GenBank-Updates@genbank.bio.net (05/08/91)
LOCUS YSCTYA117 11220 bp ds-DNA PLN 08-MAY-1991
DEFINITION Yeast transposon Ty1-17 and flanking Glu-tRNA and Leu-tRNA genes,
and beta-isopropylmalate dehydrogenase LEU2) gene, complete cds.
ACCESSION X03840 M19542 X02991
KEYWORDS Ty1 transposon B10; beta-isopropylmalate dehydrogenase;
transfer RNA-Glu; transfer RNA-Leu.
SOURCE Yeast (S.cerevisiae) DNA.
ORGANISM Saccharomyces cerevisiae
Eukaryota; Plantae; Thallobionta; Eumycota; Hemiascomycetes;
Endomycetales; Saccharomycetaceae.
REFERENCE 1 (bases 2885 to 9388)
AUTHORS Warmington,J.R., Waring,R.B., Newlon,C.S., Indge,K.J. and
Oliver,S.G.
TITLE Nucleotide sequence characterization of Ty 1-17, a class II
transposon from yeast
JOURNAL Nucleic Acids Res. 13, 6679-6693 (1985)
STANDARD simple automatic
REFERENCE 2 (bases 1 to 3840)
AUTHORS Warmington,J.R., Anwar,R., Newlon,C.S., Waring,R.B., Davies,R.W.,
Indge,K.J. and Oliver,S.G.
TITLE A 'hot-spot' for Ty transposition on the left arm of yeast
chromosome III
JOURNAL Nucleic Acids Res. 14, 3475-3485 (1986)
STANDARD simple staff_review
REFERENCE 3 (bases 1 to 11220)
AUTHORS Warmington,J.R.
JOURNAL Unpublished (1987) Univ. of Manchester, Manchester M60 1QD UK
STANDARD simple staff_review
COMMENT EMBL features not translated to GenBank features:
key from to description
SITE 1575 1590 delta insert
SITE 1627 1636 delta insert
RPT 1818 1680 (C) repeat delta sequence
RPT 1819 1878 repeat delta sequence
RPT 2680 2685 direct repeat 1
RPT 2685 2910 repeat delta A sequence
RPT 2906 2910 direct repeat 2
RPT 2911 3243 repeat delta B sequence
RPT 3244 3378 repeat delta A sequence
RPT 3244 3248 direct repeat 2
RPT 3378 3382 direct repeat 1
TPOSON 3427 9388 Ty 1-17
RPT 3427 3758 direct repeat, delta sequence
PRM 3593 3599 put. TATA-box
RBS 3667 3671 put. rRNA binding site
SITE 3759 9056 epsilon sequence
SITE 3759 3782 sequence homologous to yeast
tRNA-Met
INVREP 3819 3832 inverted repeat A
SITE 4075 4092 put. regulatory region; sequence
homologous to diploid control site
OPR 4215 4229 enhancer-like element
SITE 4241 4258 put. regulatory region; sequence
homologous to diploid control site
RPT 9057 9388 direct repeat, delta sequence
INVREP 9170 9183 inverted repeat A'
OPR 9309 9312 5' end of put. transcript
termination signal
SITE 9357 9362 transcription termination region
FEATURES Location/Qualifiers
tRNA 1428..1499
/note="Glu-tRNA"
CDS 3718..5034
/note="TYA"
/codon_start=3718
CDS 4991..9034
/note="TYB"
/codon_start=4991
tRNA 9478..9594
/note="Leu-tRNA"
CDS 9943..11037
/note="beta-isopropylmalate dehydrogenase (LEU 2)"
/codon_start=9943
BASE COUNT 3998 a 2177 c 1933 g 3112 t
ORIGIN 1 bp upstream of BamHI site; chromosome III.
