GenBank-Updates@genbank.bio.net (05/18/91)
LOCUS PT4RIIA 2834 bp ds-DNA PHG 18-MAY-1991 DEFINITION Bacteriophage T4 rIIA gene and ORF rIIA.1. ACCESSION X52686 X00905 KEYWORDS membrane protein; rIIA gene. SOURCE Bacteriophage T4 DNA. ORGANISM Bacteriophage T4 Viridae; ds-DNA nonenveloped viruses; Myoviridae. REFERENCE 1 (bases 2736 to 2834) AUTHORS Pribnow,D., Sigurdson,D.C., Gold,L., Singer,B.S. and Napoli,C. TITLE rII cistrons of bacteriophage T4 JOURNAL J. Mol. Biol. 149, 337-376 (1981) STANDARD full automatic REFERENCE 2 (bases 1971 to 2735) AUTHORS Sugino,A. and Drake,J.W. TITLE Modulation of mutation in bacteriophage T4 by a base-pair change a dozen nucleotides removed JOURNAL J. Mol. Biol. 176, 239-249 (1984) STANDARD full automatic REFERENCE 3 (bases 1 to 2834) AUTHORS Brody,E.N. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 4 (bases 1 to 2834) AUTHORS Daegelen,P. and Brody,E. TITLE The rIIA gene of bacteriophage T4. I. Its DNA sequence and discovery of a new open reading frame between genes 60 and rIIA JOURNAL Genetics 125, 237-248 (1990) STANDARD full automatic COMMENT *source: strain=isolate pTB101; See also <M19728>; From EMBL entry ECRIIA; dated 28-JAN-1991. FEATURES Location/Qualifiers CDS <1..275 /note="for complete sequence see M19728" /gene="gene 60" /evidence=EXPERIMENTAL /codon_start=1 prim_transcript 313..>2724 /note="+1 of P1 early promoter" /evidence=EXPERIMENTAL CDS 333..536 /note="ORF rIIA.1" /codon_start=333 prim_transcript 405..>2724 /note="+1 of P2 early promoter" prim_transcript 473..>2724 /note="+1 of Pm middle promoter" /evidence=EXPERIMENTAL prim_transcript 474..>2724 /note="+1 of Pm middle promoter" /evidence=EXPERIMENTAL CDS 547..2724 /gene="rIIA" /evidence=EXPERIMENTAL /codon_start=547 conflict 2392..2392 /note="replace (2392,'')" /citation=[2] conflict 2503..2503 /note="replace(2350,'')" /citation=[2] BASE COUNT 928 a 427 c 557 g 922 t ORIGIN 1 gaattcgctt tgtcaaaact cctgtaatca tcgctcaggt cggtaaaaaa caagaatggt 61 tttatacagt cgctgaatat gagagtgcca aagatgctct acctaaacat agcatccgtt 121 atattaaggg acttggctct ttggaaaaat ctgaatatcg tgagatgatt caaaacccag 181 tatatgatgt tgttaaactt cctgagaact ggaaagagct ttttgaaatg ctcatgggag 241 ataatgctga ccttcgtaaa gaatggatga gccagtagtt tactttacca caaggatgtg 301 gtataattaa ttgggcaaat gaggatattg aaatgaaatc atataaagta aatttagaac 361 tttttgataa agcagttcat cgagaatata gaatcattca acgctttttc gatatgggag 421 aagccgaaga atttaaaacc cgctttaaag atattagaga taaaattcaa tccgacaccg 481 caactaaaga tgaactacta gaagttgctg aagttattaa gcgtaatatg aattaatgag 541 gaaattatga ttatcaccac tgaaaaagaa acaattcttg gtaatggttc taaatcaaaa 601 gcatttagca