[bionet.molbio.genbank.updates] Human Alu repeat sequence.

GenBank-Updates@genbank.bio.net (04/03/91)

LOCUS       HUMALUAA      775 bp ds-DNA             PRI       03-APR-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M62508
KEYWORDS    Alu repetitive element.
SOURCE      Human lymphoblast DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Bodrug,S.E., Holden,J.J.A., Ray,P.N. and Worton,R.G.
  TITLE     Molecular analysis of X-autosome translocations in females with
            duchenne muscular dystrophy
  JOURNAL   Unpublished (1991)
  STANDARD  full staff_review
BASE COUNT      211 a    166 c    202 g    196 t
ORIGIN      Chromosome 2.
        1 caggtgggca ggacaagtct tcagtatcta cagaaatgcc tagtattgag ctagcccatt
       61 tgagaaagta aagatgtttc tggaaagaca atctgattat tttcttagga agtagtgtga
      121 aataatctat gttactatgc gctagatgat gtggccaaga ctgggagtaa cacgtattgg
      181 aagaagagaa tggggtcctg tcttttctct gttctgggga agaaacctca tctcttaaca
      241 gacgttccgc acatcctttc cagtatgccg tgttcacgtg aggtgagacg aggaagagcg
      301 agtgtttttc acaagagtct catggaatcc aaagagtaat gaccgttcct ggatgttttg
      361 catcatgttc caaatcatag ccaccgggct gtcagggtca gccatccgtc ctgtgctatc
      421 tcatctggca aagagaagga catgttgtgt atgttcctgt aagacagagt ggctcttact
      481 aaaatcaaat aattggctgg gtgtggtggc tcacacctgt aatcccagca ctttgggaag
      541 ccaaggcagg cagattgcct gaagtcagaa gtttgagacc agcccggcca acatggtgaa
      601 accccatctc tgctaaaaat acgaaattta gctgggcgtt gtggcatgtg cctgtaatcc
      661 cagctactcg gaggctgagg caggagaatt gcttgaatcc aggaggcaga ggttgtagtg
      721 agccaagatc acgccactac actccagcct gggcaacaga gcaagactcc atctc
//

GenBank-Updates@genbank.bio.net (04/03/91)

LOCUS       HUMALUAB      579 bp ds-DNA             PRI       03-APR-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M62509
KEYWORDS    Alu repetitive element.
SOURCE      Human lymphoblast DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Bodrug,S.E., Holden,J.J.A., Ray,P.N. and Worton,R.G.
  TITLE     Molecular analysis of X-autosome translocations in females with
            duchenne muscular dystrophy
  JOURNAL   Unpublished (1991)
  STANDARD  full staff_review
BASE COUNT      188 a     79 c    108 g    204 t
ORIGIN      Chromosome 4.
        1 gacacgtatg gatattacac aaaaatacaa gccttaagga aataggggat ttggtccacc
       61 ttgttctctg tggtatctct agcattcaga ttaaggctta tctcatagtt aatgttcaga
      121 catacatgtt aagtaaatga attattattt ttttaaattt gattttgtaa catctgaagt
      181 atgaagatta taataatcag cattaaaatc tggtttggag agacctgtat tagaggtgtg
      241 taaacattgg tctcctttat ttgctattaa catgtatata gtcagtgttg aatttaaaat
      301 gatgtaaatc ttgagtgttc gctgaggttg actaccagta ttttcaggag atcaccatgt
      361 ggtatgatct gagatgtctt cagacctact ttgctctaaa aagttattta cactttgcaa
      421 tgtttgttaa actaccaaga tctgtatatt ttcactatgt ttgtgaagat gacagtttga
      481 aaataagaag atgaaaaaca atatattaca tatgtatgtt tgggagacaa agataacccc
      541 aagtttagaa atgtgaggca ggcctatatt tctctccaa
//

GenBank-Updates@genbank.bio.net (04/03/91)

