgccacaa cgccttgctg gtctctccaa acaaggccgt
1681 tccctcgtct ggtcgcggtt cgcgaccagc aacatcagac gcaagactcc gccttgtgtc
1741 gtcaacccca gtgcggaccc cgtcgtccat aactggaagg attccgctgc cctggcagtg
1801 aagaaaatcg ccgaagcacg ccggcgacaa gaaattcgcg ctgcagccta cgccgagcgg
1861 gccaaagctc gggggcagac caatgtcgtt gcttccattt cggaagcaat tgaaaccact
1921 ctacggcgga ataaaacccg ctttgccttg gatggtcttc atctggcggc atctgccatt
1981 gtcacgaccc ggttgaggtc gtggaaccaa gaggaaattc gtgctggtcg cgaatttcgt
2041 aaatcaacca cttcctggat atggaggcat gtgccttcat caatccagga cgccctgaac
2101 ctgacttcgg tcagggacaa gctcgacccc ggccgcgcgt ttggttacgt gcaggctgcg
2161 gttgcgcagg gcatgtccga cttccggagg gcaaagcggg cattggcgat cgtcgccaag
2221 cccgtaatcc ggaacatccg tgacccctat gagcacgggt ttgtcaagcg agatggtaag
2281 cttcgccatt ctcgcgacgc atttaataag aagctgcgta caaaggccgt ggccgccacg
2341 aaggtccaca aaataaaatt ttaatgtata aggaagccga acgacctatt gaagtgtggc
2401 gaacacaggt catggacggg ccaacatgga ctgccctttc tgagtcgtgc agggacaggt
2461 tgttctttgc atccggggaa ggtggtgagc acatgacgct cgatatcatc cagcctgatt
2521 cgtacaccaa gatacgctta tttcgcagcg gtcggttcga ggtgtcggtt gacggaaaga
2581 gttttggcca gggcggcaac cgttatagat tcgtctttcg ctatgactct ttgctgtcga
2641 caccttttgg atatcctgcc gaggacaagg aaatagcgct tcaggattac aatcacaagc
2701 agttgctggg tgagatgttc ttgaagcttc ctgactccta tgttgacggg agaccgatcg
2761 ctgaggcttt ctttcgttac gttgacgacc tgaaatggga tgtcggcgtg ttccgtgacc
2821 gcaggtcgct aacggaactt catttaccag catcatctgg tttaacaact gcacaagttt
2881 cggtggccaa actcgaatgg ccgccactac ctatcatcca ggcccagccg acaatactag
2941 ccggtatcat tgacaacttc aagatttgct tccccgtaaa cgggaaatgg atctatggtc
3001 aagggttgtc atggaccaga tacgatggcg atgcctccgt tccaacctct ctattgtcca
3061 accgacagca cgcgaggttc tggaacgaga aggacatccc caccggcctg aagctttcaa
3121 aggaaggctt catcaagctc tgggcccaga aatctcgcaa gtggcaggac cacatggcga
3181 gatcgatagg attaagtcac gaggccgctg tagagttggt tcgtgcaaca agagtgaacg
3241 aagcaaagcc ccatctcgtc cccatggaag aggcgaaaga ggcacctagg cagcagcttg
3301 ttcctaggcg ttcaactttc gtcgataacc atgaggagga ggttgagatt gacacccttc
3361 gggtgccggt cgaagagggt cgatgtttcg agctcttgtt caataatcaa gtaacccctg
3421 caattttcga caagaagcca ttgcttaaag acgtcctcgg cgtgttcgaa gagaatgtct
3481 gcacgatgga ctcgctcgaa atcagtcaca gtgaccaatg cgtgcacatt gtcgctggtg
3541 aaaccttccg gaactacgat gaaatcaaag ccgttctcga ggtcattctt gagaacgagc
3601 ctgacatcct cgttggagct gaagaaggtt cagtcgctga ttatgtgaaa gcgggcaaac
3661 acttcttgtt tgaaaaccac cagtgggtca gaaatgggct caagctagcg aagggtctag
3721 ctgaacctgg ccaaagggcc aaagataata ccaacccttc gacacctagg ccgattgaag
3781 acgctgacta cattcatcct tttgacaacg gacagcccct cccgggcagg tccgaccaat
3841 gggtcagcgg ctttgaagtg acgaggttac gtcaccatga cgaaatgcca cacattagga
3901 gtgtgaggaa cacgggcatc catgggctac ctggggattt cttgtcgaat taccctagac
3961 tgcctacgcc tgtatttcat cgcctccgcg atttgtggga tgatgtcatc ggcatactga
4021 tgaagcttga attcggggac aattgttcac cggtgctcaa cgtgactgct aatgcagact
4081 gggttcggtc agagacgacg ataaatttta tctctgacca acccggcaag gctcagtcac
4141 gtcctcgcga agatgggggt tttgacatcc tcgttccttg caggggcatc gcaacccgaa
4201 gcatcaggct tctgcctcta ttcatcagac tgccaaaccg tttcagggcc gtggctttgt
4261 taaacggtag gcagtctgat tatgacaatt atggttggcc agtgttcaat ccggtcatcc
4321 cattgcctca gatggactcc ttctacgtgg aggccgtcgc cgctggcaga tcaatgtacc
4381 cacctggttt cctcctaggt aggtatgacg cactagagta tctagtgcac actgcgacgg
4441 tgtatggcgc tgaggaagcc ttcttgcttc cgttcacgca tcatgtgaga gtgtatcccc
