GenBank-Updates@genbank.bio.net (01/25/91)
LOCUS SPYRRGQ 2158 bp ds-DNA BCT 25-JAN-1991
DEFINITION S.marinus 23S rRNA gene, introns.
ACCESSION M38363
KEYWORDS 23S ribosomal RNA.
SOURCE Staphylothermus marinus DNA.
ORGANISM Staphylothermus marinus
Prokaryota; Bacteria; Mendosicutes; Archaeobacteria;
Thermoproteales; Desulfurococcaceae.
REFERENCE 1 (bases 1 to 2158)
AUTHORS Kjems,J. and Garrett,R.A.
TITLE New ribosomal RNA introns in archaea and evidence for RNA
conformational changes associated with splicing
JOURNAL Proc. Natl. Acad. Sci. U.S.A. (1990) In press
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [Proc. Natl. Acad.
Sci. U.S.A. (1990) In press] kindly submitted
by R.A.Garrett, 07-SEP-1990.
FEATURES Location/Qualifiers
rRNA join(<1..681,738..1411,
1466..>2158)
/partial
/product="23s rRNA"
intron 682..737
intron 1412..1465
BASE COUNT 447 a 645 c 727 g 339 t
ORIGIN
1 ggatcccggc ggcagtagca gcgaagaggg gtggaaatcc cctccgccgg aaagggccag
61 ggttcctcgg caacggtcgt cggccgaggg ttagccggcc ctaacccggg ccgtaacacg
121 gacccgggga aggggaaacg ggttaatatt cccgtgccgc gggggtagac gcggcaacgc
181 aagcccggcc tccgacgcct ccggataggc ggaccggggg cacccgaatg ggtgcgaccc
241 ggctaaccgg tgaaggccct ggagaaccgt aatggtgaga aggggccgaa gccgggaatg
301 ggaccccgta tggggtcttc cgctgactcc gggggcccat gaaaaggggg ccgggaacga
361 tcccccgcgt ccgtaccgag aaccgacaca ggtgcccctg ggtgagtagc cccaggcgtc
421 tgggggataa cccgggccag ggaactcggc aaattggccc cgtaacttcg ggagaagggg
481 tgcccgcggt ctggaggcaa aaaccctctg gaccgcgggt cgcagtgcct aggggggcct
541 gactgtttaa taaaaacata ggtccccgca agcccgaaag ggtgtgtacg ggggctgaat
601 cctggccact ggcggtccgt gaaaccgggg tacaacccgg cgaagcgccg ctgaaggccg
661 ggagtaactc tgactctctt aacgggagaa tcccgttgac ccatatatat gctgggcaac
721 gggacctccc gggagaaagg tagccaaatg ccttgccggg tgagttccgg cgcgcatgaa
781 tggatcaacg aggtccccac tgtcctggcc cggggccccg cgaatacacg gagccggtgc
841 acaggccggc aaccccccgc agggcgataa gaccccgtgg agcttcaccg cagcctggcg
901 ttggcctccg ggctgcggcg cgtagcgtag gtgggagcca gtgaacccgc ccctccgggg
961 gcgggggagg cgccaatgaa acaccaccca ccgcagcccg gaggccttac ccccggggag
1021 atcccggggg gacagcgtca ggtgggcggt ttggctgggg cggcacgccc gcgaaaaggt
1081 aacacgggcg cccaaaggtc ggctcaggcg ggtcagagct ccgccgtaga gtgcaagggc
1141 aaaagccggc ttgaccggac cccggaacac aacgggtccg gccgggaaac cgcggcctag
1201 cgaacgctcg tgcccccctc ggtgggggcc gggcatgaca gaaaagttac cccggggata
1261 acagagtcgt cgcgggcgag agctcccatc gaccccgcgg tttgctacat cgatgtcggc
1321 tcttcccatc ctgggagtgc agcagctccc aagggtgggg ctgcccgccc attaaagggg
1381 aacgtgagct gggtttagac cgtcgtgaga cagcagggac tggggtcggg gaaattaaaa
1441 accccgaccc cacccctgcc tcaaaaggtc ggactctacc cgcggggggt gtgggccgcc
1501 tgaggggaag gtgccctcag tacgagagga acggggcgcc gcggccaatg gtgtaccggt
1561 tgtccggcag ggcatagccg ggcacgccag ccgtaggggg taaccgctga aagcatctaa
1621 gcgggaaccc ctccccgaaa agaggcggcc gtccgccgaa ggggtttcct cttcggcggg
1681 tagggctccc gtagaagacg gggttgatgg ggcgggggtg taagccccga gggagcattg
1741 tctcccaagg ggtttagccc gccgctccca aaagcccgac gccgcaggct taactcaccc
1801 ggggacgagc cgggcaataa atgattgcat tgcccgggac attgaggcgg agccccttga
1861 cccggttcga gtgtaaactc ctataatggg ggagcagggt ttctgggcta cctatccatg
1921 gcgcgcatcg cttaggaata tatgtataaa tatgtgttct ccttatgtag aaacttatgt
1981 gttcagaatt atctttccct tctcagccca gaatctatat caacaatcca tccgcgaaca
2041 gctccattgt tcaaagcatt actcaacact ctcctagcag tttctcgatc ccttgtgaga
2101 gctattagtg aaccccccaa tcctgctcca gagatcttgg ctcctaaagc accagctg
//GenBank-Updates@genbank.bio.net (05/10/91)
LOCUS SPYRRGQ 2158 bp ds-DNA BCT 10-MAY-1991
DEFINITION S.marinus 23S rRNA gene, introns.
