GenBank-Updates@genbank.bio.net (05/11/91)
LOCUS PVBREG 270 bp ds-DNA VRL 11-MAY-1991
DEFINITION Papovavirus BKV archetypical regulatory region.
ACCESSION M64605
KEYWORDS consensus sequence; origin of replication.
SOURCE Papovavirus BKV DNA.
ORGANISM Papovavirus BKV
Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
Papillomavirus.
REFERENCE 1 (bases 1 to 270)
AUTHORS Negrini,M., Sabbioni,S., Arthur,R.R., Castagnoli,A. and
Barbanti-Brodano,G.
TITLE Identification of the archetypal regulatory region of the human
papovavirus BK: Structure and sequence
JOURNAL Unpublished (1991)
STANDARD full staff_entry
COMMENT This sequence represents a consensus sequence of thirteen different
isolates from the urine of bone marrow transplant recipients.
FEATURES Location/Qualifiers
rep_origin <1..11
misc_feature 12..31
/note="AT-rich region"
enhancer 35..102
enhancer 103..141
enhancer 142..204
5'UTR 205..267
/note="late leader sequence"
CDS 268..>270
/gene="agnogene"
/codon_start=268
BASE COUNT 90 a 64 c 68 g 48 t
ORIGIN
1 gcctcggcct cttatatatt ataaaaaaaa aggccacagg gaggagctgc ttacccatgg
61 aatgcagcca aaccatgacc tcaggaagga aagtgcatga ctgggcagcc agccagtggc
121 agttaatagt gaaaccccgc ccctaaaatt ctcaaataaa cacaagagga agtggaaact
181 ggccaaagga gtggaaagca gccagacaga catgttttgc gagcctagga atcttggcct
241 tgtccccagt taaactggac aaaggccatg
//