4501 ctccccgtcc agggagggag attcctttcg gctcgtggtg caagaactac aagttcgaag
4561 cagaaaggtt ttggtatgac gcggactgga aactgagggt ccacgaaacc aaccacgatt
4621 ttgacaggtt aatcgaaata acaaaaacct gtcgccgcaa cccccccgaa gaaaacttgc
4681 aagcaaaact ggaggacacc gcgcgcaagg tgtgtagtgt atggcaatat aacatcatga
4741 tcgcttcatc tgtcgcgttt ctagtgccat tatacttcac actctatgtg ccgtacctgc
4801 aattctactt gcatgttgac ccaggcgatt acatattgct tccaccggtg ctctggttgg
4861 tctggaccaa tctttgctac ggctacgcgt gtgacgcctg gtgccgttta tttttcttcg
4921 tagaggaggc gggaaagaaa gaacttgtcc attcaagtga ggagttttcc agtgacccgt
4981 catccacgct cttgatcccg acaatgggaa caagaggaga tcacgtgcca ccacggttct
5041 tcgccaacat ggcggtcctc gcaggtgtca agacccatct cttgaaactg cagactgcga
5101 cgtacggcga tttggagaac ctcaagaaag ggaagctcgg aagcttgttg ccaggctatc
5161 ttcagaacca ttactcggtg ctgaggggtt acaaagccgc gttcactccg catgtcgagc
5221 ttgacatgcc gaacgcaact tcgtacaact tagcaccgcc tcgcagctac atcaacaaga
5281 tacggtacct gaccgatgaa aatcggtcgg gcgccagtat gattgatcgc gctgtgacct
5341 ggttcgccga agaactggca gacacgttct ggcccgactg gcaaattggt tgccttagag
5401 gttgcaattt accgcgttcc gcggatggtg tttccctgat caccaaacaa cccaacctta
5461 aaacagggaa aatcggatgg ctacatggct ccgctgatcc agctgtggtg cctaaggaca
5521 tcagggacaa gtaccccctg gttccgaacg gtgaccacaa cgagatcttc aggcattatg
5581 ataagattta catgcctggt ggagccggtg ccgtccaaac cgcaatcgct tgtggatgcg
5641 aagtcgtcgt cacagacgtc aaccttgaca gagattatca cacaatgcct acgcagaaag
5701 actttcacca accctccata ctgccatact tcgcatggct gtggaggcaa gggtttgatg
5761 ttaaactgcc acgcgtgttg ctcgtcatag gctggctgaa gtttcattac tccatccgct
5821 acaagcatct ggaattcgcc gctgacttcg tcatcagggc tgggttgttc tggtggtatg
5881 ggtgcttgca cctactacca ttcatggcag ccgcgatcat ggcaccaagg ttcgttaaga
5941 agtacttggt tggcatggcg tggttaactg aacccggtct cctaatgctg aaggcgctgt
6001 ggcgttttcc aattttcatg gtcaccccaa ggtggatgct gccgttcatt gtaacggttt
6061 cggtatacaa ttggtggtgg ccgttatccc aagacgggct caactacgcg agcaaacggt
6121 ttgaattgat cttcgaaccg gtaactcggg gtaagcacac gttttcctac ccattcgggc
6181 actggtgttt gcgtgacacc aactcgatga ttgtttacga aggaaaattt gtcaacccaa
6241 gtgagacctc aatcgggtct cccttcaagt tgtcgaagtc cgttagaccg gtccgacctg
6301 gcgcagtgtt ccacctggtg cctttccacg tccagaagct tctggattca atggatgagg
6361 caccactacc ttacagcgcg aatcacaatt gcacgaccgt gatcctcaag gggatcatgt
6421 accgtagtgc actaggtttt gtattcgcgt atatggtttc gtgggcggtg tacctggtcc
6481 tccggcctcc tcaagccgcg gctaccgttt atcactgggt gtatcccgag cgatcgtggg
6541 acacatcaag gctgtatcat ctgctgctgg gtttcgcagc aggtggcacg gtgccaatgg
6601 aagtgataga cgaagagcac gttgaggaaa agccttcggt tgctggtcag tcagagccag
6661 ccgccgaaat cgacaatgac aaaatttctg actatgacca agaatggtgg gggagtcaag
6721 acagtattga cacagtggtt aacgacctgt gttacttgct gtccttcctg aaagatacgg
6781 cgatccctga agaggtcaaa ctcgatgtag tcgaactggc ttacacccag cttgtccagg
6841 acgaaaagga acgcatacca gaaccgaagg gaactaagat tctggacatg ccgaattgga
6901 agcctggcaa ctgggccaag ttaatagacg agacgcatcg ggtgctctcc cagtttactc
6961 aatatacacc gcgagttctc aacgaactcg tcgtgtggtt gaaaggacta ggggagaacc
7021 tctatagggt cgctgaaccc attcttatgc tattagtacg tgcgatgaga gctgccaaat
7081 ccgtgagtga tcgtgccaca cgttccgtat atcactgcct ctgccattgg ctagacgtga
7141 tgtatggcgg ctccgcccct accagggtga agaccgtgtg gggactcaca ggcctggtgg
7201 cttctggcat gaccagtcag aaagccatac tcgctcagaa catagcaatg atggaatacc
7261 agggcagagg gaatttcctt gatgattatg acaactttgt ctccaacatc aaggaacccg
7321 ggaaaggact acctggtata aacaccatcg gagggccaca acgacgtccg attcgataca
