GenBank-Updates@genbank.bio.net (05/09/91)
LOCUS HAECOL3A3 1309 bp ds-DNA INV 09-MAY-1991 DEFINITION H.contortus 3A3 collagen gene, complete cds. ACCESSION M32820 J04671 KEYWORDS collagen; cuticle protein. SOURCE H.contortus (isolate BPL1), ensheathed third stage larva (SL3) DNA, clone lambda 3a3. ORGANISM Haemonchus contortus Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria; Spirurida; Spirurina; Filarioidea; Filariidae. REFERENCE 1 (bases 1 to 1309) AUTHORS Shamansky,L.M., Pratt,D., Boisvenue,R.J. and Cox,G.N. TITLE Cuticle collagen genes of Haemonchus contortus and Caenorhabditis elegans are highly conserved JOURNAL Mol. Biochem. Parasitol. 37, 73-86 (1989) STANDARD full staff_review COMMENT Draft entry and computer readable copy of sequence [Mol. Biochem. Parasitol. 37, 73-86 (1989)] kindly provided by G.Cox, (06-02-89). FEATURES Location/Qualifiers prim_transcript <175..1216 /note="3A3 collagen mRNA and introns" CDS join(175..339,397..946,1006..1178) /note="3A3 collagen" /codon_start=175 misc_signal 129..136 /note="TATA box" exon 175..339 /note="3A3 collagen, exon 1" intron 340..396 /note="3A3 collagen intron A" exon 397..946 /note="3A3 collagen, exon 2" intron 947..1005 /note="3A3 collagen intron B" exon 1006..1178 /note="3A3 collagen, exon 3" misc_signal 1199..1204 /note="polyA signal" misc_signal 1246..1251 /note="polyA signal" BASE COUNT 321 a 311 c 377 g 300 t ORIGIN 1 aagctttcag tcgtcctagg agctattcca cagtcagttc taaactctgt ctgttttttt 61 ctgcgctaag attggggctg gaggcgagac gctaagaatg cgctacacgg tacgctcttg 121 cctgcagcta tataaaggta gccggctaat ctggctggtg ttgcgcgtcg gcgaatggac 181 gtaatcgacc atcgcatcaa ggcctatcgg tttgtcgcct atgctgctgt gggattctcg 241 gtggtagctg tgctgtcggt ctgcgttacc ctaccgatcg tctacaacta tgtgcattat 301 gtgagaaagt cattacataa ggaggcatcc ttgtgcaagg taagatcctc caccatttaa 361 ggttgctttc cactcactct actgggtacg tttcagatct cgactaactc cgtctgggat 421 gacgtgacag ttttgaggct ggctcatttc ggtaacagga cagcacgtca agcaataacg 481 agctctgaag agaacggagg atgtgaatcg tgctgtcgac cgggaccgcc tggtcctcct 541 ggtccaccgg gaagaccggg aaggccgggc cgcccaggtg cacctggtct acctggggtt 601 cctggtttac cgcctccaga tggcagttgt gaacctgtct cgataccacc atgtgcagaa 661 tgtccagcag gaccacccgg tccacctgga aaaccgggtc ctccagggga cccaggagag 721 gatggtcagc ctgggccacc tggtcaagat ggtattccag gccagcaagg aaccaaaggc 781 ccaccaggtc caccaggaat accaggaaag ccaggcgaat caggagaggt tggtgaagat 841 gctgaatgtg aacctgttgc tcccggtgat caaggtccac ccggagaacc aggaccagaa 901 ggacctccag gggaacccgg cctgcaggga cctgtcggaa tgccaggtat ttgactaaca 961 gtatatagag gtatcctttc agaaagaggt gtagtgtaat ttcaggccaa gtgggtcaaa 1021 aaggagaaag cggaagtgat ggtcaactgg acttcgatgg cagccccgga cgtcctggtc 1081 ctcctggtcc tcctgggcga ccaggcgagc caggaatttg cccgaagtat tgtgctattg 1141 atggagggat tttcttcgaa gatggaactc gtcgttaaaa ttcaaaggaa cgctgtacaa 1201 taaataatta attaccagtt gaccattttc gagatctgtg ctgtgaataa aggtggtgta 1261 aggatggaaa agcgagtaaa agtggtgtaa ggatggaaaa atcggatcc //