GenBank-Updates@genbank.bio.net (05/14/91)
LOCUS HEITRANS 9100 bp ds-DNA VRL 14-MAY-1991 DEFINITION Haemophilus influenzae transformtion gene cluster DNA. ACCESSION M62809 KEYWORDS transformation. SOURCE Haemophilus influenzae Rd DNA. ORGANISM Haemophilus influenzae Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Pasteurellaceae. REFERENCE 1 (bases 1 to 9100) AUTHORS Tomb,J.-F., El-Hajj,H. and Smith,H.O. TITLE Nucleotide sequence of a cluster of genes involved in the transformation of Haemophilus influenzae Rd JOURNAL Gene (1991) In press STANDARD full staff_review FEATURES Location/Qualifiers CDS complement(135..980) /number=3 /note="The predicted molecular weight and pI of ORF J are 32.2 Kd and 8.96 respectively" /note="ORF J" /codon_start=980 /citation=Gene ??, ??-?? (1991) CDS complement(1068..3662) /number=3 /function="Possibly involved in the elongation of the murein sacculus." /note="An insertion in ORF I causes a modest deficiency in transformation. ORF I is 51.8 % identical to the penicillin-binding protein 1A of E.coli. The predicted MW and pI of ORF I are 95.4 KD and 7.1" /note="ORF I" /codon_start=3662 /citation=Gene ??, ??-?? (1991) CDS 3761..4558 /number=1 /note="A Haemophilus strain carrying a mini-Tn10kan insertion in ORF A is deficient in transformation. The predicted molecular weight and pI of ORF A are 31.5 Kd and 6.0 respectively" /note="ORF A" /codon_start=3761 /citation=Gene ??, ??-?? (1991) CDS 4559..5065 /number=2 /note="The predicted molecular weight and pI of ORF B are 19.7 Kd and 9.0 respectively" /note="ORF B" /codon_start=4559 /citation=Gene ??, ??-?? (1991) CDS 5062..5583 /number=3 /note="A Haemophilus strain carrying a mini-Tn10kan insertion in ORF C causes a deficiency in transformation. The predicted molecular weight and pI of ORF C are 19.9 Kd and 10.2 respectively" /note="ORF C" /codon_start=5062 /citation=Gene ??, ??-?? (1991) CDS 5580..5993 /number=4 /note="The predicted molecular weight and pI of ORF D are 15.6Kd and 4.6 respectively" /note="ORF D" /codon_start=5580 /citation=Gene ??, ??-?? (1991) CDS 6003..7328 /number=5 /note="A mini-Tn10kan insertion in ORF E causes a deficiency in transformation. ORF E is 24% identical to the products of the filamentous phage gene IV and of pulD, a gene in the pulC operon of Klebsiella" /note="ORF" /codon_start=6003 /citation=Gene ??, ??-?? (1991) CDS complement(6494..6883) /number=1 /note="A Haemophilus strain carrying an insertion in ORF H is deficient in transformation. The predicted molecular weight and pI of ORF H are 15.6 Kd and 12.2 respectively" /note="ORF H" /codon_start=6883 /citation=Gene ??, ??-?? (1991) CDS 7350..8039 /number=6 /note="A Haemophilus strain carrying an insertion in ORF F is deficient in transformation, but is still able to bind and take up DNA. The predicted molecular weight and pI of ORF F are 26.8 Kd and 10.6" /note="ORF F" /codon_start=7350 /citation=Gene ??, ??