7381 agaaccctgt catgtctcac caggctgccg aaatctgtgg attgaagcct ggggagtatg
7441 aagtggatga taggtatcag gaaaggataa acgattacct tgcggaaggg atcccgcagg
7501 cagtcgatgg cgtcctcttt ggagacagga atcccgacag gatcgcgcga tccataagcc
7561 gatatgaacc cgaatactct ggctgttcgc ctgaggacaa ggccttggtg gaggataccg
7621 ccagggccat gttcgaacaa tggccagaag tgttcgccga tcgagacatc atgctcccta
7681 aaggtgtaga actttacatc aaagagaagt actcggcggg caccccgttc ataagctcgt
7741 tctataagag tagaaaggct cttaagcaag ctggtgtcat ggatgtgatc cgtaaaaacg
7801 cactggagtg catcagtacc ggtaaatacc ctacgcaatt ttaccacgcg ttcgcgaagt
7861 cacaagcggt tcctggccaa cctttgttgg ctccccgcat gaaggacttg cgaacggtgg
7921 tctccgagga tctatccgct tacatggtcg accagatctt tcagatcgag gccaacaagc
7981 gaataacctg ggaaacgtac ggtgccggtt ctggcatgcc tttgtcacaa tcgatggctc
8041 gcatttggga cgagctgcat gatttgagga aacgcgaagg agggcagttc atcattgctg
8101 atgcgactgc ctacgactca aactgtaaac cagcattgtt ccatggggct ggcaaactgg
8161 ttgagttagg tttccaaaat catccgagtg gcaaaggacg acaattcgca caagttgtcc
8221 agtgcaaatt cgaggccatg caaaatgcat gggtcatggg gataaccgaa ccttcctata
8281 ccgccttgac tttccacgtc cctgacgtgg cggtgaggca tgaactggaa tccaagtacc
8341 ctgcacactt tgcgacgttc agcgagcttc tggctcacaa taatgtgaac gtcactgagt
8401 ggaagaggtt atcttgggag gaacggaaag catgtgctcg tgacatgcag gccgttcctg
8461 gcaaggtttt ccttaccaat gatccagcat tgcgattgca aggctcgtca tggcaaggtt
8521 ctttcaccac cgaacccaaa agggacgaat tccggaaata ccaaacttat ttctatgatt
8581 cgaaggcggc aatgagagaa gatataaagc gtattgtctt cgccaatcgc gaagtcatat
8641 ccaacgtcca ccacaagaac cgtggtggag gcactggtca gagtgccact tcgtgggaca
8701 atacagctac attcaaactt ggcgtcatca gcgcctgggc acgcgctact ggtaaaccgc
8761 ccaaagattt cttttgttca aacaggctct acaatacgag cgatgacaca gtgtggtggt
8821 ctaaggacct gttatcctct gccgaggttg atcgcttcaa gcaagctgcc gccgattttg
8881 gcatcctgct tgagatcggg tcgaccaaga agataacaga agtggaatac ttatcgaagt
8941 tgccacgtcg cccaaccgca gaagattcag cggactatcg ggcatggagg cagggaagga
9001 tcgagaacat gcgatcctca ggccggttca gtgaagagca gcttctctcc attgaacgcg
9061 agcaactacc tcaattcctg atggtccaga accccacggc tattctaatg cgaaggactg
9121 ctttccgtta ttatcagagc agtccctcga agttcctgta cacctcgtgt gaacggggtg
9181 ccggtcacgc actcgtgacg gcattccagc ccgcactgta caagaggttc gcaattgagt
9241 acgccgagga cctgaatcgt ctctgcaagg agcaccacat caatcagcgc tacgagctcg
9301 tcagtcaaca agataggatg aagatgcagg ttataaacgt gaacccgaac tggaaacgga
9361 acttcaagtt gtcaccaaga caagaagcat tccttcggtg gatcaggcag gccaagtttc
9421 catcttatcg acaagttcta gacatacacc tcaggataag ggatcctgac ccatccgcgc
9481 atgatcgctt tatcgccaaa ctggatcgcg cttggcgcaa tccagatgag gggatccgtg
9541 atatagtgga cggggtgtat cgctacacgg acatgatacc tgaggagttt aaaaggttca
9601 tgccgtctac ggacatgctg tatgccgaga atccgtggca cactcacaac cagtatgtgg
9661 agaaattcat atacctcaag ttgctggaaa ccacgaccgt tgacgagctc acgttcgccc
9721 aatttgatgc cgtcgctaag gagtcccctt acggcatctg catgaatacg ataaagttct
9781 gggaagacct aagagaccct gactatctga aggatctctt ggcctccgag gccatgatag
9841 ataaggtgcg catctaccaa ggcatgactg tcatcatctc ggccatgtat ttcgcaatgc
9901 attgggtcga gctgtttatt cagtcactgt tcttgatagg gccattatat aatctattca
9961 tgtggtcgtt ctggggattg tcaaaagtct acggactggc gaacacgttt tattggcatg
10021 gtaaagcccg ctcgagcaga gaaatcagct cgatcctgcc aagagaccca tacatgtggt
10081 ctaaacgttt cgtcagcacg atggctgatt tcatccctga acgatttgct ctcggtatcg
10141 ttcccgtgac cttggtcttg gatggtctcg ccgagatcat cgaagttcta tttgggcgca
10201 tgtggagact gtttgcgaat ctgaaatcgg taggcaccga cttcagtgac gcacgatctg
