GenBank-Updates@genbank.bio.net (05/16/91)
LOCUS MBGACG 2585 bp ss-DNA Circular VRL 16-MAY-1991
DEFINITION Bean golden mosaic virus (BGMV), DNA A, complete sequence.
ACCESSION D00200
KEYWORDS DNA A; complete genome.
SOURCE Bean golden mosaic virus DNA, clone pBGH1.
ORGANISM Bean golden mosaic virus
Viridae; ss-DNA nonenveloped viruses; Geminiviridae.
REFERENCE 1 (bases 1 to 2585)
AUTHORS Morinaga,T., Ikegami,M., Shimotohno,K. and Miura,K.
TITLE Total nucleotide sequences of the infectious cloned DNAs of bean
golden mosaic virus
JOURNAL Microbiol. Immunol. 31, 147-154 (1987)
STANDARD simple automatic
COMMENT The genome of BGMV is composed of two single-stranded circular
DNAs, A and B. Nucleotide sequences of DNAs A and B revealed the
presence of 8 potential coding regions for proteins (ORF1,2 in A,
ORF3~8 in B). ORFs 5,6,7, and 8 have not the TATA sequence or the
AATAA sequence near the coding regions (see [1]).
Authors of [1] originally named the major DNA component(shorter
DNA) "DNA A" andthe minor one (longer DNA) "DNA B", although it is
now more common to call the longer DNA as "DNA A" and the shorter
one as "DNA B".
FEATURES Location/Qualifiers
CDS 510..1280
/note="ORF1 (putative)"
/codon_start=510
CDS complement(1314..2195)
/note="ORF2 (putative)"
/codon_start=2195
BASE COUNT 761 a 438 c 511 g 875 t
ORIGIN 5' end of the 205 base sequence common to both DNAs A and B.
1 tggcatattt gtaaatatgc gagtgtctcc aaatgagttt gcgagtgtct ccaattgagg
61 ctcctcaaac tctcgctatg caattggaga ctggagtaca atatatacta gaaccctcaa
121 tctcttgaat tatcacattc atacacgtgg cggccatccg atataatatt accggatggc
181 cgcccgcgcc cctttatatc cgtacgccgc atttcgattc cagaaatgcc cttcccacgc
241 tttatacacg gtattctata ccgttggata aagcttattg cactctatca ttgaattttg
301 aattattgtc attgcttttg tgtttcgata tttatggatg ggtctgacac attactgaca
361 ttgtacaatt cgaccaatca aaattcacga tagaagtcta gttaaatcgt ttattaatat
421 gagatcctta taagtaaaca tatttgataa agaaaaaacg atcatcgttt ttaatgtttg
481 tcttgttatt ttaggcaaac gatttaacaa tgtatgcgtc taaatataaa cgtggttcgt
541 ctaactatca acgacgaggt tattcacgtt atcaaggttt tcgacgaacg gcaattgtta
601 cacgacacga tggtaagcgt cgacaacatc aatctaataa gtctaatgaa gatcctaaga
661 tgttagtgca atgtatacgt gaaaatcagt ttggtcctga ttttgttatg tcccataata
721 ctgcaatatc gacgttcatt aattatcctc aacttggtaa gatcgaacct aatcgatgta
781 ggtcatatat caagttgaaa cgcttgcgtt tcaaagggac ggttaagatt gaacgcatgc
841 acactgatgt taacatggat ggattatctc ctaagattga aggcgtattt agtattgtta
901 ttgtggttga tcggaaacca catttaagtc ctagtggatg tctccataca tttgacgaat
961 tgtttggagc aaggataaat agccatggaa acctagctgt gatgccttct ttgaaagata
1021 gattttacat acggcatttg ttgaagcgtg ttttatctgt ggacaaagac acgactatga
1081 tagacgttga gggttctact ttgttgtcta ataagcgtta taatatgtgg tctacattta
1141 atgattttga tcatgactca tgtaatggtg tttatgctaa tattgctaag aacgctttat
1201 tagtctatta ttgctggatg tcagatatta tgtctaaggc atccacattt gtatcatatg
1261 atcttgatta tgttggttga acgtcgatct aacacaagaa taaatatacg tatttatttc
1321 aaagactttg gttgaacatg aatacaattg ttgttgatac attcatttac cgttgatcgc
1381 acaatttcgt ttaattgtgc aattgacagt gttatgtttg attgggctct ctgagccccg