-?? (1991) CDS 8115..8711 /number=7 /note="The predicted molecular weight and pI of ORF G are 21.8 Kd and 4.3 respectively" /note="ORF G" /codon_start=8115 /citation=Gene ??, ??-?? (1991) BASE COUNT 2751 a 1669 c 1823 g 2857 t ORIGIN 1 gtcaaaaatt gcgtgcattc tagcgaaaaa atgggctttt gggaactgtg ggatttattt 61 aaaatcttag aaaatcttac cgcactttta agctataaag tgcggtgaaa tttagtggcg 121 tttataatgg agaattactc tggtgtaatc cattcgactg tccagcttcc agtaccttct 181 ggaactaatg tttttgtgag ataaggcaaa atttctttca tttgggtttc taatgtccaa 241 ggtggattaa ttaccaccat accgctcgca gtcattcctc gttgatcgct atctgggcga 301 acggcgagtt caatttttag aatttttcta attcccgttg cttctaaacc cttaaaaata 361 cgtttagttt gttggcgtaa tacaacagga taccaaatcg cataagtgcc agtggcaaaa 421 cgtttatagc cctcttcaat ggctttaaca acgagatcat aatcatcttt taattcataa 481 ggcggatcga tgagtactaa gcctcggcgt tcttttggcg gaagcgttgc tttgacttgt 541 tgaaagccat tgtcacattt tacggtgaca tttttgtcgt cgctaaaatt attgcgaaga 601 attggataat cgctaggatg aagctcggtc aatagtgcgc gatcttgtga gcgcaacaat 661 tccgcggcaa ttaatggaga acccgcgtaa taacgtagtt ctttgccacc ataattgagt 721 tttttgatca tttttacata acgagcaata tcttcgggta aatctgtttg atcccacagg 781 cgtccaatac cttctttata ttcccccgtt ttttctgatt catttgagga taaacgataa 841 cgccccacac cagagtgcgt atccaaataa aaaaagcctt tttctttgag tttaagattt 901 tccaaaatga gcattaaaac aatatgtttc aagacatcgg catgattgcc agcgtgaaat 961 gagtgatgat aactcagcat aatatattcc ttatatattc cttatttgtt taataacgaa 1021 ggcgagccaa ttgactcgcc cgattacaca ctaaagtgcg gtcattttta gaagagttct 1081 tgtggttgcg tcgctggcgt attgccttca ttatttaagc gttgctgtaa ctcagtagga 1141 acataataac cacgctcttg catttccgaa agataggtac gtgtcggttc tgttcccgca 1201 ataaaatatt ctttgcgccc accgtttgga gaaagcaaac ctgtcaaagt atcaatgttt 1261 ttttccacaa tttttggcgg tagcgacaat ttacgttctg gcttatcact caaagccgtt 1321 ttcatataag tgatccaagc aggcattgct gtttttgctc ctgcttctcc acgcccaagt 1381 actcgtttgt tatcatcaaa cccgacataa gttgtggtta ctaagtttgc accaaatccc 1441 gcataccaag ccacttttga actgttggta gtacctgttt taccgcctat atcgctacgt 1501 ttaatgcttt gtgcaatacg ccagctggtg cctttccagt ctaaaccttg ttcgccataa 1561 attgccgtat ttaaggcact acgaatgaga aaagcaagtt cgccactaat gacacgtggc 1621 gcatattcta ttttcgacga agcatttttt gcagcagcca ttaaatcaat cgcatcttct 1681 ttaagtgcgg tcatatttga ttgtaattct ggcagttcag gcacagtttc aggttgttga 1741 tctaattctt cgccattggt gctgtcatct gttggtttta aggcattctc gcctaaagga 1801 atattggcaa agccgttgat tttgtctttg gtttcgccat aaattacagg tatatcatta 1861 cattcaatgc aagcaatttt agggtttgca ataaataagt ctttacccgt gttatcttga 1921 attttttcaa tgatataagg ttcaatgagg aagccaccat tatcaaacac cgcataagct 1981 cgcgccattt ctaatggtgt gaaagaggct gcgccaagtg ctaaggcttc actggcaaaa 2041 tattgatcac