10261 gcaaatcgtt aaatgtgccg tccaatcctt gggccgcgta cgcccacacg tacgcaacaa
10321 aagccatcga gcacggtcac gttactgtag ccgcaaaaac cgcttccggt aagtccactt
10381 tcttccccgc agcggtgtgg gcggagagga ggaacatcgg aatcaagaaa ctgtggatcg
10441 ttatgccaag gaagatcctc cgcgataact gggagattcc atttgacatc cgatctcaaa
10501 tcgtgaaacg gggcaaaaca ctagacccat cggccgatat ctacgtgacc acgtacggac
10561 atttccgaac gaggataggt ggactggtcc cgagggacaa cctggtgttc ttcgatgagt
10621 ttcacgaaat ggacggtttc atgctacagg acgtggaaga ctggaaagga ccaaccatct
10681 tcatgagtgc aactcctgtt gcacttcatg gaatggccgg catccctttt cttgagccaa
10741 cactgccaaa gcgtttcaat cttaccgttt acaaggttga ttccgatgac gtgttggaaa
10801 tgtggaaccg ggctcggaat cagtttgctg atcagcccga attgttggcc cgcccaatga
10861 tcatagtccc cacatataac gaactcaaga agacgattgc tggattggag aacttggaca
10921 ggtctatcac gtggcatgag gtgagcagta atagccccct cgtgcctaag actggtggcc
10981 tcgtgtgcac gccatatgta caaactggca tcgatatcaa acccgcgccg tcgatcttga
11041 tcgacagcgg ccgagatgtc attgtgcata agggtaggct agtcacaccc cacccctata
11101 cggacgagaa gaccaacgaa cagagggtca atcgtgtcgg taggacgatg gatggtgtgg
11161 tcatacagcc gcaactggct ggcacaggca accctcctgt caagtatcct agtgggattt
11221 tcttttcttc agagttagtc gcggggcagt acaaggtccc ccgattaact aaagtcaatg
11281 gttgtgtcca cccggaactg ccgtacatgt caatcaagta cacatccgag ctttcagacc
11341 ccgctaaagc aagggaggag gaacaaagcg tgacgaaatc gctcctgttt atccatctca
11401 tggcattggc gggcgtcagg cagtccgaat gggccttgcg ttacaatcga tactttgaac
11461 ttcaccttcc tttcggggaa gatgaagatc atttggagcg catcttaacg tcgggtaaac
11521 tgaggtatgc taaccacata ccagttgaca tggccatgca gttgctgggc aacgggcacg
11581 ttacatgggg catcggtggc gtccccacaa taacgcgacc aagatatcct tgtgatggga
11641 tgtgggtgga ggatccctcc tcccgtaagt catatgcgca caaggtactt ctacaccagc
11701 gggaacatgc agagatcggc atgtggcaag cgcaggtcaa cgagctcaga gcccagaacc
11761 ttgcccttca gtcacagctg agatcagcat gcacccgaag aagcacagca ggtcgcatct
11821 tacgacacac ccgtcctccg gatatacctg tttgcggtta acacaaaccg ccttccattt
11881 gtcatttcct ttgtcctttc cacgggagta gtgaccccgt gacacgccaa aaccagcacc
11941 tgaagtggat aactcaagcc tatgacatgg tcactgcccg tcagtaaaga cgttaacccg
12001 ggagctgatt ctgttaacag ccgcaccgcg aacggtacgt agattaaatc tacggttttc
12061 tgcctcctga gagattggca ggggaaaccc gctgaagagt ccaggaccga acacgaccac
12121 cattccggcg aatggttagg cctcgggaga tgcaattgtg cctcatcacc acacccacgt
12181 gaccaatgag accaactcgc aaaggagcag gaaacacagt gcaactgtcg gccagcaata
12241 gggctagaaa tactaaatac ctttaacttg gtggtaggcg tgtaccgaac gaccccggcc
12301 cagaagacca gggctgatgc ttgttaggca acggcaataa gaccgaagca agcacagaga
12361 ctggaaaagt aagccggatc cgtcgacgta ggatcgtcta catgttcaag aaatgggcga
12421 aaagggttgc ccgaaagtat gggctacgcg cttcgttgta aagctaccca tacaaaaccc
12481 ttcggcgcac tcacaactga aatgttagtg tttcaacatc tcaggagttt tagtgttacc
12541 gtcctgcgca agcaaagatg agaactatac ctttgacaac aaagggtata gggatcggaa
12601 aggccgctgc agtaggattc agacaaataa attttctctt gaaaatgtcc gccgttttct
12661 tttgttggct attccctttc accgtgcgta cggtgggaag agaacaacaa agaaaaaaaa
12721 aaaaaaaaaa aaaa
//GenBank-Updates@genbank.bio.net (05/03/91)
LOCUS HVALDSRNA 12734 bp ds-RNA VRL 03-MAY-1991
DEFINITION Cryphonectria parasitica hypovirulence-associated virus genomic
RNA.
ACCESSION M57938
KEYWORDS .
SOURCE Hypovirulence-associated virus genomic dsRNA from host
Cryphonectria parasitica strain EP713.
ORGANISM Hypovirulence-associated virus
Viridae; Fungal viruses; ds-RNA viruses.
REFERENCE 1 (bases 1 to 12734)
AUTHORS Shapira,R., Choi,G.H. and Nuss,D.L.