LOCUS       HUMALUAC      860 bp ds-DNA             PRI       03-APR-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M62510
KEYWORDS    Alu repetitive element.
SOURCE      Human lymphoblast DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Bodrug,S.E., Holden,J.J.A., Ray,P.N. and Worton,R.G.
  TITLE     Molecular analysis of X-autosome translocations in females with
            duchenne muscular dystrophy
  JOURNAL   Unpublished (1991)
  STANDARD  full staff_review
BASE COUNT      255 a    204 c    151 g    250 t
ORIGIN      Chromosome X.
        1 gctcacagtc tacacaggcc acagtcctct attagagtgg ttctcaaagt gtggtccctg
       61 gaccagcagc atcagcatca cctggaaact tgctagaaat tcagattccc aggcccttcc
      121 catacctact gaattagaaa atctggaggt ggggcctagg aaatctgcat ctttaaacta
      181 tccactccag gtgattctga tgtttgctca agtctgaaaa ccattgttct agcagcagga
      241 ttccctcaac catgtaactg aattcagcct agggcaccat ttctaaagat ggagaaccta
      301 ctggattctt cttaaactca atttaaaggc agggagtgtt tctaaatgtt tttcaacaat
      361 cttcatattt tgcaaaccac taatatcact acacaggccc gtctaactat taattaggaa
      421 aattaatgaa acccctggtg taataagagc taaatataac tgaatcactt acagtggccg
      481 cctgtggcat gaggcttttt gattaattgc tagccaacca cccttggagt tcactcctga
      541 ttaagacaac tgaccacctc tacagtgtag cttaagctaa cacacacata catcagagtg
      601 tactgttcat gtgagggttt ttaaagactc ttaaaattta ccttatcagg gcataattta
      661 aacactataa catgtttcca ttttaagtgt tcaggttaga ttttggcaaa tgtatacact
      721 cgtgtaacca ccatgccaat caagatataa catttcgatc acctagaaaa cacccttgtg
      781 ttcctttgag gtcagttacc tactcccacc acaccccagg ctaccatctg gcatagtagc
      841 taagttttgc ctgttctaga
//

GenBank-Updates@genbank.bio.net (04/03/91)

LOCUS       HUMALUAD     1433 bp ds-DNA             PRI       03-APR-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M62511
KEYWORDS    Alu repetitive element.
SOURCE      Human lymphoblast DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Bodrug,S.E., Holden,J.J.A., Ray,P.N. and Worton,R.G.
  TITLE     Molecular analysis of X-autosome translocations in females with
            duchenne muscular dystrophy
  JOURNAL   Unpublished (1991)
  STANDARD  full staff_review
BASE COUNT      476 a    193 c    258 g    502 t      4 others
ORIGIN      Chromosome X.
        1 gaattcttta tattaatttt ttgaagttgt aaataaaata gcatcagttc tacattgtta
       61 catttcagct taattcatat tcatttactg aaaatgggaa catttgaaaa atcatcatgg
      121 gcatttatgc tatgtagatt gttgattttt atagaaaaat ataaaaatat gaccagtttg
      181 attttcaaag tcttttctta gacatgtaaa tactaagcat tcaactcaac atatagagtt
      241 tttatttgag tattatttag gtggaattct attttaatga atacaataaa aaattgtaat
      301 tttgtctaaa agcctaaaat gccctagtta taatatgtat gatttcactg tttaacttcc
      361 tatttcatag ggttgctatt tataaccact tcactcaact ctggggggac ttagtgagat
      421 taaagacttc tgattcactt tgtatttgaa gaattttttt tcctccatct ttgctcagct
      481 agtggaatcc atgatgaatt ctcatctcca aggggtaagc agtttttagt aaagcccagt
      541 agctgactta tgactcctta gaaatagcat tgattccttc cttctcctgt gttttgtttc
      601 ctctagaatg atagaatcca tgtagacacg atccattatc atgcttaggt actggtaagc
      661 atgtaatgat tttagttttg ttcgctttaa gttatttgtg tcacaaatat ctgggatcat
      721 atcagagaaa taaataagca caattagcat tctacttgtt tgttatgact aaagctaggt
      781 tgaggaaaca gaaaaggacc agaggtcata tgaggatgaa gataatacta ggaacagcat
      841 gtttgggaga gtaacatctg gtagggntag cagattgggn nnagagaaca gaattttata
      901 gatggatatt ttggaggcaa gtagtttgag taatgattag tctaaggtgt tttctcatct
      961 gtgggtggct cgaaggaata gaggtgaagg tcagtttatt tgagaagttc tggaattata
     1021 aaactaagtt gaagtcaaag aaagtatagt agcaaataaa tagaataccc ttaaaaggaa
     1081 accaaatgaa aaataatcgt tactctcacc atatgcttgt gttcttatta gcaagaaatt
     1141 cttttaacca ctgtttttat aatatcttaa tgaaaaaata ctgaagcgta tgccatatta
     1201 aatccctctc tttatttcta gaaagggaat caaaggagaa aattcccatt ctgctatact
     1261 aaaagaccac taagtaaaga gcctattagt gtatgataaa tcccatagca atatacatta
     1321 tcattttaca gcttctttgt tgaaatgaat gtttgtatgt gttgaccata gagtgggata
     1381 aaaagttgaa attttgtttt gaaatatttt agaaatgcat agttgtactg cag
//