gtttaaaacc aaaacgttgt aaaaattctg ctgtgaaatc aatacctgcc 2101 gtttggatag cacgaatagc aattatattt ttggattgac ctaatcctac gcgtaaacgc 2161 atcgggccat cataacgatc aggcgagttt ttcggttgcc acattttttg tcccggtttt 2221 tgaatagaaa tcgggctgtc ttgtaatacg cttgaaagtg ttaagccttt ttctaatgct 2281 gccgcgtaaa taaatggttt gatagaagaa cccacttgaa ctaaagactg tgtggctcga 2341 ttgaatttac tttgttcata gctaaagcca ccgaccactg cttcaatcgc accattatct 2401 gaattaagag aaactaatgc tgaatttgct gcgggaattt gtcctaattg ccattcccca 2461 ttagcacgct gatgaatcca aatttgctcg ccgactttca caggattgct tctgcctgtc 2521 caacgcattg cattggttga taaggtcatt ttttccccag aagcgagcaa tatatcagca 2581 ccgcctttta caattccaat cactgccgca ggaataaatg gctctgaatc aggtagtttg 2641 cgtagaaaac cgacaatgcg atcattgtcc caagcggctt catttttttg ccataatggc 2701 gcgccaccgc gataaccgtg acgcatatcg taatcaatca agttattacg cacagctttt 2761 tgggcttcag cttggtcttt tgaaagtaca gtggtaaata ctttataacc actggtgtaa 2821 gcattttctt cgccaaaacg acgcaccatt tcttgacgca ccatttcagt gacataatcg 2881 gctcgaaatt caaattttgc gccgtgatag ctcgccacaa tcggctcttt caatgcagca 2941 tcatattctt ctttgctgat gtatttttca tctaacatac ggcttagcac cacattgcgg 3001 cgttcttctg aacgttttaa agaataaagc gggttcattg ttgaaggtgc tttaggtaaa 3061 ccagcaataa tcgccatttc cgataaggtc aattcattca atgatttacc gaaataggtt 3121 tgtgctgccg ctgcaacacc ataagaacga tagcctaaaa agattttgtt taaataaagc 3181 tctaatattt cttgtttgtt gagagtattt tcgatttcta ccgcaagcac ggcttcacga 3241 gctttacgaa taatggtttt ttctgaggtt aagaaaaagt tacgcgctaa ttgttgagta 3301 atcgtacttg cgccttgtga tgcaccgcca ttactcactg cgacaaacaa tgcacgggca 3361 atgccgatag ggtctaatcc gtgatgatcg taaaaacgac tgtcttccgt cgctaaaaat 3421 gcgtcaatta agcgttgtgg cacatcggct aatttcactg gaatacggcg ttgctcaccc 3481 acttcgccaa ttaatttacc gtcagccgta taaatctgca ttggttgctg taattcaacg 3541 gtttttaatg tttctactga gggcaattca gattttaagt ggaaatacaa cattccgcct 3601 gctactaaac ctaaaataca taaagttaat agggtgttta atattaattt tgcgatccgc 3661 atcgtaaaat tctcgcttcg ttaatgaata ttcttgtcaa gagacctatg atttggctgt 3721 taagtataaa agattcagcc tttaaagaat aggaaagaat atgcaattct ccctgaaaaa 3781 ttaccgcact ttacaaatcg gcattcatcg taagcagagt tattttgatt ttgtgtggtt 3841 tgatgatctc gaacagccac aaagttatca aatctttgtt aatgatcgtt attttaaaaa 3901 tcgtttttta caacagctaa aaacacaata tcaagggaaa acctttcctt tgcagtttgt 3961 agcaagcatt cccgcccact taacttggtc gaaagtatta atgttgccac aagtgttaaa 4021 tgcgcaagaa tgtcatcaac aatgtaaatt tgtgattgaa aaagagctgc ctattttttt 4081 agaagaattg tggtttgatt atcgttctac cccgttaaag caaggttttc gattagaggt 4141 tactgcaatt cgtaaaagta gcgctcaaac ttatttgcaa gattttcagc catttaatat 4201 taatatattg gatgttgcgt caaatgctgt tttgcgtgca tttcaatatc tgttgaatga 4261 acaagtgcgg tcagaaaata ccttattttt atttcaagaa gatgactatt gcttggcgat 4321 ttgtgaaaga tctcagcaat cacaaatttt acaatctcac gaaaatttga ccgcacttta 4381 tgaacaattt accgaacgtt