GenBank-Updates@genbank.bio.net (05/09/91)
LOCUS HAECOL3A3 1309 bp ds-DNA INV 09-MAY-1991
DEFINITION H.contortus 3A3 collagen gene, complete cds.
ACCESSION M32820 J04671
KEYWORDS collagen; cuticle protein.
SOURCE H.contortus (isolate BPL1), ensheathed third stage larva (SL3) DNA,
clone lambda 3a3.
ORGANISM Haemonchus contortus
Eukaryota; Animalia; Metazoa; Nemata; Secernentea; Spiruria;
Spirurida; Spirurina; Filarioidea; Filariidae.
REFERENCE 1 (bases 1 to 1309)
AUTHORS Shamansky,L.M., Pratt,D., Boisvenue,R.J. and Cox,G.N.
TITLE Cuticle collagen genes of Haemonchus contortus and Caenorhabditis
elegans are highly conserved
JOURNAL Mol. Biochem. Parasitol. 37, 73-86 (1989)
STANDARD full staff_review
COMMENT Draft entry and computer readable copy of sequence [Mol. Biochem.
Parasitol. 37, 73-86 (1989)] kindly
provided by G.Cox, (06-02-89).
FEATURES Location/Qualifiers
prim_transcript <175..1216
/note="3A3 collagen mRNA and introns"
CDS join(175..339,397..946,1006..1178)
/note="3A3 collagen"
/codon_start=175
misc_signal 129..136
/note="TATA box"
exon 175..339
/note="3A3 collagen, exon 1"
intron 340..396
/note="3A3 collagen intron A"
exon 397..946
/note="3A3 collagen, exon 2"
intron 947..1005
/note="3A3 collagen intron B"
exon 1006..1178
/note="3A3 collagen, exon 3"
misc_signal 1199..1204
/note="polyA signal"
misc_signal 1246..1251
/note="polyA signal"
BASE COUNT 321 a 311 c 377 g 300 t
ORIGIN
1 aagctttcag tcgtcctagg agctattcca cagtcagttc taaactctgt ctgttttttt
61 ctgcgctaag attggggctg gaggcgagac gctaagaatg cgctacacgg tacgctcttg
121 cctgcagcta tataaaggta gccggctaat ctggctggtg ttgcgcgtcg gcgaatggac
181 gtaatcgacc atcgcatcaa ggcctatcgg tttgtcgcct atgctgctgt gggattctcg
241 gtggtagctg tgctgtcggt ctgcgttacc ctaccgatcg tctacaacta tgtgcattat
301 gtgagaaagt cattacataa ggaggcatcc ttgtgcaagg taagatcctc caccatttaa
361 ggttgctttc cactcactct actgggtacg tttcagatct cgactaactc cgtctgggat
421 gacgtgacag ttttgaggct ggctcatttc ggtaacagga cagcacgtca agcaataacg
481 agctctgaag agaacggagg atgtgaatcg tgctgtcgac cgggaccgcc tggtcctcct
541 ggtccaccgg gaagaccggg aaggccgggc cgcccaggtg cacctggtct acctggggtt
601 cctggtttac cgcctccaga tggcagttgt gaacctgtct cgataccacc atgtgcagaa
661 tgtccagcag gaccacccgg tccacctgga aaaccgggtc ctccagggga cccaggagag
721 gatggtcagc ctgggccacc tggtcaagat ggtattccag gccagcaagg aaccaaaggc
781 ccaccaggtc caccaggaat accaggaaag ccaggcgaat caggagaggt tggtgaagat
841 gctgaatgtg aacctgttgc tcccggtgat caaggtccac ccggagaacc aggaccagaa
901 ggacctccag gggaacccgg cctgcaggga cctgtcggaa tgccaggtat ttgactaaca
961 gtatatagag gtatcctttc agaaagaggt gtagtgtaat ttcaggccaa gtgggtcaaa
1021 aaggagaaag cggaagtgat ggtcaactgg acttcgatgg cagccccgga cgtcctggtc
1081 ctcctggtcc tcctgggcga ccaggcgagc caggaatttg cccgaagtat tgtgctattg
1141 atggagggat tttcttcgaa gatggaactc gtcgttaaaa ttcaaaggaa cgctgtacaa
1201 taaataatta attaccagtt gaccattttc gagatctgtg ctgtgaataa aggtggtgta
1261 aggatggaaa agcgagtaaa agtggtgtaa ggatggaaaa atcggatcc
//