GenBank-Updates@genbank.bio.net (04/03/91)

LOCUS       HUMALUAE       36 bp ds-DNA             PRI       03-APR-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M62512
KEYWORDS    Alu repetitive element.
SOURCE      Human lymphoblast DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Bodrug,S.E., Holden,J.J.A., Ray,P.N. and Worton,R.G.
  TITLE     Molecular analysis of X-autosome translocations in females with
            duchenne muscular dystrophy
  JOURNAL   Unpublished (1991)
  STANDARD  full staff_review
BASE COUNT       11 a      7 c      4 g     14 t
ORIGIN      Chromosome 2.
        1 caacaatctt catattttgt atgttcctgt aagaca
//

GenBank-Updates@genbank.bio.net (04/03/91)

LOCUS       HUMALUAF       37 bp ds-DNA             PRI       03-APR-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M62513
KEYWORDS    Alu repetitive element.
SOURCE      Human lymphoblast DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Bodrug,S.E., Holden,J.J.A., Ray,P.N. and Worton,R.G.
  TITLE     Molecular analysis of X-autosome translocations in females with
            duchenne muscular dystrophy
  JOURNAL   Unpublished (1991)
  STANDARD  full staff_review
BASE COUNT       17 a      7 c      6 g      7 t
ORIGIN      Chromosome 2.
        1 aaagagaagg acatgttagc aaaccactaa tatcact
//

GenBank-Updates@genbank.bio.net (04/03/91)

LOCUS       HUMALUAG       36 bp ds-DNA             PRI       03-APR-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M62514
KEYWORDS    Alu repetitive element.
SOURCE      Human lymphoblast DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Bodrug,S.E., Holden,J.J.A., Ray,P.N. and Worton,R.G.
  TITLE     Molecular analysis of X-autosome translocations in females with
            duchenne muscular dystrophy
  JOURNAL   Unpublished (1991)
  STANDARD  full staff_review
BASE COUNT        7 a      9 c      7 g     13 t
ORIGIN      Chromosome 4.
        1 ctcatctcca aggggtaatg agtctccttt atttgc
//

GenBank-Updates@genbank.bio.net (04/03/91)

LOCUS       HUMALUAH       31 bp ds-DNA             PRI       03-APR-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M62515
KEYWORDS    Alu repetitive element.
SOURCE      Human lymphoblast DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (sites)
  AUTHORS   Bodrug,S.E., Holden,J.J.A., Ray,P.N. and Worton,R.G.
  TITLE     Molecular analysis of X-autosome translocations in females with
            duchenne muscular dystrophy
  JOURNAL   Unpublished (1991)
  STANDARD  full staff_review
BASE COUNT        8 a      3 c      8 g     12 t
ORIGIN      Chromosome 4.
        1 tattagaggt gtgtagtttt tagtaaagcc c
//

GenBank-Updates@genbank.bio.net (05/16/91)