ttgaaggaca acttgaacaa gtttttgttt atcaaattcc 4441 ctcaagtcat acaccattac ccgaaaactg gcagcgagta gaaacagaac tcccttttat 4501 tgcgctgggc aacgcgctat ggcaaaaaga tttacatcaa caaaaagtgg gtggttaaat 4561 gtcgatgaat ttattgcctt ggcgtactta tcaacatcaa aagcgtttac gtcgtttagc 4621 tttttatatc gctttattta tcttgcttgc tattaattta atgttggctt ttagcaattt 4681 gattgaacaa cagaaacaaa atttgcaggc acagcaaaag tcgtttgaac aacttaatca 4741 acagcttcat aaaactacca tgcaaattga tcagttacgc attgcggtga aagttggtga 4801 agttttgaca tctattccca acgagcaagt aaaaaagagt ttacaacagc taagtgaatt 4861 accttttcaa caaggagaac tgaataaatt taaacaagat gccaataact taagcttgga 4921 aggtaacgcg caagatcaaa cagaatttga actgattcat caatttttaa agaaacattt 4981 tcccaatgtg aaattaagtc aggttcaacc tgaacaagat acattgtttt ttcactttga 5041 tgtggaacaa ggggcggaaa aatgaaagct ttttttaacg atccttttac tccttttgga 5101 aaatggctaa gtcagccttt ttatgtgcac ggtttaacct ttttattgct attaagtgcg 5161 gtgatttttc gccccgtttt agattatata gaggggagtt cacgtttcca tgaaattgaa 5221 aatgagttag cggtgaaacg ttcagaattg ttgcatcaac agaaaatttt aacctcttta 5281 caacagcagt cggaaagtcg aaaactttct ccagaactgg ctgcacaaat tattcctttg 5341 aataaacaaa ttcaacgttt agctgcgcgt aacggtttat ctcagcattt acgttgggaa 5401 atggggcaaa agcctatttt gcatttacag cttacaggtc attttgaaaa aacgaagaca 5461 tttttatccg cacttttggc taattcgtca cagctttctg taagtcggtt gcaatttatg 5521 aaacccgaag acggcccatt gcaaaccgag atcatttttc agctagataa ggaaacaaaa 5581 tgaaacattg gtttttcctg attatattat tttttatgaa ttgcagttgg ggacaagatc 5641 ctttcgataa aacacagcgt aaccgttctc agtttgataa cgcacaaaca gtaatggagc 5701 aaacagaaat aatttcctca gatgtgccta ataatctatg cggagcggat gaaaatcgcc 5761 aagcggctga aattcctttg aacgctttaa aattggtggg ggtagtgatt tctaaagata 5821 aagcctttgc cttgttgcaa gatcaaggtt tgcaagttta cagcgtttta gagggcgttg 5881 atgtggctca agagggctat attgtagaaa aaatcaacca aaacaatgtt caatttatgc 5941 gtaagctagg agagcaatgt gatagtagtg aatggaaaaa attaagtttt taaaggaaga 6001 ttatgaagaa atatttttta aagtgcggtt attttttagt atgtttttgt ttgccattaa 6061 tcgtttttgc taatcctaaa acagataacg aacgtttttt tattcgttta tcgcaagcac 6121 ctttagctca aacactggag caattagctt ttcaacaaga tgtgaattta gtgattggag 6181 atatattgga aaacaagatc tctttgaaat taaacaatat tgatatgcca cgtttgctac 6241 aaataatcgc aaaaagtaag catcttactt tgaataaaga tgatgggatt tattatttaa 6301 acggcagtca atctggcaaa ggtcaggttg caggaaatct tacgacaaat gaaccgcact 6361 tagtgagtca cacggtaaaa ctccattttg ctaaagcttc tgaattaatg aaatccttaa 6421 caacaggaag tggctctttg ctttctcccg ctgggagcat tacctttgat gatcgcagta 6481 atttgctggt tattcaggat gaacctcgtt ctgtgcaaaa tatcaaaaaa ctgattgctg 6541 aaatggataa gcctattgaa cagatcgcta ttgaagcgcg aattgtgaca attacggatg 6601 agagtttgaa agaacttggc gttcggtggg ggatttttaa tccaactgaa aatgcaagac 6661 gagttgcggg cagccttaca ggcaatagct ttgaaaatat tgcggataat cttaatgtaa 6721 attttgcgac aacgacgaca cctgctggct