1441 ataattgacg ctgaatctcc cgggtccaaa acactgcttc ccagtctgtt taaattcttg
1501 tatggatgta ttgcgctatc taagtccgag tccgcatcta aatgagatac accgattgta
1561 ctttttgagg cccatgactc acccggcttt aattcgattg ggccttgtag tccatacttt
1621 gataatgatg cggatcgtat caatttcctt tcccacttcc cgtagtcgac atgtgagaag
1681 tcgatgtcct tattggaaaa ctgctttgat aatattttta ctgttggtgc ccggaagggg
1741 atatctaccg aatgtttagc cgttgataat ttcagttttc ccttgaattt tgcgaaatgt
1801 gtcctttgat gaacgttggt gtctgaaact ctgtaataga gtttccatgg tatcgggtct
1861 tttaacgaga aaaatgacga agagaagtag tggagatcta tgttgcatct tatgggaaac
1921 gtccatgatg cttgtaatga ttcattgtct gtcatccttt tgtcgtgaat ctccactaca
1981 accgatcctg tcgcgtttat aggcacctgt tgcctatact caattacaca atgatcgatc
2041 ttcatacaac tgcgactgaa tcgtgctgat agttgagacg ctgtggaagg aaattgaagg
2101 attatctcag ttagatcatg agacaattga tattcgtctc tgtgagactc tatgtaatta
2161 aatgcatttg gaggatttgc taactgagaa tccatttaag aataaatggc cgcagcggaa
2221 ttgctcagag agataaggtc cactcaacta atggatagct aacaaataag aactatattt
2281 gtgaaacact catacaactg atatactgac aaggagaatg tgaaatagat tatagtgaga
2341 tagagaagca ttgttgtaac ttatatagac agttgtatgc gattaaagct ctttttgaaa
2401 aagaacatat tatttaagta atgatcatga aatatatatc ttatatatat atattgtatg
2461 aattggacat gattattgtt atactaaatg tcgtacgatg atcagaagtt aatatggatt
2521 atattgtttt ttatgaatta tttgaaggtt aataagcaaa acgaagccgt tttgaactta
2581 ttcgt
//GenBank-Updates@genbank.bio.net (05/16/91)
LOCUS MBGBCG 2647 bp ss-DNA Circular VRL 16-MAY-1991
DEFINITION Bean golden mosaic virus (BGMV), DNA B, complete genome.
ACCESSION D00201
KEYWORDS BGMV; DNA B; bean golden mosaic virus; complete genome.
SOURCE Bean golden mosaic virus DNA, clone pBGC6.
ORGANISM Bean golden mosaic virus
Viridae; ss-DNA nonenveloped viruses; Geminiviridae.
REFERENCE 1 (bases 1 to 2647)
AUTHORS Morinaga,T., Ikegami,M., Shimotohno,K. and Miura,K.
TITLE Total nucleotide sequences of the infectious cloned DNAs of bean
golden mosaic virus
JOURNAL Microbiol. Immunol. 31, 147-154 (1987)
STANDARD full staff_entry
COMMENT The genome of BGMV is composed of two single-stranded circular
DNAs, A and B. Nucleotide sequence of DNAs A and B revealed the
presence of 8 potential coding regions for proteins (ORF1,2, in A,
ORF3~8 in B). ORFs 5,6,7, and 8 have not the TATA sequence or the
AATAA sequence near the coding regions (see [1]).
Authors of [1] originally named the major DNA component(shorter
DNA) "DNA A" andthe minor one (longer DNA) "DNA B", although it is
now more common to call the longer DNA as "DNA A" and the shorter
one as "DNA B".
FEATURES Location/Qualifiers
CDS join(complement(1..6),complement(1592..2647))
/note="ORF4 (putative)"
/codon_start=6
CDS 344..688
/note="ORF6 (putative)"
/codon_start=344
CDS 370..1125
/note="ORF3 (putative)"
/codon_start=370
CDS complement(703..1020)
/note="ORF7 (putative)"
/codon_start=1020
CDS complement(1122..1520)
/note="ORF8 (putative)"
/codon_start=1520
CDS complement(1267..1785)
/note="ORF5 (putative)"
/codon_start=1785
BASE COUNT 707 a 521 c 594 g 825 t
ORIGIN 5' end of the 205 base sequence common to both DNAs A and B.