TITLE Virus-like genetic organization and expression strategy for a
double-stranded RNA genetic element associated with biological
control of chestnutblight
JOURNAL EMBO J. 10, 731-739 (1991)
STANDARD simple staff_review
FEATURES Location/Qualifiers
prim_transcript 1..12712
CDS 496..2364
/label=ORF A
/codon_start=496
CDS 2364..11861
/label=ORF B
/codon_start=2364
BASE COUNT 3127 a 3280 c 3381 g 2946 t
ORIGIN
1 gcctatgggt ggtctacata ggtgagcatg cgttgctcga tatagaccgc cattattggt
61 aacacgcttg aagtgttctc atccggagaa agtgatttgc tttcttccat gaggctccct
121 ggagggattg tccaataatg gttgataatt ttggttgctg cacaaccggg gctttgcccg
181 gggatttcat cccgttcaag gtgaggccct tgtagtaacc tctccccgct gcgtgagcga
241 atacataagt tcacccagta ctgacagtgt cagcgccgca cgtgcgtgaa acgtgtgact
301 cgcagactga agcgacctat ggtgaaaacg gatgtaccat ctagctgtgg agtagtgacc
361 ctagaagcta atccgatggt tccaccagtc gttgtttgcc ggcaaacgcc acaaacggtt
421 tcgtgctttg cgtgaagaag cacggtctct taagagttca ttggtacggt tgaccccgaa
481 cgaggtccga acataatggc tcaattaaga aaacccagtc agagtctggt gctctctgaa
541 agtgttgatc ctactacagt ggatcctttc gtcagcgtga ggacggaaga ggtggtccct
601 gcgggttgca taaccctatg ggagtacaga gactcatgtg gcgacgtgcc tggcccgttg
661 tcgcatggtg atctccggcg tttgcgcacc cctgacgggg tatgtaagtg ccaggtccac
721 tttgagttgc cgaccgtgct caagagtggt tccaccggaa cggtcccgga acaccccgcg
781 gtgttggctg ccttcattgg caggcctcgc cggtgttcct tggaacaacg tacgaaggag
841 ttggattccc gattccttca gttggtgcat ggtggcctcc ctgcgaggcc atcatacatg
901 attgcgcgcc cgcccaggcc agttcgaggc ctgtgctcat ctcggaacgg ttcccttgct
961 cagtttgggc agggctactg ttatctctcg gccattgtag acagcgcaag atggcgcgtc
1021 gcccgtacca ccggttggtg tgtacgtgtg gcagactatc ttaggctgct acaatgggtt
1081 ggtcgccggt cctttggctc ctttcagatt gagaaaagcg ccgtcgacca tgtttatcac
1141 gtggtcgtcg acgctgagta tcagtctgag caggatgggg cccttttcta ccaagccatt
1201 ttgggtttgg ccgagaagga tccccttgcc cggattggcg gccgattgaa cccgctcgct
1261 gccgagtttg cgcccggcag cgcccttagg gttgaacctg tgactccaca ggttacccgc
1321 cgtaaaggtt cgactcggat gactggtcgt gacccaacca ttgtctccgt tggcaaggtt
1381 ggtatggcca tcaccagcat ccaggatgct cttgtggcta cggagttgag gaacgtcaat
1441 ttcggccgtc gtgacacgga agctgagtgt cgtcgccttt gggcgagata cgaagtgaac
1501 gactatttcc gtcgtcacaa ggccgaactc ctcaagttcg atgcgcgcct tcggtcgcgc
1561 atggccaaga aacctgcgtc gtcacgggcc cgcccgtccg acgcaaagat tcagtgcata
1621 gggtggcgtg atcgccacct gttgccacaa cgccttgctg gtctctccaa acaaggccgt
1681 tccctcgtct ggtcgcggtt cgcgaccagc aacatcagac gcaagactcc gccttgtgtc
1741 gtcaacccca gtgcggaccc cgtcgtccat aactggaagg attccgctgc cctggcagtg
1801 aagaaaatcg ccgaagcacg ccggcgacaa gaaattcgcg ctgcagccta cgccgagcgg
1861 gccaaagctc gggggcagac caatgtcgtt gcttccattt cggaagcaat tgaaaccact
1921 ctacggcgga ataaaacccg ctttgccttg gatggtcttc atctggcggc atctgccatt
1981 gtcacgaccc ggttgaggtc gtggaaccaa gaggaaattc gtgctggtcg cgaatttcgt
2041 aaatcaacca cttcctggat atggaggcat gtgccttcat caatccagga cgccctgaac
2101 ctgacttcgg tcagggacaa gctcgacccc ggccgcgcgt ttggttacgt gcaggctgcg
2161 gttgcgcagg gcatgtccga cttccggagg gcaaagcggg cattggcgat cgtcgccaag
2221 cccgtaatcc ggaacatccg tgacccctat gagcacgggt ttgtcaagcg agatggtaag
2281 cttcgccatt ctcgcgacgc atttaataag aagctgcgta caaaggccgt ggccgccacg
2341 aaggtccaca aaataaaatt ttaatgtata aggaagccga acgacctatt gaagtgtggc
2401 gaacacaggt catggacggg ccaacatgga ctgccctttc tgagtcgtgc agggacaggt
2461 tgttctttgc atccggggaa ggtggtgagc acatgacgct cgatatcatc cagcctgatt
2521 cgtacaccaa gatacgctta tttcgcagcg gtcggttcga ggtgtcggtt gacggaaaga
2581 gttttggcca gggcggcaac cgttatagat tcgtctttcg ctatgactct ttgctgtcga
2641 caccttttgg atatcctgcc gaggacaagg aaatagcgct tcaggattac aatcacaagc
2701 agttgctggg tgagatgttc ttgaagcttc ctgactccta tgttgacggg agaccgatcg
2761 ctgaggcttt ctttcgttac gttgacgacc tgaaatggga tgtcggcgtg ttccgtgacc
2821 gcaggtcgct aacggaactt catttaccag catcatctgg tttaacaact gcacaagttt
2881 cggtggccaa actcgaatgg ccgccactac ctatcatcca ggcccagccg acaatactag