ctatagcatt acaagtcgcc aaaattaatg 6781 ggcgattgct tgatttagaa ttgagtgcgt tggagcgtga aaataatgta gaaattattg 6841 caagccctcg cttactcact accaataaga aaagtgcgag cattaaacag gggacagaaa 6901 ttccttacat cgtgagtaat actcgtaacg atacgcaatc tgtggaattt cgtgaggcgg 6961 tgcttggttt ggaagtgacg ccacatattt ctaaagataa caatatctta cttgatttat 7021 tggtaagtca aaattcccct ggttctcgtg tcgcttatgg acaaaatgag gtggtttcta 7081 ttgataaaca agaaattaat actcaggttt ttgccaaaga tggggaaacc attgtgcttg 7141 gcggcgtatt tcacgataca atcacgaaaa gcgaagataa agtgccattg cttggcgata 7201 tacccgttat taaacgatta tttagcaaag aaagtgaacg acatcaaaaa cgtgagctag 7261 tgattttcgt cacgccacat attttaaaag caggagaaaa cgttagaggc gttgaaacaa 7321 aaaagtgagg gtaaaaaata actttttaaa tgatgaattt ttttaatttt cgctgtatcc 7381 actgtcgtgg caatcttcat atcgcaaaaa atgggttatg ttcaggttgc caaaaacaaa 7441 ttaaatcttt tccttattgc ggtcattgtg gttcggaatt gcaatattat gcgcagcatt 7501 gtgggaattg tcttaaacaa gaaccaagtt gggataagat ggtcattatt gggcattata 7561 ttgaacctct ttcgatattg attcagcgtt ttaaatttca aaatcaattt tggattgacc 7621 gcactttagc tcggctttta tatcttgcgg tacgtgatgc taaacgaacg catcaactta 7681 aattgccaga ggcaatcatt ccagtgcctt tatatcattt tcgtcagtgg cgacggggtt 7741 ataatcaggc agatttatta tctcagcaat taagtcgttg gctggatatt cctaatttga 7801 acaatatcgt aaagcgtgtg aaacacacct atactcaacg tggtttgagt gcaaaagatc 7861 gtcgtcagaa tttaaaaaat gccttttctc ttgctgtttc gaaaaatgaa tttccttatc 7921 gtcgtgttgc gttggtggat gatgtgatta ctactggttc tacactcaat gaaatctcaa 7981 aattgttgcg aaaattaggt gtggaggaga ttcaagtgtg ggggctggca cgagcttaat 8041 ataaagcact ggaaaaaaaa gcgcgataag cgtattattc ccgatacttt ctctcaagta 8101 tttaggacat aattatggaa caagcaaccc agcaaatcgc tatttctgat gccgcacaag 8161 cgcattttcg aaaactttta gacacccaag aagaaggaac gcatattcgt attttcgcgg 8221 ttaatcctgg tacgcctaat gcggaatgtg gcgtatctta ttgccccccg aatgccgtgg 8281 aagaaagcga tattgaaatg aaatataata ctttttctgc atttattgat gaagtgagtt 8341 tgcctttctt agaagaagca gaaattgatt atgttaccga agagcttggt gcgcaactga 8401 ccttaaaagc accgaatgcc aaaatgcgta aggtggctga tgatgcgcca ttgattgaac 8461 gtgttgaata tgtaattcaa actcaaatta acccacagct tgcaaatcac ggtggacgta 8521 taaccttaat tgaaattact gaagatggtt acgcagtttt acaatttggt ggtggctgta 8581 acggttgttc aatggtggat gttacgttaa aagatggggt agaaaaacaa cttgttagct 8641 tattcccgaa tgaattaaaa ggtgcaaaag atataactga gcatcaacgt ggcgaacatt 8701 cttattatta gtgagttata aaagaagatt tataatgacc gcacttttga aagtgcggtt 8761 atttttatgg agaaaaaatg aaaatacttc aacaagatga ttttggttat tggttgctta 8821 cacaaggttc taatctgtat ttagtgaata atgaattgcc ttttggtatc gctaaagata 8881 ttgatttgga aggattgcag gcaatgcaaa ttggggaatg gaaaaattat ccgttgtggc 8941 ttgtggctga gcaagaaagt gatgaacgag aatatgtgag tttgagtaac ttgctttcac 9001 tgccagagga tgaattccat atattaagcc gaggtgtgga aattaatcat tttctgaaaa 9061 cccataaatt ctgtggaaag tgcggtcata aaacacaaca //