GenBank-Updates@genbank.bio.net (02/06/91)
LOCUS HUMALPHSAT 340 bp ds-DNA PRI 06-FEB-1991
DEFINITION Human alpha satellite DNA.
ACCESSION M55598 M38336
KEYWORDS alpha satellite.
SOURCE Human DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (sites)
AUTHORS Willard,H.F., Powers,V.E., George,J., Parikh,S. and Greig,G.M.
TITLE Molecular cytogenetics of alpha satellite DNA from chromosome 12:
Fluorescence in situ hybridization and description of DNA and array
length polymorphisms
JOURNAL Unpublished (0)
STANDARD full staff_review
REFERENCE 2 (bases 1 to 340)
AUTHORS Nobrega,M.P., Nobrega,F.G. and Tzagoloff,A.
TITLE COX10 codes for a protein homologous to the ORF1 product of
Paracoccus denitrificans and is required for the synthesis of yeast
cytochrome oxidase
JOURNAL J. Biol. Chem. 265, 14220-14226 (1990)
STANDARD simple staff_entry
BASE COUNT 100 a 59 c 70 g 111 t
ORIGIN Map position 12p11.1-12q11.1.
1 aattctcagt aacttatttg tggtgtgtgt attcaactca cagagttgaa ccttccttta
61 gacagagcag atttgaaaca ccctatttgt gcagtttcca gttggagatt tcaatcgctt
121 tgagaccaaa tgtagaaaag gaaacatctt cgtataaaaa ctagacagaa tcattctcag
181 aaactacttt gtgatgtgtg cgttcaattc acagagtata acctttcttt tgatggagga
241 gtttggagac actgtctttg taaagtctgc aagtggatat ttggacctct ttgaggcctt
301 cgttggaaac gggatttcct catataatat tacacagaag
//GenBank-Updates@genbank.bio.net (05/16/91)
LOCUS HUM18ASA 1364 bp ds-DNA PRI 16-MAY-1991
DEFINITION Human alpha satellite DNA.
ACCESSION M65181
KEYWORDS alpha satellite DNA; centromeric repeat; tandem repeat.
SOURCE Human, DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 1364)
AUTHORS Alexandrov,I.A., Mashkova,T.V., Akopian,T.A., Medvedev,L.I.,
Mitkevich,S.P., Yurov,Y.B. and Kisselev,L.L.
TITLE Chromosome-specific alpha satellites: Two distinct families on
human chromosome 18
JOURNAL Genomics (1991) In press
STANDARD simple staff_entry
FEATURES Location/Qualifiers
satellite 1..1364
/note="alpha satellite DNA"
/partial
BASE COUNT 390 a 241 c 308 g 425 t
ORIGIN Chromosome 18 cen. D18Z1 (HGM symbol)
1 ctgcagcgtt ctgagaaaca tctttgtgat gtttgtattc aggacacaga gttgaacatt
61 ccctatcata gagcaggttg gatcactcct tttgtagtat ctggaagtgg acatttggag
121 cgctttcagg cctattttgg aaagggaaat atcttcccgt aacaactatg cagaagcatt
181 ctcagaaact tgtttgtgat gtgtgccctc tactgacaga gttgaacctt tcttttcata
241 gagcactttt gaaacactct ttttgtagaa tctgcaagag gatatttgca tagctttgag
301 gatttcgtgg gaaacgggat tgtcttcagg caaagtctag acagaagcat tctcagaaac
361 ttctttggga tgtttgcatt caagtcacag agtagaacat tccctttggt agagcaggtt
421 tgaaacactc tttttgtagt atctggaagt ggacatttgg agcgctttca ggcccatgtt
481 ggaaagggaa atatcttccc gtaacaacta ggcagaagca ttctcagaaa cttatttgag
541 atgtgtgtac tcaactaaga gaattgaacc tccgttttga aggagcagtt ttgaaacact
601 ctttttctgc aatctgcaag agtatatttg cctagccttg aggatttcgt tggaaacggg
661 attgtcttca gagaaaatct agagagaagc attctcagaa acttctttgg gatgcttgca
721 ttcaagtcac agagtagaac attccctttg gtagagcagg tttgaaacac tcttttgtag
781 tatctggaag tggacatttg gagcgctttc aggcctacgt tggaaaagga aatatcttcc
841 cataacaact agacagaagc attctcagaa actagtttct gatgtgtgtc ctcaactaac
901 agagttgaac atttctttag acagaacagt tttgaaacac tctttttgtg gaatctgcaa
961 gtggctattt ggctagattt gaggatttcg ttggaaacgg gattacatat aaaaagcagt
1021 cagcagcatt ctcagaaagt tctttgtgat gattgcattc aagtcacaga attgaacatt
1081 ccctttcaca gagcaggttt gaaacactct ttttgtagtg tgtgtaagtg gacatttgga
1141 gcacttaccg gcctaaggtg aaaaaggaaa tatcttccca taaaaactgg acagaagcat
1201 tctcagaaac ttactcgtga tgtgtgtcct caactaaagg agtagaacct ttcttttcat
1261 agagaagttt tgaaacgctc tttttgtgaa atctgcaagt gaatatttgg ctggttttga
1321 ggatttcgtt ggaagcggga attcatacaa attgcagact gcag
//GenBank-Updates@genbank.bio.net (05/16/91)
LOCUS HUM18ASB 515 bp ds-DNA PRI 16-MAY-1991
DEFINITION Human alpha satellite DNA.
ACCESSION M65182
KEYWORDS alpha satellite DNA; centromeric repeat; tandem repeat.
SOURCE Human, DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 515)
AUTHORS Alexandrov,I.A., Mashkova,T.V., Akopian,T.A., Medvedev,L.I.,
Mitkevich,S.P., Yurov,Y.B. and Kisselev,L.L.
TITLE Chromosome-specific alpha satellites: Two distinct families on
human chromosome 18
JOURNAL Genomics (1991) In press
STANDARD simple staff_entry
FEATURES Location/Qualifiers
satellite 1..515
/note="alpha satellite DNA"
/partial
BASE COUNT 158 a 89 c 110 g 158 t
ORIGIN Chromosome 18 cen.
1 ctgcagatgg atattcggat agctctgagg atttcgttgg agacgggaat acataaagaa
61 agtagacagc agcattctcg ggagattctt tgtgatgttt gctttgaagt cacagagttg
121 aatattccct tcaatagagc aggtttgaaa cactctttct gtagtatctg gaagtggaca
181 tttcgatcga tttcaggcct atgttgaaaa aggaaatatc ttaacataaa aactagacag
241 aagcattctc agaaacgtct ttgtgatgtg tgtcctcaac taacagagtt caacctttct
301 tatgatacag cagtttggaa acactctttt tatagaattt gcaagttgat acatggatag
361 ccctaactat ttcgttggaa acgggaatat cttcacataa aacctagaca gaagcactct
421 cagaaactac tttgtgatat ctgcattgat atcagagagt tgaatattcc ctttctaagg
481 gcaggcttga aagcgtattt tcgtggaatc tgcag
//