GenBank-Updates@genbank.bio.net (01/16/91)
LOCUS ECAPNLA 2172 bp ds-DNA BCT 16-JAN-1991 DEFINITION Erwinia carotovora pectin lyase (pnlA) gene, complete cds. ACCESSION M59909 KEYWORDS pectin lyase. SOURCE Erwinia carotovora (Ecc71) DNA. ORGANISM Erwinia carotovora Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 2172) AUTHORS Chatterjee,A., McEvoy,J.L., Chambost,J.P., Blasco,F. and Chatterjee,A.K. TITLE Nucleotide sequence and molecular characterization of pnlA, the structural gene for damage-inducible pectin lyase of Erwinia carotovora subsp. carotovora strain 71 JOURNAL Unpublished (1990) STANDARD full staff_review FEATURES Location/Qualifiers CDS 601..1473 /EC_number="4.2.2.1.0" /gene="pnlA" /evidence=EXPERIMENTAL /codon_start=601 /product="pectin lyase" BASE COUNT 615 a 431 c 498 g 628 t ORIGIN 1 tactgcaaaa aaacggatta attactctaa agcctgacac gggcttattg ccgacggtgc 61 tggatatcac gacgaatcca cacaacctgc gtattatgga agtggaaggg cacagttgcc 121 gcgtttgtta gacgatccac aagtgacggt agccattatt agtacgacct atattcagca 181 aacgggctta acgccaacga aagacggtat ttttattgag gataaagaat caccgtatgt 241 gaatatcatt gtgacgcgtg aaaataataa agaggcggaa aacgtcaaaa aatttattca 301 ggcctatcag tctgatgaag ttgaacaggc tgcgaaccgt atttttaatg gcggcgcggt 361 aaaaggctgg taatgataat aatgtgataa tcgtagctag cctgccattt tactaaaaga 421 tggcagcgta ttaattgggt attgaattat tcgcaaggtt gtttttttat taaactcgat 481 taataagcgt aatgaaatcc tttatataca atttttaatt gtcggaggcg tgttatttgt 541 ttttgattaa ataatacgtt ggaagacatt attattcact cattgtaaaa aggaaaattt 601 atggcttatc caacaacaaa tcttactggg attattggtt ttgcaaaagc ggcaaatgta 661 actggaggca cgggaggtaa agtcgttacg gtaaattctt tggccgattt taaatcagca 721 gtgagcggtt ccgcaaaaac tattgtggtg ctgggattat cgctgaaagc ctcggcattg 781 accaaggtgg tatttggcag caataaaacc atcgttggtt ctttcggtgg gtacgctaat 841 gtactgacca atattcacct gcgcgctgag agcaattcat ctaacgtcat tttccagaat 901 ctggttttta aacatgatgt tgccatcaaa gataatgacg atatccagct gtatttgaac 961 tacggcaagg gatattgggt ggatcactgt tcatggcctg ggcatacgtg gagcgataac 1021 gatggtagcc tcgataaact gatttatatc ggcgagaagg cggattacat cacgatcagt 1081 aactgcttat tctcaaacca taaatatggt tgcatcttcg gccatccggc agatgacaat 1141 aacagcgctt acaatggcta tccgcgtctg actatttgtc ataactatta cgaaaatatt 1201 caggtgcgtg cgcccggcct gatgcgctat ggttatttcc acgtcttcaa ccaacctacg 1261 tcaataaatt caacctggcc tttacagttg cgcaggaatg ccaatctaat ttctgagcgt 1321 aacgtatttg gtaccggcgc ggaaaataaa gggatggttg atgataaggg caatggttca 1381 accttacgga taatggcagt tcaccggctg cggtggcgag caaatcgcct gcggcgaaat 1441 ggacggcgtc atctaactat tcatacagtt tgatgaccac gtcagcggcg aaatcctggg 1501 tggtgtctaa tgcgggagcg caaaatagcg ctctcaaatt cccatcgtaa tcgttgaacg 1561 tatattgaat gacgttccag tatgcgcagt attttattgt gaagtgaaat gcattaaata 1621 ctgagtctat cacactatgc cacttggcga atttgttaat gccgagtggc atagttattg 1681 gttcatgttc aacgcaatat aataggttcg ttcaaaaaat taagcggcaa tattatttct 1741 cgtattgtga gtaaaatacc actctactgt tttcttaatt aactcttcgg ttgcatcgac 1801 atagtgttgc ggtgatgttc tgacttcctg ctccagaatc agaggaagct cggtacaacc 1861 cagaataatt ttctcaacgc cagcctgcaa caggcgatct tttaccggtg acaacaggct 1921 ataggcgccg gcaatatcac cggatttata agcatagatg ctttccatta cctggtgttg 1981 gtctgcatca tccggcgtgt agcaatcaat attatcggta atcaggttgt cctgataaat 2041 tctcgctttg accgtcgctg tcgtcgctaa taggccgacg cgtgtggtgt tggcatgctt 2101 aatcgcctga caggtcacat caataatgct gatcatttcc gcacggcact gctgttttaa 2161 gtcattaaac ca //