ACCESSION M38363
KEYWORDS 23S ribosomal RNA.
SOURCE Staphylothermus marinus DNA.
ORGANISM Staphylothermus marinus
Prokaryota; Bacteria; Mendosicutes; Archaeobacteria;
Thermoproteales; Desulfurococcaceae.
REFERENCE 1 (bases 1 to 2158)
AUTHORS Kjems,J. and Garrett,R.A.
TITLE Ribosomal RNA introns in archaea and evidence for RNA
conformational changes associated with splicing
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 88, 439-443 (1991)
STANDARD simple staff_entry
COMMENT Draft entry and computer-readable sequence for [Proc. Natl. Acad.
Sci. U.S.A. (1990) In press] kindly submitted
by R.A.Garrett, 07-SEP-1990.
FEATURES Location/Qualifiers
rRNA join(<1..681,738..1411,1466..>2158)
/product="23S ribosomal RNA"
/partial
intron 682..737
intron 1412..1465
BASE COUNT 447 a 645 c 727 g 339 t
ORIGIN
1 ggatcccggc ggcagtagca gcgaagaggg gtggaaatcc cctccgccgg aaagggccag
61 ggttcctcgg caacggtcgt cggccgaggg ttagccggcc ctaacccggg ccgtaacacg
121 gacccgggga aggggaaacg ggttaatatt cccgtgccgc gggggtagac gcggcaacgc
181 aagcccggcc tccgacgcct ccggataggc ggaccggggg cacccgaatg ggtgcgaccc
241 ggctaaccgg tgaaggccct ggagaaccgt aatggtgaga aggggccgaa gccgggaatg
301 ggaccccgta tggggtcttc cgctgactcc gggggcccat gaaaaggggg ccgggaacga
361 tcccccgcgt ccgtaccgag aaccgacaca ggtgcccctg ggtgagtagc cccaggcgtc
421 tgggggataa cccgggccag ggaactcggc aaattggccc cgtaacttcg ggagaagggg
481 tgcccgcggt ctggaggcaa aaaccctctg gaccgcgggt cgcagtgcct aggggggcct
541 gactgtttaa taaaaacata ggtccccgca agcccgaaag ggtgtgtacg ggggctgaat
601 cctggccact ggcggtccgt gaaaccgggg tacaacccgg cgaagcgccg ctgaaggccg
661 ggagtaactc tgactctctt aacgggagaa tcccgttgac ccatatatat gctgggcaac
721 gggacctccc gggagaaagg tagccaaatg ccttgccggg tgagttccgg cgcgcatgaa
781 tggatcaacg aggtccccac tgtcctggcc cggggccccg cgaatacacg gagccggtgc
841 acaggccggc aaccccccgc agggcgataa gaccccgtgg agcttcaccg cagcctggcg
901 ttggcctccg ggctgcggcg cgtagcgtag gtgggagcca gtgaacccgc ccctccgggg
961 gcgggggagg cgccaatgaa acaccaccca ccgcagcccg gaggccttac ccccggggag
1021 atcccggggg gacagcgtca ggtgggcggt ttggctgggg cggcacgccc gcgaaaaggt
1081 aacacgggcg cccaaaggtc ggctcaggcg ggtcagagct ccgccgtaga gtgcaagggc
1141 aaaagccggc ttgaccggac cccggaacac aacgggtccg gccgggaaac cgcggcctag
1201 cgaacgctcg tgcccccctc ggtgggggcc gggcatgaca gaaaagttac cccggggata
1261 acagagtcgt cgcgggcgag agctcccatc gaccccgcgg tttgctacat cgatgtcggc
1321 tcttcccatc ctgggagtgc agcagctccc aagggtgggg ctgcccgccc attaaagggg
1381 aacgtgagct gggtttagac cgtcgtgaga cagcagggac tggggtcggg gaaattaaaa
1441 accccgaccc cacccctgcc tcaaaaggtc ggactctacc cgcggggggt gtgggccgcc
1501 tgaggggaag gtgccctcag tacgagagga acggggcgcc gcggccaatg gtgtaccggt
1561 tgtccggcag ggcatagccg ggcacgccag ccgtaggggg taaccgctga aagcatctaa
1621 gcgggaaccc ctccccgaaa agaggcggcc gtccgccgaa ggggtttcct cttcggcggg
1681 tagggctccc gtagaagacg gggttgatgg ggcgggggtg taagccccga gggagcattg
1741 tctcccaagg ggtttagccc gccgctccca aaagcccgac gccgcaggct taactcaccc
1801 ggggacgagc cgggcaataa atgattgcat tgcccgggac attgaggcgg agccccttga
1861 cccggttcga gtgtaaactc ctataatggg ggagcagggt ttctgggcta cctatccatg
1921 gcgcgcatcg cttaggaata tatgtataaa tatgtgttct ccttatgtag aaacttatgt
1981 gttcagaatt atctttccct tctcagccca gaatctatat caacaatcca tccgcgaaca
2041 gctccattgt tcaaagcatt actcaacact ctcctagcag tttctcgatc ccttgtgaga
2101 gctattagtg aaccccccaa tcctgctcca gagatcttgg ctcctaaagc accagctg
//