1 ggatcccgga ttaacgcctg ttactgagac acttcctaac aacctaaaag aaaaaacagc
61 tctgctgcag gatactgaaa agaaaataat agaaacgata cgcagatcca aatttttagg
121 atcgctacta aatgttagag ggggactatc gccagggaaa agtgaactgg cacctatcga
181 agagtctccc atagtttcaa ccacaccact aatatataat gatcgaatgg aacctcgtag
241 gatatccgat gtggaagtcc cacatttcac gaggaaatca aaacacttta ctactgctaa
301 taatcggcgc tcagtcttat ctttgtatgc gaaggattca atcaaagact taaacgaatt
361 tttaataaag gaagatcctg atttgcctcc acaaggaagc actgataacg aaagtaggag
421 cgaagatccc gaaatagccg agagtatcac tgattcaagg aatatacaat atgatgagga
481 tgatagtaag gatggtgata atgtgaataa tgataatata ttgagcgact ttccctcaag
541 gcgttggcat atcacaggaa tacgacatga aggataaaaa tccaaaccaa tctccaatat
601 caaaaagcgc agagcccaca ctggtagtga aacttccgtc tttgagttct ttccaaggaa
661 aaaacgccag tgggttgggc ctataccaaa gagagccttc taaggtaacc ttaccgagcc
721 ttacaagtaa taacagcagc gtcggagaaa acactagagg atggggcgga aaaagggact
781 gagagtgaga aaatcgctgc ttccctgtca gacgatgact tgaaggaaga taatgacaag
841 aaagataacg acacagtgaa tgccctacta cagtaaaaaa gccacctaac agcgtactct
901 tgaaaaaatt ctcaaaaggt aaaatcttag aacttgaaat acatgccaaa atacctgaaa
961 agagactata cgagggccta cataaactac tagaaggctg gaagcaatac gggttgaaaa
1021 acctggtgtt taacatcact aatatgatca taacaggaaa attggtgaat gacagtattt
1081 tatttttacg atctacgctt tttgaaataa tggttttacc aaatggagac ggtagaagtt
1141 taattaaatt caataagaaa acaggatcta ctaaaacgct gaccaagctt gctacagaaa
1201 tccaaattat tttacaaaaa gaaggtgttt tggacaaata aaaaaaaggg agggataatc
1261 tatccccaaa tggacaatac gatgtaacac cgttatataa ttaataaatg tatatatgta
1321 actatttttt gaaaaaaata aaatggtaat ttattaaata tttggaccgg tcaacaatct
1381 cagatatagt tgaaaaaatc tttaattgta atagcagaaa aaaaaaactc cgatacgggg
1441 agtcgaaccc cggtctccac ggtgaaagcg tgatgtgata gccgttacac tatatcggat
1501 aacaaattat taaaattatt taataaaaag atgaactaat ggtgtataaa aacatcataa
1561 aaactcaact caactgttcc aataaaatct gcaatttaaa ttaattattc tgaaaaaaca
1621 cgtaaattgt tggaatggaa ccctaaaata tttcctcttt agtactattc atgttacttg
1681 agaaatgggt gaattttgag atagttgttg ggattccatt gttgataaag gctaataata
1741 ttaggtatac agaatatgct agaggttctc ctcgagcata taggaatcct caaaatggaa
1801 ttagcatttc tacataataa cctcaattcc cttttgtgga ttcacatatt ctcgatcgga
1861 actcctagca tagtgcagac aacactcaca tagctctccc atttatcaag ttggaattca
1921 ctccaagaaa ttttcttgct tctctctttc ccacagaaat gaaaaggaac agtttggcgg
1981 ctattgtttt agcccttact ttttggaccc tttgaaaaaa tgccaagaat gcgtgacggt
2041 ttccctccat gctcgagaac cacaaaaacc ctatgtggta ttcgattatg cgactcacgg
2101 caaatatttg acttgtcaaa gttattcggg atttccttga atccctgaga agtgaaatgg
2161 aaagaattta agggcataaa tacctttcaa gcacccagaa gaacagtaaa ataaagcaag
2221 gtacgtgaaa ttaatatttt taaatggttc taaccgatgc cgaagaactg cgcgatccgg