GenBank-Updates@genbank.bio.net (03/29/91)
LOCUS ECAPNLA 2172 bp ds-DNA BCT 29-MAR-1991 DEFINITION Erwinia carotovora pectin lyase (pnlA) gene, complete cds. ACCESSION M59909 KEYWORDS pectin lyase. SOURCE Erwinia carotovora (Ecc71) DNA. ORGANISM Erwinia carotovora Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 2172) AUTHORS Chatterjee,A., McEvoy,J.L., Chambost,J.P., Blasco,F. and Chatterjee,A.K. TITLE Nucleotide sequence and molecular characterization of pnlA, the structural gene for damage-inducible Pectin Lyase of Erwinia carotovora subsp. carotovora 71 JOURNAL J. Bacteriol. 173, 1765-1769 (1991) STANDARD full staff_review FEATURES Location/Qualifiers CDS 601..1473 /EC_number="4.2.2.1.0" /product="pectin lyase" /gene="pnlA" /evidence=EXPERIMENTAL /codon_start=601 BASE COUNT 615 a 431 c 498 g 628 t ORIGIN 1 tactgcaaaa aaacggatta attactctaa agcctgacac gggcttattg ccgacggtgc 61 tggatatcac gacgaatcca cacaacctgc gtattatgga agtggaaggg cacagttgcc 121 gcgtttgtta gacgatccac aagtgacggt agccattatt agtacgacct atattcagca 181 aacgggctta acgccaacga aagacggtat ttttattgag gataaagaat caccgtatgt 241 gaatatcatt gtgacgcgtg aaaataataa agaggcggaa aacgtcaaaa aatttattca 301 ggcctatcag tctgatgaag ttgaacaggc tgcgaaccgt atttttaatg gcggcgcggt 361 aaaaggctgg taatgataat aatgtgataa tcgtagctag cctgccattt tactaaaaga 421 tggcagcgta ttaattgggt attgaattat tcgcaaggtt gtttttttat taaactcgat 481 taataagcgt aatgaaatcc tttatataca atttttaatt gtcggaggcg tgttatttgt 541 ttttgattaa ataatacgtt ggaagacatt attattcact cattgtaaaa aggaaaattt 601 atggcttatc caacaacaaa tcttactggg attattggtt ttgcaaaagc ggcaaatgta 661 actggaggca cgggaggtaa agtcgttacg gtaaattctt tggccgattt taaatcagca 721 gtgagcggtt ccgcaaaaac tattgtggtg ctgggattat cgctgaaagc ctcggcattg 781 accaaggtgg tatttggcag caataaaacc atcgttggtt ctttcggtgg gtacgctaat 841 gtactgacca atattcacct gcgcgctgag agcaattcat ctaacgtcat tttccagaat 901 ctggttttta aacatgatgt tgccatcaaa gataatgacg atatccagct gtatttgaac 961 tacggcaagg gatattgggt ggatcactgt tcatggcctg ggcatacgtg gagcgataac 1021 gatggtagcc tcgataaact gatttatatc ggcgagaagg cggattacat cacgatcagt 1081 aactgcttat tctcaaacca taaatatggt tgcatcttcg gccatccggc agatgacaat 1141 aacagcgctt acaatggcta tccgcgtctg actatttgtc ataactatta cgaaaatatt 1201 caggtgcgtg cgcccggcct gatgcgctat ggttatttcc acgtcttcaa ccaacctacg 1261 tcaataaatt caacctggcc tttacagttg cgcaggaatg ccaatctaat ttctgagcgt 1321 aacgtatttg gtaccggcgc ggaaaataaa gggatggttg atgataaggg caatggttca 1381 accttacgga taatggcagt tcaccggctg cggtggcgag caaatcgcct gcggcgaaat 1441 ggacggcgtc atctaactat tcatacagtt tgatgaccac gtcagcggcg aaatcctggg 1501 tggtgtctaa tgcgggagcg caaaatagcg ctctcaaatt cccatcgtaa tcgttgaacg 