GenBank-Updates@genbank.bio.net (11/21/90)
LOCUS VCHIRGB 1100 bp ds-DNA BCT 21-NOV-1990 DEFINITION Vibrio cholerae iron-regulated virulence protein (irgB) gene, complete cds. ACCESSION M55988 KEYWORDS iron-regulated virulence protein. SOURCE Vibrio cholerae (strain 0395) DNA. ORGANISM Vibrio cholerae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Vibrionaceae. REFERENCE 1 (bases 1 to 1100) AUTHORS Goldberg,M.B., Boyko,S.A. and Calderwood,S.B. TITLE Positive transcriptional regulation of an iron-regulated virulence gene in Vibrio cholerae JOURNAL Unpublished (1990) STANDARD full staff_entry FEATURES from to/span description pept 169 1065 iron-regulated virulence protein (irgB) pept 24 < 1 (c) iron-regulated virulence protein (irgA) mRNA 60 < 1 (c) iron-regulated virulence protein (irgA) mRNA 55 1063 iron-regulated virulence protein (irgB) signal 1063 1092 transcription terminator signal 18 23 -35_signal signal 42 47 -10_signal binding 42 60 DNA homologous to E.coli Fur binding site binding 154 159 ribosome binding site BASE COUNT 283 a 272 c 259 g 286 t ORIGIN 1 gggggatgga ttgaatctgg acatttacca ctcctttaaa tgataattat tcttaatttc 61 agaagcggat tattcatata ttctgtactg gagatagatc gacacatgga atagttcggt 121 ccaaatatgg aacgtctgtg gtaattattc tttaagggtc aaatacctat gcaagatctc 181 agcgccgtaa aagctttcca tgcgctttgc caacataaga gcctgactgc cgctgccaaa 241 gcgcttgaac agcctaaatc caccctgagt cgccgtttgg cgcaacttga agaggacttg 301 ggacaaagct tgttgatgcg tcaaggcaac cgcttaacgc tcaccaaagc aggagaagtg 361 tttgcggttt actcggagca actacttgaa ctggccaata aaagtcagga agcgttgcaa 421 gaattgaaca atcaagtgac tggcgaactc acgctggtgg tacaccccaa tttgatccgc 481 ggctggctca gccaagtatt ggatgagttt atgcagcagc attcgacatt gaagatccgt 541 ctactcagcc agtttcaaca cagtgatgag gtgtttgagc ccgatttgat catttggatt 601 gaacacgccg cccccatggg ttatcgcaaa gaacgcttag gctattggcg ctatgccact 661 tacgcctctc ccaaatattt ggcccatcga gataaaccga cccatcctcg tgagctgatt 721 catcacccat ggattgattt tattgcttgt cggcgcgcgg agcttgaact gcaccatcca 781 gagttcggca gttattcact gccagcacta gagagtcgtt tacaaagcga taatcttgcc 841 atgcaagccg atgcgattgc taaaggtcgt ggtattggtt tgcttcccac ttggtttgcc 901 aatggttttg aaacggcgca tccgggcagc ctcattcctt gcgtcaacgg atggcaatca 961 cagccaacag aaatcaactg cttctatccg ctcggtcgtc acccacttcg gctgcgccta 1021 tttattgatg cgctccgcca agcaaggccc gatgagtggc aataaaaaat cccgccgcag 1081 cgggattttt tatcatcgat //
GenBank-Updates@genbank.bio.net (01/31/91)
LOCUS VCHIRGB 1100 bp ds-DNA BCT 31-JAN-1991 DEFINITION Vibrio cholerae iron-regulated virulence protein (irgB) gene, complete cds. ACCESSION M55988 KEYWORDS iron-regulated virulence protein. SOURCE Vibrio cholerae (strain 0395) DNA. ORGANISM Vibrio cholerae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Vibrionaceae. REFERENCE 1 (bases 1 to 1100) AUTHORS Goldberg,M.B., Boyko,S.A. and Calderwood,S.B. TITLE Positive transcriptional regulation of an iron-regulated virulence gene in Vibrio cholerae JOURNAL Unpublished (1990) STANDARD full staff_entry FEATURES Location/Qualifiers CDS complement(<1..24) /product="iron-regulated virulence protein" /gene="irgA" /codon_start=24 mRNA complement(<1..(60.61)) /product="iron-regulated virulence protein" /gene="irgA" -35_signal 18..23 /gene="irgB" -10_signal 42..47 /gene="irgB" protein_bind 42..60 /note="homologous to E.coli Fur binding site" mRNA (54.55)..1063 /product="iron-regulated virulence protein" /gene="irgB" RBS 154..159 /gene="irgB" CDS 169..1065 /product="iron-regulated virulence protein" /gene="irgB" /codon_start=169 terminator 1063..1092 /gene="irgB" BASE COUNT 283 a 272 c 259 g 286 t ORIGIN 1 gggggatgga ttgaatctgg acatttacca ctcctttaaa tgataattat tcttaatttc 61 agaagcggat tattcatata ttctgtactg gagatagatc