1 tggcatattt gtaaatatgc gagtgtctcc aaatgagttt gcgagtgtct ccaattgagg
61 ctcctcaaac tctcgctatg caattggaga ctggagtaca atatatacta gaaccctcaa
121 tctcttgaat tatcacatcc atacacgtgg cggccatccg atataatatt accggatggc
181 cgcccgcgcc cctttatatc cgtactgctc cacgtggtgc tttaatttaa attaaagatg
241 tctatttttg actgaccaat gcttttgcat gtgagaagct tagatatttg tgtaaaactt
301 ggcgactaag ttttaccttc gtttataaat ttaaattaaa tgtatgccca ttccatgtgt
361 aagtccagaa tgcctaagcg tgatgcgccg tggcgtcata tggcgggaac ctccaaggtt
421 tcccgttctg gcaattattc tccaagtggt ggaatgggct caaaatccaa caaggccaat
481 gcatgggtca acaggcccat gtatagaaag ccaaggatat atcggatgta caaaagccca
541 gatgtgccaa agggatgtga aggaccttgc aaggtccaat catatgaaca acgccatgat
601 atatctcatg ttggtaaggt tatgtgtata tccgatatca cacgtgggaa tggtattacc
661 catcgtgttg gtaaacgttt ttgtgtgaag tctgtgtata ttttaggtaa gatatggatg
721 gatgaaaaca tcatgcttaa gaaccatacc aatagtgtca ttttttggtt ggtccgtgac
781 cgtagaccat atggaacccc tatggatttt ggtcaagttt ttaacatgtt tgacaatgaa
841 cctagtactg ctacggtcaa gaacgatctt cgtgatcgtt atcaagttat gcataggttc
901 aatgcaaagg tgtctggtgg tcaatatgca agcaacgagc aagccttggt aaggcgtttt
961 tggaaggtga acaaccatgt cgtctataac caccaggaag caggaaaata cgagaatcat
1021 acggagaatg cgttattgtt gtatatggca tgtacacatg cctctaatcc tgtatatgcg
1081 acattgaaaa ttcggatcta tttctatgat tcgataacca attaataaaa tttatatttt
1141 atatcatgat tctcaagtac agtatttaca tatgatttgt ttgttgcgaa ctgaacagct
1201 cgaatgacat tgtttattcc tattacgcct aacctatgta aatacaataa aactaagagt
1261 ctaaatctat ttaaatatgt cgtcccagaa gcttgaatcg atgtcgtcca gacttggaag
1321 ttcaggaatg ctttgtggag atccagtgct ttcctgaggt tgtgattgaa cctgacttgg
1381 atgtggtata tccttgtccg tgtgtatgct ggatcttcca cccgcatgat cttgaaataa
1441 aggggatttg gtacctccca aataaaaacg gaattctctg cctgatgcgc agtgatgttc
1501 tcccctgtgc gtgaatccat gatctgcgca cttgatatgg taaaatatgg aacagccgca
1561 gttcaagtca atgcgtcgtc gacgaatggc tttatgtttg gcaatcctgt gctgtgcttt
1621 gatagagggg ggctgtgagg gtgacgaaga tcgcattatg aatggtccag ttgtgtaaag
1681 ctcggttttc ctctttgttg aggaagtctt tataactgga accctcacct ggattgcaca
1741 gcacgattga tggtattcct cctttaattt gaaccggctt tccatattta cagttggatt
1801 gccagtcctt ttgtgcccca attagctctt tccagtgctt taacttcaaa taattggggc
1861 ttatgtcatc aatgacgttg tattccactg agttggaata gacacgtgaa ttaaagtcca
1921 aatgaccgct caaataatta tgtgggccta atgcacgagc ccacattgtc tttccagttc
1981 gtgaatcacc ttcgacgatg atactaatag gtctttctgg ccgcgcagcg gaaccccttc
2041 cgaaatagtc gtcaacccag tcttgcataa caaccggaat attgacgaat gatgacaacg
2101 gaaatggagg aacccatggt tccggcactt tgaagaagat ccgttcgaga ttagaacgga
2161 tgttgtgatt ttgaaggacg taatctttcg gttgttcttc cttcaatatt gtcaaggcag
2221 attcaattga atctgcgttt aatgcctttg cgtatgagtc gttggcagac tgctgacctc
2281 ctcttgcaga tctgccgtcg acttggaatt gtccccattc gattgtgact ccatctttgt
2341 cgatgtattc tttgacgtcg gaacttgatt tagctccctg aatgttcgga tggaaatgtg
2401 ctgacctggt tgtggatacc aggtcgaaca atcttttatt tgtgcagatg aatttacctt
2461 cgaactgaat aagcgcatga agatggggtt caccattatc gtgacgttcc tcacagacct
2521 tgatgaattt cttattcgtc gttgtatgaa tcttttgaag ttgcgaaaga gcttcttctt
2581 tcggtatagt gcaacgagga taagtgagga aatagttttt ggactgaact ctaaatcttt
2641 gaggtgg
//