LOCUS       HUMALUA      1800 bp ds-DNA             PRI       16-MAY-1991
DEFINITION  Human Alu repeat sequence.
ACCESSION   M29834
KEYWORDS    alu repetitive sequence.
SOURCE      Human DNA.
  ORGANISM  Homo sapiens
            Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
            Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE   1  (bases 1 to 1800)
  AUTHORS   Guo,L.-H., Yang,R.C. and Wu,R.
  TITLE     An improved strategy for rapid direct sequencing of both strands of
            long DNA molecules cloned in a plasmid
  JOURNAL   Nucleic Acids Res. 11, 5521-5540 (1983)
  STANDARD  simple staff_entry
FEATURES             Location/Qualifiers
     repeat_unit     1417..1693
                     /rpt_family="Alu"
BASE COUNT      563 a    376 c    365 g    496 t
ORIGIN
        1 tcatcaggat tgtttatatt gcagcattgc agtatgtgac gttaagaaga gctacaagat
       61 aatttaaaaa agtaaaagaa aaagaaagca ccacctttag aatatccaag agaaccacac
      121 ccactctaat cttttggcta ccaatttaca tccctctcca agcctcaatg ttctcatcta
      181 taaaatggga atatagtatc catcaaagtg ggttactgcg aggatgtgaa aatgccctgt
      241 aaaccttaaa acaatttata aatgagatta ttgctttttg tagaatactt ttttatgtga
      301 agccctctac ttcccttatc tcattttaca catacattca ttcttcaaga atttaaaaat
      361 acatacacag ctaccatttg ttagagtact tagactatgc aagatccata ttttgctata
      421 tttgaccctt gcactggccc tatgaggcag gtgccattcc ccacctcacc tgtcccatat
      481 ttcagttgaa gaggaagctc aatgaaaggt taaggaatac aaccaaggtc agtaataagc
      541 agagtcagta tcaaagactg ctctggagtg gacacttggt ctagattctg agtgctgatc
      601 acttgactac agtggctttc tgctgctact tgccaggagc cttgcagcca tccaaagagt
      661 tagcatacaa acaggcattc tgttagggtt gactttgtgt cctcccaaaa gaagatatat
      721 tagaatccta acccctgctt cctcagaatg tgatcttatt tggagacaga gcttgacaga
      781 ggttaagcaa attaaaatga agtcattaga atcgtctcta atttaataag actggcatcc
      841 ttataaaaag ggatgtggac acagagagaa aagcatagaa ggaagatgat gtgagaagac
      901 atagaaagag gacaaaaatc tacaagccaa ggagggaggc ctggatcaca tccttttctc
      961 atagccctta gaagaatcca ccctgctgaa accttgattg tggacttcta cccccagaac
     1021 tgtgaaaaat acatttctgt tgtttaagcc acccagttag tgcgactttg tttatggcag
     1081 ctttcacaac ctaatgccta ttctgaatcc tcttttctgg atgaggctct ggaagaggaa
     1141 gagattaggt gacttactca agaggtaggt gagatggctg agatttgcca ccccattttc
     1201 tgtccacgtg ctgcacattc attgctaaaa gaaaggctac tctggagcag gtatttcttt
     1261 tggttgtatt cactgtggtc cctggcattt atatcagtgt ctggcatatc ataaagcaat
     1321 acttgttgaa taaatgaatg aatgaatgca gatctttcta ccaacttacc cagtgtatca
     1381 cagctagatt aaaatgattt ttaaaaagca catcaggctg ggtacggtgg ctcattcctg
     1441 taatcccagc actttgggag gccgaggcag gtcgatcact tgaggtcagg agttcgagac
     1501 cagcctgacc aacatgtgaa acccgtctct actaaaaatt tagcagactg ggtggcagac
     1561 acctgtaatc tcagctactt gggaggctga ggcaggagaa tcacttgagc ctgggaggac
     1621 gaggttgaag tgagctgaga tcatgctact gcactccagc ctgggcaaca aagttagact
     1681 ccgcctaaaa aaaaaaaagc acatcatcct ggaacaagaa tttcaacaac ttacagtcac
     1741 tgtcagaaca aagagtttca tactttgtat tcaacttctt cccacaatca aagacttata
//