GenBank-Updates@genbank.bio.net (05/08/91)
LOCUS HUMCOLAI1A 2256 bp ds-DNA PRI 08-MAY-1991
DEFINITION Human alpha-1 collagen type I gene, exon 1.
ACCESSION J03559
KEYWORDS collagen.
SOURCE Human DNA, clone pUC19-E.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 2256)
AUTHORS Bornstein,P., McKay,J., Morishima,J.K., Devarayalu,S. and
Gelinas,R.E.
TITLE Regulatory elements in the first intron contribute to
transcriptional control of the human alpha-1(I) collagen gene
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 84, 8869-8873 (1987)
STANDARD full staff_entry
COMMENT Draft entry and computer-readable sequence for [Proc. Natl. Acad.
Sci. U.S.A. 84, 8869-8873 (1987)] kindly provided
by P.Bornstein, 23-NOV-1987.
FEATURES Location/Qualifiers
prim_transcript 805..>2256
/note="col mRNA and intron"
CDS 924..>1026
/partial
/note="alpha-1(I) collagen precursor, exon 1
/nomgen='COL1A1' /map='17q21.3-q22'
/hgml_locus_uid='LG0047H'"
/codon_start=924
sig_peptide 924..989
/note="alpha-1(I) collagen signal peptide"
/codon_start=924
mat_peptide 990..>1026
/partial
/note="alpha-1(I) collagen"
/codon_start=990
intron 1027..>2256
/note="col intron A"
BASE COUNT 426 a 682 c 688 g 460 t
ORIGIN 1 bp upstream of HindIII site; chromosome 17q21.3-q22.
1 aagctttctt ctgcagaggc cacctagtca tgtttctcac cctgcacctc agcctcccca
61 ctccatctct caatcatgcc tagggtttgg aggaaggcat ttgattctgt tctggagcac
121 agcagaagaa ttgacatcct caaaattaaa actcccttgc ctgcacccct ccctcagata
181 tctgattctt aatgtctaga aaggaatctg taaattgttc cccaaatatt cctaagctcc
241 atcccctagc cacaccagaa gacaccccca aacaggcaca tctttttaat tcccagcttc
301 ctctgttttg gagaggtcct cagcatgcct ctttatgccc ctcccttagc tcttgccagg
361 atatcagagg gtgactgggg cacagccagg aggaccccct ccccaacacc cccaaccctt
421 ccacctttgg aagtctcccc acccagctcc ccagttcccc agttccactt cttctagatt
481 ggaggtccca ggaagagagc agaggggcac ccctacccac tggttagccc acgccattct
541 gaggacccag ctgcacccct accacagcac ctctggccca ggctgggctg gggggctggg
601 gaggcagagc tgcgaagagg ggagatgtgg ggtggactcc cttccctcct cctccccctc
661 tccattccaa ctcccaaatt gggggccggg ccaggcagct ctgattggct ggggcacggg
721 cggccggctc cccctctccg aggggcaggg ttcctccctg ctctccatca ggacagtata
781 aaaggggccc gggccagtcg tcggagcaga cgggagtttc tcctcggggt cggagcagga
841 ggcacgcgga gtgtgaggcc acgcatgagc ggacgctaac cccctcccca gccacaaaga
901 gtctacatgt ctagggtcta gacatgttca gctttgtgga cctccggctc ctgctcctct
961 tagcggccac cgccctcctg acgcacggcc aagaggaagg ccaagtcgag ggccaagacg
1021 aagacagtaa gtcccaaact tttgggagtg caaggatact ctatatcgcg ccttgcgctt
1081 ggtcccgggg gccgcggctt aaaacgagac gtggatgatc cggagactcg ggaatggaag
1141 ggagatgatg agggctcttc ctcggcgccc tgagacagga gggagctcac cctggggcga
1201 ggttggggtt gaacgcgccc cgggagcggg aggtgagggt ggagcgcggc gtgagttggt
1261 gcaagagaga atcccgagcg cgcaaccggg gaagtgggga tcttgggtgc agagtgagga
1321 aagcacgtcg aagatgggat gggggcgccg agcggggcat ttgaagccca agatgtagaa
1381 gcaatcagga aggccgtggg atgattcata aggaaagatt gccctctctg cgggctagag
1441 tgttgctggg gccgtggggg tgctgggcag ccgcggaggg ggtgcggagc gtgggcgggt
1501 ggaggatgag aaactttggc gcggactcgg cggggcgggg tccttgcgcc ccctgctgac
1561 cgatgctgag cactgcgtct cccggtccaa cgcttactgg ggcaggagcc ggagcgggaa
1621 gacccgggtt attgctgggt gcggaccccc acctgctaga tctggaaagt aaagccaggg
1681 atggggcagc ccaagcctct taaagaggta gtcgggccgg tgaggtcggc cccgccccgg
1741 ccccattgct tagcgttgcc cgacacctag tggccgtctg gggagccgct agcgcggtgg
1801 gagtggttag ctaacttctg gactatttgc ggactttttg gttctttggc taaaagtgac
1861 ctggaggcat tggctggctt tggggactgg ggatggcccg agagcggctt ttaagttgtc
1921 taggtgctgg aggttagggt gtctcctaat ttaggtacat ttcaagtctt gggggggcct
1981 cccttccaat cagccgctcc cattctccta gccccgcccc cgccacccca cctgcccagg
2041 gaatgggggc gggatgaggg ctggacctcc cttctctcct ccctcgccct cctcctgtct
2101 ctaccacgca agccactccc cacgagcctg ccctcccgat ggggcccctc ctattctccc
2161 cccgccctcc ccctctcacc ctgtggtttt tatttcactt ggcttcagcg ccaatgggct
2221 gaggttggag ttggaagcca ccgcggacta aagctt
//