GenBank-Updates@genbank.bio.net (03/07/91)
LOCUS PP2MUTS 1129 bp ds-DNA PHG 07-MAR-1991 DEFINITION Bacteriophage P2 capsid protein, complete cds. ACCESSION M59752 KEYWORDS capsid protein. SOURCE Bacteriophage P2 DNA. ORGANISM Bacteriophage P2 Viridae; ds-DNA nonenveloped viruses; Myoviridae. REFERENCE 1 (bases 1 to 1129) AUTHORS Six,E.W., Sunshine,M.G., Williams,J., Haggaard-Ljungquist,E. and Lindqvist,B.H. TITLE Morphopoietic switch mutations of bacteriophage P2 JOURNAL Unpublished (1990) STANDARD simple staff_entry FEATURES Location/Qualifiers CDS 31..1104 /product="capsid protein" /codon_start=31 BASE COUNT 287 a 310 c 304 g 228 t ORIGIN 1 cacgattaac ccttaatttc aggaaaaact atgcgccagg aaacccgctt taaatttaat 61 gcctacctgt cccgtgttgc cgaactgaac ggcatcgacg ccggtgatgt gtcgaaaaaa 121 ttcaccgttg aaccgtcggt cacccagacc ctgatgaaca ccatgcagga gtcctctgac 181 tttctgaccc gcatcaatat tgtgccggtc agcgaaatga aaggggaaaa aattggtatc 241 ggtgtcaccg gctccatcgc cagcactacc gacactgccg gtggtaccga gcgtcagccg 301 aaggacttct cgaagctggc gtcaaacaag tacgaatgcg accagattaa cttcgatttt 361 tatatccgct acaaaacgct ggacctgtgg gcgcgttatc aggatttcca gctccgtatc 421 cgtaacgcca ttatcaaacg ccagtccctt gatttcatca tggccggttt taacggcgtg 481 aagcgtgccg aaacctctga ccgcagcagc aatccgatgt tgcaggatgt ggcggtcggc 541 tggctgcaga aataccgcaa tgaagcaccg gcgcgcgtga tgagcaaggt cactgacgag 601 gaaggccgca ccacctctga ggttatccgc gtgggtaagg gcggtgatta tgccagcctt 661 gatgcactgg tgatggatgc gaccaacaac ctgattgaac cgtggtatca ggaagaccct 721 gaccttgtgg tgattgtggg gcgtcagcta ctggcggaca agtatttccc catcgtcaac 781 aaggagcagg acaacagcga aatgctggcc gctgacgtca tcatcagcca gaaacgcatc 841 ggtaacctac cagcggtacg cgtcccgtac ttcccggcgg atgcgatgct catcacgaag 901 ctggaaaacc tgtccatcta ctacatggat gacagccatc gccgcgtgat tgaggaaaac 961 ccgaaactcg accgcgtgga gaactacgag tcaatgaaca ttgattacgt ggtggaagac 1021 tacgccgccg gttgtctggt ggaaaaaatc aaggtcggtg acttctccac accggctaag 1081 gcgaccgcag agccgggagc gtaaccgatg acgagtcccg cacagcgcc //
GenBank-Updates@genbank.bio.net (03/08/91)
LOCUS PP2NCAP 1129 bp ds-DNA PHG 08-MAR-1991 DEFINITION Bacteriophage P2 capsid protein, complete cds. ACCESSION M59752 KEYWORDS capsid protein; gene N. SOURCE Bacteriophage P2 DNA. ORGANISM Bacteriophage P2 Viridae; ds-DNA nonenveloped viruses; Myoviridae. REFERENCE 1 (bases 1 to 1129) AUTHORS Six,E.W., Sunshine,M.G., Williams,J., Haggaard-Ljungquist,E. and Lindqvist,B.H. TITLE Morphopoietic switch mutations of bacteriophage P2 JOURNAL Virology (1991) In press STANDARD simple staff_entry COMMENT Nucl.# mutation change codon# change phenotype 300 am209 g -> a 90 P -> P silent 301 am209 a -> t 91 K -> - nonsense 581 sir3 t -> c 184 M -> T see below:* 646 sir5 g -> t 206 D -> Y " " * 646-648 sir9 gat -> --- 206 D -> - " " * 650 sir2,6,8 a -> t 207 Y -> F " " * 691 sir1 c -> g 221 L -> V " " * 692 sir4 t -> a 221 L -> Q " " * * : defective for choice of small capsids by satellite phage P4, sir9 : deletion of one codon, sir2,6,8 = sir2, sir6, sir8 (independent, identical mutations). FEATURES Location/Qualifiers CDS 31..1104 /product="capsid protein" /codon_start=31 BASE COUNT 287 a 310 c 304 g 228 t ORIGIN 1 cacgattaac ccttaatttc aggaaaaact atgcgccagg aaacccgctt taaatttaat 61 gcctacctgt cccgtgttgc cgaactgaac ggcatcgacg ccggtgatgt gtcgaaaaaa 121 ttcaccgttg aaccgtcggt cacccagacc ctgatgaaca ccatgcagga gtcctctgac 181 tttctgaccc gcatcaatat tgtgccggtc agcgaaatga aaggggaaaa aattggtatc 241 ggtgtcaccg gctccatcgc cagcactacc gacactgccg gtggtaccga