2281 ttataacgtc tgacatgtcc ttttttgatt tggaatccaa ccactcagtg actctgtcat
2341 tacttgcgaa attattccac aaattccatc gaaagtgaat cgcaaaccac cttcagactg
2401 gcaccgacaa agcaaagatt atacagacag agtactttat acgtaccgtt aagtctcaag
2461 caaagggttt tcttatttac tgaacgggta aagagtatct gggccggctt gccaagatgc
2521 aaaccgaata agtatttcaa agttgcattt gccttagccg tcctgacacc attggctatt
2581 tggatatttt atattgactt tcgtgtacat tgatcacatc gactgttcta ttggcaaatg
2641 aaccacgggc attgactatt tttcaggtta ctactatata ttattgttgg aataaaaatc
2701 aactatcatc tactaactag tatttacgtt actagtatat tatcatatac ggtgttagaa
2761 gatgacgcaa atgatgagaa atagtcatct aaattagtgg aagctgaaac acaaggattg
2821 ataatgtaat aggatcaatg aatattaaca tataaaatga tgataataat atttatagaa
2881 ttgtgtagaa ttgcagattc ccttttatgg tgttggaata aaaatcaact atcatctact
2941 aactagtatt tacgttacct agtatattat catatacggt gttagaagat gacgcaaatg
3001 atgagaaata gtcatctaaa ttagtggaag ctgaaacgca aggattgata atgtaatagg
3061 atcaatgaat attaacatat aaaatgatga taataatatt tatagaattg tgtagaattg
3121 cagattccct tttatggatt cctaaatcct cgaggagaac ttctagtata tctacatacc
3181 taatattatt gccttataaa aaatggaatc ccaacaatta catcaaaatc cacgttcttt
3241 tcatatggat tcctaaatcc tcgaggagaa tttataatat agtctgtata cataatatta
3301 tagcttctaa cgacaatgga attctaacaa ttatcaaatt gccgccagtt cctcaaaaag
3361 atccatgtat aatcttcatt attacagccc tcttgacctc taatcatgaa tgttctcaaa
3421 taaatctgtt ggaataaaaa tcaactatca tctactaact agtatttacg ttactagtat
3481 attatcatat acggtgttag aagatgacgc aaatgatgag aaatagtcat ctaaattagt
3541 ggaagctgaa acgcaaggat tgataatgta ataggatcaa tgaatattaa catataaaat
3601 gatgataata atatttatag aattgtgtag aattgcagat tcccttttat ggattcctaa
3661 atcctcgagg agaacttcta gtatatctac atacctaata ttattgcctt ataaaaaatg
3721 gaatcccaac aattacatca aaatccacgt tctcttcatg gtagcgccta tgcttcggtt
3781 acttctaagg aagtcccatc aaatcaagat ccgttagccg tttcagcttc caatttaccg
3841 gaatttgata gagattccac taaggttaat tctcaacaag agacaacacc tgggacatca
3901 gctgttccag agaaccatca tcatgtctct cctcaacctg cttcagtacc acctccacag
3961 aatggacagt accaacagca cggcatgatg accccaaaca aagctatggc ctctaactgg
4021 gcacattacc aacaaccgtc tatgatgacg tgttcacatt atcaaacgtc acctgcgtat
4081 tatcaaccgg acccacacta tccgttgcca cagtatatcc caccactgag tacttcctca
4141 cctgatccaa tcgattcaca gaatcaacac tctgaagtac ctcaagctga gacaaaggtg
4201 agaaataacg tcttaccacc acacacttta acatcagatg aaaacttttc tacatgggtt
4261 aaattttaca tcagattttt gaagaactct aatctcggtg acatcattcc aaatgaccag
4321 ggtgaaatca aaagacaaat gacttatgaa gaacatgcgt atatatacaa taccttccaa
4381 gcatttgccc catttcattt attgccaaca tgggtaaaac aaattttaga aattaattat
4441 gctgacatcc ttacagtcct ttgtaaaagt gtgtccaaaa tgcaaactaa caatcaagaa