1561 tatattgaat gacgttccag tatgcgcagt attttattgt gaagtgaaat gcattaaata 1621 ctgagtctat cacactatgc cacttggcga atttgttaat gccgagtggc atagttattg 1681 gttcatgttc aacgcaatat aataggttcg ttcaaaaaat taagcggcaa tattatttct 1741 cgtattgtga gtaaaatacc actctactgt tttcttaatt aactcttcgg ttgcatcgac 1801 atagtgttgc ggtgatgttc tgacttcctg ctccagaatc agaggaagct cggtacaacc 1861 cagaataatt ttctcaacgc cagcctgcaa caggcgatct tttaccggtg acaacaggct 1921 ataggcgccg gcaatatcac cggatttata agcatagatg ctttccatta cctggtgttg 1981 gtctgcatca tccggcgtgt agcaatcaat attatcggta atcaggttgt cctgataaat 2041 tctcgctttg accgtcgctg tcgtcgctaa taggccgacg cgtgtggtgt tggcatgctt 2101 aatcgcctga caggtcacat caataatgct gatcatttcc gcacggcact gctgttttaa 2161 gtcattaaac ca //
GenBank-Updates@genbank.bio.net (05/15/91)
LOCUS ECAPNLB 1291 bp ds-DNA BCT 15-MAY-1991 DEFINITION Erwinia carotovora pectin lyase (pnl) gene, complete cds. ACCESSION M65057 KEYWORDS pectin lyase; pnl gene. SOURCE Erwinia carotovora (strain Er) DNA. ORGANISM Erwinia carotovora Prokaryota; Bacteria; Gracilicutes; Scotobacteria; Facultatively anaerobic rods; Enterobacteriaceae. REFERENCE 1 (bases 1 to 1291) AUTHORS Ohnishi,H., Nishida,T., Yoshida,A., Kamio,Y. and Izaki,K. TITLE Nucleotide sequence of pnl gene from Erwinia carotovora Er JOURNAL Biochem. Biophys. Res. Commun. 176, 321-327 (1991) STANDARD full staff_entry FEATURES Location/Qualifiers CDS 290..1234 /product="pectin lyase" /gene="pnl" /codon_start=290 BASE COUNT 366 a 253 c 297 g 375 t ORIGIN 1 taccccctat cagtctgatg aagttgaaca ggctgcgaac cgtattttta atggcggcgc 61 ggtaaaaggc tggtgatgat aatcgtagcg ctgccatttt actaaaagat ggcggcgtat 121 taattgggta ttgaattatt cgcaaggttg tttttttatt aaactcgatt aataagcgta 181 atgaaatcct ttctatacaa tttttaattg tcggaggcgt attatttagt ctcaattaaa 241 taatacgctg gaagacatta ttattcactc attgtaaaaa ggaaaactta tggcttatcc 301 aacaacaaat cttactgggc ttattggttt tgcaaaagcg gcaaaagtta ccggaggaac 361 gggcggtaaa gtcgttacgg taaattcttt ggccgatttt aaatcagcgg tgagcggttc 421 cgcaaaaact attgtggtgc tgggatcatc gctgaaaacg tcggccttga ccaaggtggt 481 atttggcagc aataaaacca tcgtcggttc tttcggtggc gctaatgtac tgaccaatat 541 tcacctgcgt gctgagagca attcatctaa cgtcattttc cagaatctgg tttttaaaca 601 tgatgttgcc atcaaagata atgacgatat ccagctgtat ttgaactacg gtaaagggta 661 ttgggtggat cactgttcat ggcctgggca tacgtggagc gataacgatg gtagcctcga 721 taaactgatt tatatcggcg agaaggcgga ttacatcacg atcagtaact gcttattctc 781 aaaccataaa tatggttgca ttttcggcca tccggctgac gataataaca gcgcttacaa 841 tggctatcca cgtttgacta tttgccataa ctattacgaa aatattcagg tgcgtgcgcc 901 cggcctgatg cgttatggct atttccacgt attcaataac tacgtcaata aattccagtt 961 ggcttttacc gtcgcgcaaa atgccaacgt tatttctgaa cgcaacgtat ttggcagcgg 1021 tgctgaaaag aaagggatgg ttgatgataa aggcaatggt tcaaccttta ccgataatgg 1081 cagttcgcca gcagcggtag cgagtaaatc gccagcggcg aaatggacgg catcatctaa 1141 ctattcatac agtttgatga caaccgcggc ggcccaatcc tgggttgttt cgaatgcagg 1201 ggcacaaaat agtgcgctga aattcccatc ataatcacgg aaggtttatt ttatgacgta 1261 cctgcatgct cacttttatt gataattgaa a //