2941 ccggtatcat tgacaacttc aagatttgct tccccgtaaa cgggaaatgg atctatggtc
3001 aagggttgtc atggaccaga tacgatggcg atgcctccgt tccaacctct ctattgtcca
3061 accgacagca cgcgaggttc tggaacgaga aggacatccc caccggcctg aagctttcaa
3121 aggaaggctt catcaagctc tgggcccaga aatctcgcaa gtggcaggac cacatggcga
3181 gatcgatagg attaagtcac gaggccgctg tagagttggt tcgtgcaaca agagtgaacg
3241 aagcaaagcc ccatctcgtc cccatggaag aggcgaaaga ggcacctagg cagcagcttg
3301 ttcctaggcg ttcaactttc gtcgataacc atgaggagga ggttgagatt gacacccttc
3361 gggtgccggt cgaagagggt cgatgtttcg agctcttgtt caataatcaa gtaacccctg
3421 caattttcga caagaagcca ttgcttaaag acgtcctcgg cgtgttcgaa gagaatgtct
3481 gcacgatgga ctcgctcgaa atcagtcaca gtgaccaatg cgtgcacatt gtcgctggtg
3541 aaaccttccg gaactacgat gaaatcaaag ccgttctcga ggtcattctt gagaacgagc
3601 ctgacatcct cgttggagct gaagaaggtt cagtcgctga ttatgtgaaa gcgggcaaac
3661 acttcttgtt tgaaaaccac cagtgggtca gaaatgggct caagctagcg aagggtctag
3721 ctgaacctgg ccaaagggcc aaagataata ccaacccttc gacacctagg ccgattgaag
3781 acgctgacta cattcatcct tttgacaacg gacagcccct cccgggcagg tccgaccaat
3841 gggtcagcgg ctttgaagtg acgaggttac gtcaccatga cgaaatgcca cacattagga
3901 gtgtgaggaa cacgggcatc catgggctac ctggggattt cttgtcgaat taccctagac
3961 tgcctacgcc tgtatttcat cgcctccgcg atttgtggga tgatgtcatc ggcatactga
4021 tgaagcttga attcggggac aattgttcac cggtgctcaa cgtgactgct aatgcagact
4081 gggttcggtc agagacgacg ataaatttta tctctgacca acccggcaag gctcagtcac
4141 gtcctcgcga agatgggggt tttgacatcc tcgttccttg caggggcatc gcaacccgaa
4201 gcatcaggct tctgcctcta ttcatcagac tgccaaaccg tttcagggcc gtggctttgt
4261 taaacggtag gcagtctgat tatgacaatt atggttggcc agtgttcaat ccggtcatcc
4321 cattgcctca gatggactcc ttctacgtgg aggccgtcgc cgctggcaga tcaatgtacc
4381 cacctggttt cctcctaggt aggtatgacg cactagagta tctagtgcac actgcgacgg
4441 tgtatggcgc tgaggaagcc ttcttgcttc cgttcacgca tcatgtgaga gtgtatcccc
4501 ctccccgtcc agggagggag attcctttcg gctcgtggtg caagaactac aagttcgaag
4561 cagaaaggtt ttggtatgac gcggactgga aactgagggt ccacgaaacc aaccacgatt
4621 ttgacaggtt aatcgaaata acaaaaacct gtcgccgcaa cccccccgaa gaaaacttgc
4681 aagcaaaact ggaggacacc gcgcgcaagg tgtgtagtgt atggcaatat aacatcatga
4741 tcgcttcatc tgtcgcgttt ctagtgccat tatacttcac actctatgtg ccgtacctgc
4801 aattctactt gcatgttgac ccaggcgatt acatattgct tccaccggtg ctctggttgg
4861 tctggaccaa tctttgctac ggctacgcgt gtgacgcctg gtgccgttta tttttcttcg
4921 tagaggaggc gggaaagaaa gaacttgtcc attcaagtga ggagttttcc agtgacccgt
4981 catccacgct cttgatcccg acaatgggaa caagaggaga tcacgtgcca ccacggttct
5041 tcgccaacat ggcggtcctc gcaggtgtca agacccatct cttgaaactg cagactgcga
5101 cgtacggcga tttggagaac ctcaagaaag ggaagctcgg aagcttgttg ccaggctatc
5161 ttcagaacca ttactcggtg ctgaggggtt acaaagccgc gttcactccg catgtcgagc
5221 ttgacatgcc gaacgcaact tcgtacaact tagcaccgcc tcgcagctac atcaacaaga
5281 tacggtacct gaccgatgaa aatcggtcgg gcgccagtat gattgatcgc gctgtgacct
5341 ggttcgccga agaactggca gacacgttct ggcccgactg gcaaattggt tgccttagag
5401 gttgcaattt accgcgttcc gcggatggtg tttccctgat caccaaacaa cccaacctta
5461 aaacagggaa aatcggatgg ctacatggct ccgctgatcc agctgtggtg cctaaggaca
5521 tcagggacaa gtaccccctg gttccgaacg gtgaccacaa cgagatcttc aggcattatg
5581 ataagattta catgcctggt ggagccggtg ccgtccaaac cgcaatcgct tgtggatgcg
5641 aagtcgtcgt cacagacgtc aaccttgaca gagattatca cacaatgcct acgcagaaag
5701 actttcacca accctccata ctgccatact tcgcatggct gtggaggcaa gggtttgatg
5761 ttaaactgcc acgcgtgttg ctcgtcatag gctggctgaa gtttcattac tccatccgct
5821 acaagcatct ggaattcgcc gctgacttcg tcatcagggc tgggttgttc tggtggtatg
5881 ggtgcttgca cctactacca ttcatggcag ccgcgatcat ggcaccaagg ttcgttaaga
5941 agtacttggt tggcatggcg tggttaactg aacccggtct cctaatgctg aaggcgctgt
6001 ggcgttttcc aattttcatg gtcaccccaa ggtggatgct gccgttcatt gtaacggttt
6061 cggtatacaa ttggtggtgg ccgttatccc aagacgggct caactacgcg agcaaacggt
6121 ttgaattgat cttcgaaccg gtaactcggg gtaagcacac gttttcctac ccattcgggc
6181 actggtgttt gcgtgacacc aactcgatga ttgtttacga aggaaaattt gtcaacccaa