4501 ttaaaggatt ggatagctct tgccaacctt gagtacgacg gaagtacatc tgctgataca
4561 tttgaaatta cagtcagtac gatcattcag aggctaaaag aaaacaatat caatgttagc
4621 gacagattgg cctgtcaact aatacttaaa ggtctatccg gtgacttcaa atacctacgt
4681 aatcaatatc gtaccaaaac gaacatgaaa ctttcccaat tattcgctga aattcagtta
4741 atatatgacg aaaataaaat catgaatcta aataaaccgt cccaatacaa acaacacagc
4801 gaatacaaaa atgtttctcg cacatctcca aacacgacta acacaaaggt tacaactcgt
4861 aattatcaga gaacaaatag ttcaaaacca agagcagcaa aagctcacaa tattgctaca
4921 tctagtaaat tctcaagggt gaacaatgat cacattaatg aatcaaccgt ttcatcacaa
4981 tacttaagcg atgacaacga acttagtctt aggccagcaa cagaaagaat ctaagccaac
5041 acacacaata gactcgaatg acgaactacc tgatcacctt cttattgatt caggacgttc
5101 gcaaacgctt gtcagatcag cccattattt acaccatgca acacccaatt ctgaaataaa
5161 catagtcgat gctcaaaaac aagacattcc tataaatgcc attggtaatc ttcacttcaa
5221 ctttcagaac ggcaccaaaa catcaataaa agcactacac acaccaaaca tagcctatga
5281 tctattaagt ttgagtgagc tggctaatca aaatattaca gcctgcttta ccagaaacac
5341 tttagaaaga tcggatggta cagtcctagc tcccatagtc aaacatggag acttttactg
5401 gttatctaaa aaatacctaa ttccttcgca catttcaaag ctaacaataa acaacgtcaa
5461 caaaagcaaa agcgtaaata aatatccata tccgttaata catcgaatgc ttggacatgc
5521 taacttccga agtattcaga agtctcttaa gaagaatgca gttacatatt tgaaggaatc
5581 ggatattgaa tggtctaacg catgcacata tcaatgtcct gactgtctaa tcggcaaaag
5641 cacgaaacat agacatgtca aaggatcacg actaaagtac caagaatcat atgagccttt
5701 tcagtacttg cataccgata tatttggtcc tgtacatcac ttaccgaaaa gtgcaccttc
5761 ttactttata tcgtttacag atgagaaaac cagattccaa tgggtgtacc cattacacga
5821 ccgtcgtgaa gaatctatcc tcaatgtttt tacatcgata ttagcattta ttaagaacca
5881 attcaatgct cgcgttctag ttatccagat ggatcgtggc tccgagtaca ctaacaaaac
5941 tcttcataag ttctttacga acagaggtat tactgcatgc tatacaacca cggcagattc
6001 tagagcacac ggtgtcgctg aacgattaaa tcgtacttta ttaaacgatt gtcgcacact
6061 gcttcattgc agtggtctac caaatcatct atggttctca gcagtcgaat tttctactat
6121 aatcagaaat tcattagtct caccaaaaaa cgataaatcc gccgcaagac aacatgcagg
6181 tttagctgga ctggacatta ctactatact acctttcggt caaccggtta tagttaacaa
6241 ccataatccc gactcgaaaa tacatcctcg tggcattcca ggttacgcct tacatccgtc
6301 acgaaactct tatggctata ttatctatct tccatcatta aaaaagacag tagatactac
6361 caattacgtt atattacaag acaagcaatc caaattggac caattcaatt atgatacact
6421 cacctttgat gatgatctca atcgtttaac agcccataac caatctttta ttgaacaaaa
6481 tgaaacggag cagtcatatg atcaaaatac agaatctgat catgactatc aatcggagat
6541 tgaaataaac tctgatcctc tagtgaacga cttctcgtcc caatcaataa accctttaca
6601 attagacaag gaaccagtcc aaaaagtacg tgcaccaaaa gaagttgatg ccgacatatc
6661 tgaatacaat attcttccat ctcctgtacg atctcgtaca ccccatatca ttaataaaga