gcgtcagccg 301 aaggacttct cgaagctggc gtcaaacaag tacgaatgcg accagattaa cttcgatttt 361 tatatccgct acaaaacgct ggacctgtgg gcgcgttatc aggatttcca gctccgtatc 421 cgtaacgcca ttatcaaacg ccagtccctt gatttcatca tggccggttt taacggcgtg 481 aagcgtgccg aaacctctga ccgcagcagc aatccgatgt tgcaggatgt ggcggtcggc 541 tggctgcaga aataccgcaa tgaagcaccg gcgcgcgtga tgagcaaggt cactgacgag 601 gaaggccgca ccacctctga ggttatccgc gtgggtaagg gcggtgatta tgccagcctt 661 gatgcactgg tgatggatgc gaccaacaac ctgattgaac cgtggtatca ggaagaccct 721 gaccttgtgg tgattgtggg gcgtcagcta ctggcggaca agtatttccc catcgtcaac 781 aaggagcagg acaacagcga aatgctggcc gctgacgtca tcatcagcca gaaacgcatc 841 ggtaacctac cagcggtacg cgtcccgtac ttcccggcgg atgcgatgct catcacgaag 901 ctggaaaacc tgtccatcta ctacatggat gacagccatc gccgcgtgat tgaggaaaac 961 ccgaaactcg accgcgtgga gaactacgag tcaatgaaca ttgattacgt ggtggaagac 1021 tacgccgccg gttgtctggt ggaaaaaatc aaggtcggtg acttctccac accggctaag 1081 gcgaccgcag agccgggagc gtaaccgatg acgagtcccg cacagcgcc //
GenBank-Updates@genbank.bio.net (05/10/91)
LOCUS PP2NCAP 1129 bp ds-DNA PHG 10-MAY-1991 DEFINITION Bacteriophage P2 capsid protein, complete cds. ACCESSION M59752 KEYWORDS capsid protein; gene N. SOURCE Bacteriophage P2 DNA. ORGANISM Bacteriophage P2 Viridae; ds-DNA nonenveloped viruses; Myoviridae. REFERENCE 1 (bases 1 to 1129) AUTHORS Six,E.W., Sunshine,M.G., Williams,J., Haggard-Ljungquist,E. and Lindqvist,B.H. TITLE morphopoietic jswitch mutations of bacteriophage p2 JOURNAL Virology 182, 34-46 (1991) STANDARD simple staff_entry COMMENT Nucl.# mutation change codon# change phenotype 300 am209 g -> a 90 P -> P silent 301 am209 a -> t 91 K -> - nonsense 581 sir3 t -> c 184 M -> T see below:* 646 sir5 g -> t 206 D -> Y " " * 646-648 sir9 gat -> --- 206 D -> - " " * 650 sir2,6,8 a -> t 207 Y -> F " " * 691 sir1 c -> g 221 L -> V " " * 692 sir4 t -> a 221 L -> Q " " * * : defective for choice of small capsids by satellite phage P4, sir9 : deletion of one codon, sir2,6,8 = sir2, sir6, sir8 (independent, identical mutations). FEATURES Location/Qualifiers CDS 31..1104 /product="capsid protein" /codon_start=31 BASE COUNT 287 a 310 c 304 g 228 t ORIGIN 1 cacgattaac ccttaatttc aggaaaaact atgcgccagg aaacccgctt taaatttaat 61 gcctacctgt cccgtgttgc cgaactgaac ggcatcgacg ccggtgatgt gtcgaaaaaa 121 ttcaccgttg aaccgtcggt cacccagacc ctgatgaaca ccatgcagga gtcctctgac 181 tttctgaccc gcatcaatat tgtgccggtc agcgaaatga aaggggaaaa aattggtatc 241 ggtgtcaccg gctccatcgc cagcactacc gacactgccg gtggtaccga gcgtcagccg 301 aaggacttct cgaagctggc gtcaaacaag tacgaatgcg accagattaa cttcgatttt 361 tatatccgct acaaaacgct ggacctgtgg gcgcgttatc aggatttcca gctccgtatc 421 cgtaacgcca ttatcaaacg ccagtccctt gatttcatca tggccggttt taacggcgtg 481 aagcgtgccg aaacctctga ccgcagcagc aatccgatgt tgcaggatgt ggcggtcggc 541 tggctgcaga aataccgcaa tgaagcaccg gcgcgcgtga tgagcaaggt cactgacgag 601 gaaggccgca ccacctctga ggttatccgc gtgggtaagg gcggtgatta tgccagcctt 661 gatgcactgg tgatggatgc gaccaacaac ctgattgaac cgtggtatca ggaagaccct 721 gaccttgtgg tgattgtggg gcgtcagcta ctggcggaca agtatttccc catcgtcaac 781 aaggagcagg acaacagcga aatgctggcc gctgacgtca tcatcagcca gaaacgcatc 841 ggtaacctac cagcggtacg cgtcccgtac ttcccggcgg atgcgatgct catcacgaag 901 ctggaaaacc tgtccatcta ctacatggat gacagccatc gccgcgtgat tgaggaaaac 961 ccgaaactcg accgcgtgga gaactacgag tcaatgaaca ttgattacgt ggtggaagac 1021 tacgccgccg gttgtctggt ggaaaaaatc aaggtcggtg acttctccac accggctaag 1081 gcgaccgcag agccgggagc gtaaccgatg acgagtcccg cacagcgcc //