GenBank-Updates@genbank.bio.net (05/17/91)
LOCUS SLMTP2 1679 bp ds-DNA PLN 17-MAY-1991
DEFINITION Physarum polycephalum retrotransposon-related element Tp2
ACCESSION X52770
KEYWORDS retrotransposon.
SOURCE Physarum polycephalum DNA.
ORGANISM Physarum polycephalum
Eukaryota; Plantae; Thallobionta; Myxomycota; Myxomycetes;
Myxogastromycetidae; Physarales; Physaraceae.
REFERENCE 1 (bases 1 to 1679)
AUTHORS Rothnie,H.M.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 1679)
AUTHORS McCurrach,K.J., Rothnie,H.M., Hardman,N. and Glover,L.A.
TITLE Identification of a second retrotransposon-related element in the
genome of Physarum polycephalum
JOURNAL Curr. Genet. 17, 403-408 (1990)
STANDARD full automatic
COMMENT Data kindly reviewed (22-OCT-1990) by Rothnie H.M.
From EMBL 26 entry PPTP2; dated 19-NOV-1990.
FEATURES Location/Qualifiers
misc_feature 1..185
/note="LTR"
misc_feature 186..200
/note="put. tRNA-binding site"
misc_feature 1226..1267
/note="nucleic acid-binding motif"
misc_feature 1484..1492
/note="polypurine region"
misc_feature 1493..1679
/note="LTR"
BASE COUNT 510 a 257 c 452 g 460 t
ORIGIN
1 tgttaaaata aatgggatgt gtaaagttta atgtatcatt tttggggaaa atgccccttt
61 gctcatgtaa aaacttgtat gcaaaaacgt gcttttcatg caaattaaaa cattcttgta
121 cacagtctgt tcccttgcca cacctctcta agtgtttccc actctaaggt ccttcccttc
181 caacaggtta tgggcccttg cctctaatcc tgagcatagt agcacacatt gcacatgatt
241 gcagtgtata ttatttagct tttgtgtcac acatacatgc aaagcattct ctctcgcgtt
301 tcgtctcatc tggagcttat ttcacaaggt ttgctctgca tacagattgt ggtgagaggg
361 gaagaggagt gggaacaaag ggttaaggga agttaagaag agttaaggtg gaatgcatag
421 gaatcacaca cacacacttt gcacaactca ttgctccaat atgtttgggc atgagcacct
481 cataggaggg gttgaaatgg ggcaatctca ccttaggggg gaaaggggag tgtgtgtgga
541 aagaggagaa gaagagaaag aagaaagaag acaagtggag agggtgaaat tcccttcaat
601 ggagacatgt ggatggggtg aaatttccca ctaggagaca aatgtatgag gtgcaattcc
661 gcacaaagaa gataagtgga gagggtgcaa tttccttcaa ggagagcaga agtttagggg
721 gggattagta gagaaaatag tcagttggaa tttgggtgaa gagggtaaag ttgttgcaag
781 gagaagagag ataactttaa cactttttta ccagatatca aagaatttgg ttttccagca
841 tggtgataat tatggaattt ggaattggag aagtatttgg aagagtttga gggtgtagtg
901 ggggatatgg aaaggagagg gcatgtggta gtggaagtgg agagagccat gttccttctt
961 tgtagtatac cagaggactg gggatttttg aggtctcaag ttttcttgaa gtaggggtat
1021 aagaatttga cggcagaaaa agtgaaaaca gtattgaggg agtacattta gtttgaagtt
1081 gagagaagtg gcagacgaag gaaaaagtga aggggggagt gatagagcat tgtatggaag
1141 aggaaaaggg aaaagagagg caaaggggga gaagtgtgag aagtgcaaaa ggtggagaca
1201 tagtgcaaaa gagtgcagca caaagtgtta tgcatgtggg aagtttggcc atgtggtata
1261 caggtgccca gaggagaaca agaaatccaa ggagaagtca accagaaagg tctctgcttt
1321 cacctacctg ggagatcctc tttctttatg agtgaccaag gttgtttgct cccttaccag
1381 aatatcctta atgaacactg gctttgggaa ggtcactttg cttcttgttt tatgtgacac
1441 agataccttt tacaggtgga acttttttct ggacattaat ccttgagggg gagtattgga
1501 ataaatgaga tgtgcaagac ttaatgtatt atttttaggg aaaatgcccc ttcgctcatg
1561 taaaaacttg tatacaaaaa catgcttttt gcacaaatta aaacattctt gtgtgcagtc
1621 tgttcccctt gccatgcctc tctaagtttt tcccactcta aggtccttcc cttccaaca
//