6721 gagtaccgaa atgggtggta ccgttgaatc agatactact tcacctagac actcgtctac
6781 cttcactgca cgaaaccaaa agcgacctgg tagtcccaat gatatgattg atttgacctc
6841 acaggataga gttaattatg gacttgaaaa catcaaaact acacgtttgg gtggtacgga
6901 ggaaccatat attcaacgaa atagtgatac aaatatcaaa tacaggacta caaatagtac
6961 gccctcaata gatgaccgtt cgtccaacag tgaatccact actcccatca tctccataga
7021 aacaaaggct gtatgtgata atacaccctc cattgatacg gatccgccag aatatcgatc
7081 ttctgaccat gcgactccta atataatgcc tgacaaatcc tcaaaaaatg ttacggctga
7141 ttctattctt gacgacctcc cacttcctga cttaacccat caatctccta cggacacttc
7201 tgatgtttca aaagatattc cacacataca ctctcgtcag actaattcca gtttgggtgg
7261 tatggatgat tctaatgttc tgactactac caaaagtaag aaaagatcat tagaagataa
7321 tgaaactgaa attgaggtat cccgagacac atggaataat aagaatatga gaagtctgga
7381 accaccaaga tcgaagaaac gcataaattt aattgcagca ataaaaggag tgaaatcgat
7441 caaaccagtt cgaacgacct taagatatga tgaagcaatt acttataata aagacaacaa
7501 agaaaaagac agatatgttg aagcttatca taaagaaatt agccaactat tgaaaatgaa
7561 cacttgggat acaaacaaat attatgatag aaatgacata gatcctaaaa aagtaataaa
7621 ctcaatgttt atatttaaca agaaacgtga tggtacacac aaagctagat ttgttgcaag
7681 aggcgacatt caacaccccg atacatatga ttctgatatg caatccaata ccgtacatca
7741 ctatgcactg atgacgtcac tgtcaatcgc attagacaac gactattata tcacacagct
7801 ggacatatcc tctgcttact tatatgctga tatcaaagaa gaattataca taagacctcc
7861 accacattta ggtttgaatg ataaattact acgtttgaga aaatcactct atggtttgaa
7921 acaaagtggt gcaaactggt atgaaaccat taaatcatat ttaataaatt gttgcgacat
7981 gcaagaagtt cgcggatggt catgcgtatt taagaatagt caagtaacaa tttgcttatt
8041 cgttgatgat atgatattat tcagcaaaga cttaaatgca aataagaaaa tcataacaac
8101 actcaagaaa caatacgata caaagataat aaatctgggt gaaagtgata acgaaattca
8161 gtacgacata cttggattag agatcaaata tcaaagaagc aagtacatga aattaggtat
8221 ggaaaaatcc ttgacagaaa aattacccaa actaaacgta cctttgaacc caaaaggaaa
8281 gaaacttaga gctccaggtc aaccaggtca ttatatagac caggatgaac tagaaataga
8341 tgaagatgaa tacaaagaga aagtacatga aatgcaaaag ttgattggtc tagcttcata
8401 tgttggatat aaatttagat ttgacttact atactacatc aacacattgc tcaaccatat
8461 actattcccc tctaggcaag ttttagacat gacatatgag ttaatacaat tcatgtggga
8521 cactagagat aaacaattaa tatggcacaa aaacaaacct accaagccag ataataaact
8581 agtcgcaata agcgatgctt catatggtaa ccaaccatat tacaagtcac aaattggtaa
8641 cattttccta ctcaacggaa aagtgattgg aggaaagtcg acaaaggctt cgttaacatg
8701 cacttcaact acagaagcag aaatacacgc ggtcagtgaa gctattccgc tattgaataa
8761 cctcagtcac cttgtgcaag aacttaacaa gaaaccaatt attaaaggct tacttactga
8821 tagtagatca acgatcagta taattaagtc tacaaatgaa gagaaattta gaaacagatt
8881 ttttggcaca aaggcaatga gacttagaga tgaagtatca ggtaataatt tatacgtata
8941 ctacatcgag accaagaaga acattgctga tgtgatgaca aaacctcttc cgataaaaac