6241 gtgagacctc aatcgggtct cccttcaagt tgtcgaagtc cgttagaccg gtccgacctg
6301 gcgcagtgtt ccacctggtg cctttccacg tccagaagct tctggattca atggatgagg
6361 caccactacc ttacagcgcg aatcacaatt gcacgaccgt gatcctcaag gggatcatgt
6421 accgtagtgc actaggtttt gtattcgcgt atatggtttc gtgggcggtg tacctggtcc
6481 tccggcctcc tcaagccgcg gctaccgttt atcactgggt gtatcccgag cgatcgtggg
6541 acacatcaag gctgtatcat ctgctgctgg gtttcgcagc aggtggcacg gtgccaatgg
6601 aagtgataga cgaagagcac gttgaggaaa agccttcggt tgctggtcag tcagagccag
6661 ccgccgaaat cgacaatgac aaaatttctg actatgacca agaatggtgg gggagtcaag
6721 acagtattga cacagtggtt aacgacctgt gttacttgct gtccttcctg aaagatacgg
6781 cgatccctga agaggtcaaa ctcgatgtag tcgaactggc ttacacccag cttgtccagg
6841 acgaaaagga acgcatacca gaaccgaagg gaactaagat tctggacatg ccgaattgga
6901 agcctggcaa ctgggccaag ttaatagacg agacgcatcg ggtgctctcc cagtttactc
6961 aatatacacc gcgagttctc aacgaactcg tcgtgtggtt gaaaggacta ggggagaacc
7021 tctatagggt cgctgaaccc attcttatgc tattagtacg tgcgatgaga gctgccaaat
7081 ccgtgagtga tcgtgccaca cgttccgtat atcactgcct ctgccattgg ctagacgtga
7141 tgtatggcgg ctccgcccct accagggtga agaccgtgtg gggactcaca ggcctggtgg
7201 cttctggcat gaccagtcag aaagccatac tcgctcagaa catagcaatg atggaatacc
7261 agggcagagg gaatttcctt gatgattatg acaactttgt ctccaacatc aaggaacccg
7321 ggaaaggact acctggtata aacaccatcg gagggccaca acgacgtccg attcgataca
7381 agaaccctgt catgtctcac caggctgccg aaatctgtgg attgaagcct ggggagtatg
7441 aagtggatga taggtatcag gaaaggataa acgattacct tgcggaaggg atcccgcagg
7501 cagtcgatgg cgtcctcttt ggagacagga atcccgacag gatcgcgcga tccataagcc
7561 gatatgaacc cgaatactct ggctgttcgc ctgaggacaa ggccttggtg gaggataccg
7621 ccagggccat gttcgaacaa tggccagaag tgttcgccga tcgagacatc atgctcccta
7681 aaggtgtaga actttacatc aaagagaagt actcggcggg caccccgttc ataagctcgt
7741 tctataagag tagaaaggct cttaagcaag ctggtgtcat ggatgtgatc cgtaaaaacg
7801 cactggagtg catcagtacc ggtaaatacc ctacgcaatt ttaccacgcg ttcgcgaagt
7861 cacaagcggt tcctggccaa cctttgttgg ctccccgcat gaaggacttg cgaacggtgg
7921 tctccgagga tctatccgct tacatggtcg accagatctt tcagatcgag gccaacaagc
7981 gaataacctg ggaaacgtac ggtgccggtt ctggcatgcc tttgtcacaa tcgatggctc
8041 gcatttggga cgagctgcat gatttgagga aacgcgaagg agggcagttc atcattgctg
8101 atgcgactgc ctacgactca aactgtaaac cagcattgtt ccatggggct ggcaaactgg
8161 ttgagttagg tttccaaaat catccgagtg gcaaaggacg acaattcgca caagttgtcc
8221 agtgcaaatt cgaggccatg caaaatgcat gggtcatggg gataaccgaa ccttcctata
8281 ccgccttgac tttccacgtc cctgacgtgg cggtgaggca tgaactggaa tccaagtacc
8341 ctgcacactt tgcgacgttc agcgagcttc tggctcacaa taatgtgaac gtcactgagt
8401 ggaagaggtt atcttgggag gaacggaaag catgtgctcg tgacatgcag gccgttcctg
8461 gcaaggtttt ccttaccaat gatccagcat tgcgattgca aggctcgtca tggcaaggtt
8521 ctttcaccac cgaacccaaa agggacgaat tccggaaata ccaaacttat ttctatgatt
8581 cgaaggcggc aatgagagaa gatataaagc gtattgtctt cgccaatcgc gaagtcatat
8641 ccaacgtcca ccacaagaac cgtggtggag gcactggtca gagtgccact tcgtgggaca
8701 atacagctac attcaaactt ggcgtcatca gcgcctgggc acgcgctact ggtaaaccgc
8761 ccaaagattt cttttgttca aacaggctct acaatacgag cgatgacaca gtgtggtggt
8821 ctaaggacct gttatcctct gccgaggttg atcgcttcaa gcaagctgcc gccgattttg
8881 gcatcctgct tgagatcggg tcgaccaaga agataacaga agtggaatac ttatcgaagt
8941 tgccacgtcg cccaaccgca gaagattcag cggactatcg ggcatggagg cagggaagga
9001 tcgagaacat gcgatcctca ggccggttca gtgaagagca gcttctctcc attgaacgcg
9061 agcaactacc tcaattcctg atggtccaga accccacggc tattctaatg cgaaggactg
9121 ctttccgtta ttatcagagc agtccctcga agttcctgta cacctcgtgt gaacggggtg
9181 ccggtcacgc actcgtgacg gcattccagc ccgcactgta caagaggttc gcaattgagt
9241 acgccgagga cctgaatcgt ctctgcaagg agcaccacat caatcagcgc tacgagctcg
9301 tcagtcaaca agataggatg aagatgcagg ttataaacgt gaacccgaac tggaaacgga
9361 acttcaagtt gtcaccaaga caagaagcat tccttcggtg gatcaggcag gccaagtttc
9421 catcttatcg acaagttcta gacatacacc tcaggataag ggatcctgac ccatccgcgc