gacacatgga atagttcggt 121 ccaaatatgg aacgtctgtg gtaattattc tttaagggtc aaatacctat gcaagatctc 181 agcgccgtaa aagctttcca tgcgctttgc caacataaga gcctgactgc cgctgccaaa 241 gcgcttgaac agcctaaatc caccctgagt cgccgtttgg cgcaacttga agaggacttg 301 ggacaaagct tgttgatgcg tcaaggcaac cgcttaacgc tcaccaaagc aggagaagtg 361 tttgcggttt actcggagca actacttgaa ctggccaata aaagtcagga agcgttgcaa 421 gaattgaaca atcaagtgac tggcgaactc acgctggtgg tacaccccaa tttgatccgc 481 ggctggctca gccaagtatt ggatgagttt atgcagcagc attcgacatt gaagatccgt 541 ctactcagcc agtttcaaca cagtgatgag gtgtttgagc ccgatttgat catttggatt 601 gaacacgccg cccccatggg ttatcgcaaa gaacgcttag gctattggcg ctatgccact 661 tacgcctctc ccaaatattt ggcccatcga gataaaccga cccatcctcg tgagctgatt 721 catcacccat ggattgattt tattgcttgt cggcgcgcgg agcttgaact gcaccatcca 781 gagttcggca gttattcact gccagcacta gagagtcgtt tacaaagcga taatcttgcc 841 atgcaagccg atgcgattgc taaaggtcgt ggtattggtt tgcttcccac ttggtttgcc 901 aatggttttg aaacggcgca tccgggcagc ctcattcctt gcgtcaacgg atggcaatca 961 cagccaacag aaatcaactg cttctatccg ctcggtcgtc acccacttcg gctgcgccta 1021 tttattgatg cgctccgcca agcaaggccc gatgagtggc aataaaaaat cccgccgcag 1081 cgggattttt tatcatcgat //
GenBank-Updates@genbank.bio.net (05/10/91)
LOCUS VIBIRGB 1100 bp ds-DNA BCT 10-MAY-1991 DEFINITION Vibrio cholerae iron-regulated virulence protein (irgB) gene, complete cds. ACCESSION M55988 KEYWORDS iron-regulated virulence protein. SOURCE Vibrio cholerae (strain 0395) DNA. ORGANISM Vibrio cholerae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Vibrionaceae. REFERENCE 1 (bases 1 to 1100) AUTHORS Goldberg,M.B., Boyko,S.A. and Calderwood,S.B. TITLE Positive transcriptional regulation of an iron-regulated virulence gene in Vibrio cholerae JOURNAL Proc. Natl. Acad. Sci. U.S.A. 88, 1125-1129 (1991) STANDARD full staff_entry FEATURES Location/Qualifiers mRNA complement(<1..(60.61)) /product="iron-regulated virulence protein" /gene="irgA" CDS complement(<1..24) /product="iron-regulated virulence protein" /gene="irgA" /codon_start=24 -35_signal 18..23 /gene="irgB" -10_signal 42..47 /gene="irgB" protein_bind 42..60 /note="homologous to E.coli Fur binding site" mRNA (54.55)..1063 /product="iron-regulated virulence protein" /gene="irgB" RBS 154..159 /gene="irgB" CDS 169..1065 /product="iron-regulated virulence protein" /gene="irgB" /codon_start=169 terminator 1063..1092 /gene="irgB" BASE COUNT 283 a 272 c 259 g 286 t ORIGIN 1 gggggatgga ttgaatctgg acatttacca ctcctttaaa tgataattat tcttaatttc 61 agaagcggat tattcatata ttctgtactg gagatagatc gacacatgga atagttcggt 121 ccaaatatgg aacgtctgtg gtaattattc tttaagggtc aaatacctat gcaagatctc 181 agcgccgtaa aagctttcca tgcgctttgc caacataaga gcctgactgc cgctgccaaa 241 gcgcttgaac agcctaaatc caccctgagt cgccgtttgg cgcaacttga agaggacttg 301 ggacaaagct tgttgatgcg tcaaggcaac cgcttaacgc tcaccaaagc aggagaagtg 361 tttgcggttt actcggagca actacttgaa ctggccaata aaagtcagga agcgttgcaa 421 gaattgaaca atcaagtgac tggcgaactc acgctggtgg tacaccccaa tttgatccgc 481 ggctggctca gccaagtatt ggatgagttt atgcagcagc attcgacatt gaagatccgt 541 ctactcagcc agtttcaaca cagtgatgag gtgtttgagc ccgatttgat catttggatt 601 gaacacgccg cccccatggg ttatcgcaaa gaacgcttag gctattggcg ctatgccact 661 tacgcctctc ccaaatattt ggcccatcga gataaaccga cccatcctcg tgagctgatt 721 catcacccat ggattgattt tattgcttgt cggcgcgcgg agcttgaact gcaccatcca 781 gagttcggca gttattcact gccagcacta gagagtcgtt tacaaagcga taatcttgcc 841 atgcaagccg atgcgattgc taaaggtcgt ggtattggtt tgcttcccac ttggtttgcc 901 aatggttttg aaacggcgca tccgggcagc ctcattcctt gcgtcaacgg atggcaatca 961 cagccaacag aaatcaactg cttctatccg ctcggtcgtc acccacttcg gctgcgccta 1021 tttattgatg cgctccgcca agcaaggccc gatgagtggc aataaaaaat cccgccgcag 1081 cgggattttt tatcatcgat //