9001 atttaaacta ttaactaaca aatggattca ttagatctat tacattatgg gtggtatgtt
9061 ggaataaaaa tcaactatca tctactaact agtatttacg ttactagtat attatcatat
9121 acggtgttag aagatgacgc aaatgatgag aaatagtcat ctaaattagt ggaagctgaa
9181 acgcaaggat tgataatgta ataggatcaa tgaatattaa catataaaat gatgataata
9241 atatttatag aattgtgtag aattgcagat tcccttttat ggattcctaa atcctcgagg
9301 agaacttcta gtatatctac atacctaata ttattgcctt attaaaaatg gaatcccaac
9361 aattacatca aaatccacat tctcttcaaa atcaattgtc ctgtacttcc ttgttcatgt
9421 gtgttcaaaa acgttatatt tataggataa ttatactcta tttctcaaca agtaattggt
9481 tgtttggccg agcggtctaa ggcgcctgat tcaagaaata tcttgaccgc agttaactgt
9541 gggaatactc aggtatcgta agatgcaaga gttcgaatct cttagcaacc attatttttt
9601 tcctcaacat aacgagaaca cacaggggcg ctatcgcaca gaatcaaatt cgatgactgg
9661 aaattttttg ttaatttcag aggtcgcctg acgcatatac ctttttcaac tgaaaaattg
9721 ggagaaaaag gaaaggtgag agccgcggaa ccggcttttc atatagaata gagaagcgtt
9781 catgactaaa tgcttgcatc acaatacttg aagttgacaa tattatttaa ggacctattg
9841 ttttttccaa taggtggtta gcaatcgtct tactttctaa cttttcttac cttttacatt
9901 tcagcaatat atatatatat atttcaagga tataccattc taatgtctgc ccctaagaag
9961 atcgtcgttt tgccaggtga ccacgttggt caagaaatca cagccgaagc cattaaggtt
10021 cttaaagcta tttctgatgt tcgttccaat gtcaagttcg atttcgaaaa tcatttaatt
10081 ggtggtgctg ctatcgatgc tacaggtgtc ccacttccag atgaggcgct ggaagcctcc
10141 aagaaggttg atgccgtttt gttaggtgct gtgggtggtc ctaaatgggg taccggtagt
10201 gttagacctg aacaaggttt actaaaaatc cgtaaagaac ttcaattgta cgccaactta
10261 agaccatgta actttgcatc cgactctctt ttagacttat ctccaatcaa gccacaattt
10321 gctaaaggta ctgacttcgt tgttgtcaga gaattagtgg gaggtattta ctttggtaag
10381 agaaaggaag acgatggtga tggtgtcgct tgggatagtg aacaatacac cgttccagaa
10441 gtgcaaagaa tcacaagaat ggccgctttc atggccctac aacatgagcc accattgcct
10501 atttggtcct tggataaagc taatgttttg gcctcttcaa gattatggag aaaaactgtg
10561 gaggaaacca tcaagaacga attccctaca ttgaaggttc aacatcaatt gattgattct
10621 gccgccatga tcctagttaa gaacccaacc cacctaaatg gtattataat caccagcaac
10681 atgtttggtg atatcatctc cgatgaagcc tccgttatcc caggttcctt gggtttgttg
10741 ccatctgcgt ccttggcctc tttgccagac aagaacaccg catttggttt gtacgaacca
10801 tgccacggtt ctgctccaga tttgccaaag aataaggtca accctatcgc cactatcttg
10861 tctgctgcaa tgatgttgaa attgtcattg aacttgcctg aagaaggtaa ggccattgaa
10921 gatgcagtta aaaaggtttt ggatgcaggt atcagaactg gtgatttagg tggttccaac
10981 agtaccacgg aagtcggtga tgctgtcgcc gaagaagtta agaaaatcct tgcttaaaaa
11041 gattctcttt ttttatgata tttgtacata aactttataa atgaaattca taatagaaac
11101 gacacgaaat tacaaaatgg aatatgttca tagggtagac gaaactatat acgcaatcta
11161 catacattta tcaagaagga gaaaaaggag gatgtaaagg aatacaggta agcaaattga
//