9481 atgatcgctt tatcgccaaa ctggatcgcg cttggcgcaa tccagatgag gggatccgtg
9541 atatagtgga cggggtgtat cgctacacgg acatgatacc tgaggagttt aaaaggttca
9601 tgccgtctac ggacatgctg tatgccgaga atccgtggca cactcacaac cagtatgtgg
9661 agaaattcat atacctcaag ttgctggaaa ccacgaccgt tgacgagctc acgttcgccc
9721 aatttgatgc cgtcgctaag gagtcccctt acggcatctg catgaatacg ataaagttct
9781 gggaagacct aagagaccct gactatctga aggatctctt ggcctccgag gccatgatag
9841 ataaggtgcg catctaccaa ggcatgactg tcatcatctc ggccatgtat ttcgcaatgc
9901 attgggtcga gctgtttatt cagtcactgt tcttgatagg gccattatat aatctattca
9961 tgtggtcgtt ctggggattg tcaaaagtct acggactggc gaacacgttt tattggcatg
10021 gtaaagcccg ctcgagcaga gaaatcagct cgatcctgcc aagagaccca tacatgtggt
10081 ctaaacgttt cgtcagcacg atggctgatt tcatccctga acgatttgct ctcggtatcg
10141 ttcccgtgac cttggtcttg gatggtctcg ccgagatcat cgaagttcta tttgggcgca
10201 tgtggagact gtttgcgaat ctgaaatcgg taggcaccga cttcagtgac gcacgatctg
10261 gcaaatcgtt aaatgtgccg tccaatcctt gggccgcgta cgcccacacg tacgcaacaa
10321 aagccatcga gcacggtcac gttactgtag ccgcaaaaac cgcttccggt aagtccactt
10381 tcttccccgc agcggtgtgg gcggagagga ggaacatcgg aatcaagaaa ctgtggatcg
10441 ttatgccaag gaagatcctc cgcgataact gggagattcc atttgacatc cgatctcaaa
10501 tcgtgaaacg gggcaaaaca ctagacccat cggccgatat ctacgtgacc acgtacggac
10561 atttccgaac gaggataggt ggactggtcc cgagggacaa cctggtgttc ttcgatgagt
10621 ttcacgaaat ggacggtttc atgctacagg acgtggaaga ctggaaagga ccaaccatct
10681 tcatgagtgc aactcctgtt gcacttcatg gaatggccgg catccctttt cttgagccaa
10741 cactgccaaa gcgtttcaat cttaccgttt acaaggttga ttccgatgac gtgttggaaa
10801 tgtggaaccg ggctcggaat cagtttgctg atcagcccga attgttggcc cgcccaatga
10861 tcatagtccc cacatataac gaactcaaga agacgattgc tggattggag aacttggaca
10921 ggtctatcac gtggcatgag gtgagcagta atagccccct cgtgcctaag actggtggcc
10981 tcgtgtgcac gccatatgta caaactggca tcgatatcaa acccgcgccg tcgatcttga
11041 tcgacagcgg ccgagatgtc attgtgcata agggtaggct agtcacaccc cacccctata
11101 cggacgagaa gaccaacgaa cagagggtca atcgtgtcgg taggacgatg gatggtgtgg
11161 tcatacagcc gcaactggct ggcacaggca accctcctgt caagtatcct agtgggattt
11221 tcttttcttc agagttagtc gcggggcagt acaaggtccc ccgattaact aaagtcaatg
11281 gttgtgtcca cccggaactg ccgtacatgt caatcaagta cacatccgag ctttcagacc
11341 ccgctaaagc aagggaggag gaacaaagcg tgacgaaatc gctcctgttt atccatctca
11401 tggcattggc gggcgtcagg cagtccgaat gggccttgcg ttacaatcga tactttgaac
11461 ttcaccttcc tttcggggaa gatgaagatc atttggagcg catcttaacg tcgggtaaac
11521 tgaggtatgc taaccacata ccagttgaca tggccatgca gttgctgggc aacgggcacg
11581 ttacatgggg catcggtggc gtccccacaa taacgcgacc aagatatcct tgtgatggga
11641 tgtgggtgga ggatccctcc tcccgtaagt catatgcgca caaggtactt ctacaccagc
11701 gggaacatgc agagatcggc atgtggcaag cgcaggtcaa cgagctcaga gcccagaacc
11761 ttgcccttca gtcacagctg agatcagcat gcacccgaag aagcacagca ggtcgcatct
11821 tacgacacac ccgtcctccg gatatacctg tttgcggtta acacaaaccg ccttccattt
11881 gtcatttcct ttgtcctttc cacgggagta gtgaccccgt gacacgccaa aaccagcacc
11941 tgaagtggat aactcaagcc tatgacatgg tcactgcccg tcagtaaaga cgttaacccg
12001 ggagctgatt ctgttaacag ccgcaccgcg aacggtacgt agattaaatc tacggttttc
12061 tgcctcctga gagattggca ggggaaaccc gctgaagagt ccaggaccga acacgaccac
12121 cattccggcg aatggttagg cctcgggaga tgcaattgtg cctcatcacc acacccacgt
12181 gaccaatgag accaactcgc aaaggagcag gaaacacagt gcaactgtcg gccagcaata
12241 gggctagaaa tactaaatac ctttaacttg gtggtaggcg tgtaccgaac gaccccggcc
12301 cagaagacca gggctgatgc ttgttaggca acggcaataa gaccgaagca agcacagaga
12361 ctggaaaagt aagccggatc cgtcgacgta ggatcgtcta catgttcaag aaatgggcga
12421 aaagggttgc ccgaaagtat gggctacgcg cttcgttgta aagctaccca tacaaaaccc
12481 ttcggcgcac tcacaactga aatgttagtg tttcaacatc tcaggagttt tagtgttacc
12541 gtcctgcgca agcaaagatg agaactatac ctttgacaac aaagggtata gggatcggaa
12601 aggccgctgc agtaggattc agacaaataa attttctctt gaaaatgtcc gccgttttct
12661 tttgttggct attccctttc accgtgcgta cggtgggaag agaacaacaa agaaaaaaaa
12721 aaaaaaaaaa aaaa
//