tcacagcatc tcctaaagta tttaaaattc tgtcatctga tttgtataca 661 aacaagattc gcgcagtagt ccgtgaattg attactaaca tgattgatgc tcatgcactt 721 aatggaaatc ctgaaaaatt tatcatacaa gttcctggac gtttagaccc acgatttgtt 781 tgtcgagatt ttggtccggg tatgagtgat tttgatattc aaggtgatga taattctcct 841 gggttgtata attcatactt cagttcatct aaagctgaat ctaatgactt tattggcgga 901 tttggtttag gttctaaatc tccgtttagt tatactgata cgtttagtat tacttcgtat 961 cataaaggtg aaattcgtgg ttatgtagct tacatggatg gtgatggtcc acagattaaa 1021 cctacattcg taaaagaaat gggtccagat gataaaactg gtattgaaat cgtagttcca 1081 gttgaagaaa aagactttag aaactttgct tatgaagttt cttatatcat gcgaccgttc 1141 aaagatttgg ctatcattaa tggtcttgac cgcgaaattg attattttcc ggattttgat 1201 gactattacg gtgtaaatcc agaaagatac tggcctgatc gtggtggatt atatgctatc 1261 tacggtggta ttgtttatcc tatcgatggt gttattagag accgtaactg gctaagcatt 1321 cgcaatgaag tgaattacat taagtttcca atgggttcac ttgatattgc tccatctcgc 1381 gaggctcttt cactggatga tcgcactcgt aaaaatatta ttgaacgagt taaagaactc 1441 agtgagaaag catttaatga agatgtaaaa cgatttaaag aatctacatc tcctcgtcac 1501 acatatcgtg aattgatgaa gatggggtat tctgctcgag attatatgat tagtaattca 1561 gtcaaattca cgactaaaaa tctgtcatat aaaaagatgc agagcatgtt tgaacctgac 1621 agtaagttat gcaacgcggg agttgtgtat gaagtaaatc ttgaccctcg actgaagcgc 1681 attaagcaaa gtcatgaaac ttcagccgtt gcatcaagtt atcgtctgtt tggtattaat 1741 acaacaaaaa ttaatatcgt tattgataat attaaaaatc gtgttaatat tgtccgtgga 1801 ttagcacgtg cgttagatga tagtgaattt aataacactt tgaatattca tcataacgaa 1861 cgtcttctgt ttattaatcc agaagtagaa tcgcagattg atttgcttcc tgatattatg 1921 gcgatgtttg aaagtgatga agttaacatt cattatttgt cagaaattga agctttagta 1981 aaaagttata ttccaaaggt agttaaaagt aaagctcctc gtcctaaagc tgctacagcg 2041 tttaagtttg aaattaaaga cgggcgctgg gaaaagagga attatttacg cctcacatca 2101 gaagcagatg aaattactgg ttatgtagcg tatatgcatc gttctgatat tttctctatg 2161 gatggtacta catctctttg tcatccatct atgaatattt tgattcgtat ggctaatctt 2221 attggcatta atgaatttta tgttattcgt ccgcttttac agaaaaaggt aaaagaactc 2281 ggtcagtgcc aatgtatttt tgaagctttg cgtgatttat atgtagatgc ttttgatgat 2341 gtagattatg ataagtatgt aggttattca agttcagcta aacgatatat tgataaaatt 2401 atcaagtatc ctgagttaga ttttatgatg aagtacttca gtatagatga agtttctgaa 2461 gaatatacac gactcgctaa tatggttagt tcattacagg gtgtatattt taatggtgga 2521 aaagatacca tcggtcatga catttggaca gtaactaatc tttttgatgt attatcaaat 2581 aatgcttcaa aaaacagtga taaaatggtt gctgagttta ccaagaaatt ccgtattgtt 2641 tccgacttca tcggttatcg caactcttta agtgatgatg aagtttccca aatcgctaaa 2701 actatgaagg cccttgcggc ctaataagga aaattatgta caatattaaa tgcctgacca 2761 aaaacgaaca agctgaaatt gttaaactgt attcaagtgg taattacacc caacaggaat 2821 tggctgattg gcaa //