GenBank-Updates@genbank.bio.net (05/18/91)
LOCUS DROALU1 234 bp ds-DNA INV 18-MAY-1991
DEFINITION Drosophila melanogaster Alu I repetitive sequence located near
ribosomal genes
ACCESSION X01548
KEYWORDS Alu repetitive sequence; repetitive sequence.
SOURCE Drosophila melanogaster DNA.
ORGANISM Drosophila melanogaster
Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae.
REFERENCE 1 (bases 1 to 234)
AUTHORS Miller,J.R., Hayward,D.C. and Glover,D.M.
TITLE Transcription of the non-transcribed spacer of Drosophila
melanogaster rDNA
JOURNAL Nucleic Acids Res. 11, 11-19 (1983)
STANDARD full automatic
COMMENT The author suggests that ribosomal genes spacer sequences
containing Alu I fragments can be partially co-transcribed.
Sequence of rDNA transcription initiation region in Long, E.O.,
Rebbert, M.L. and Dawid, I.B. (1981). Proc. Natl. Acad. Sci. U.S.A.
78, 1513-1517.
Data kindly reviewed (22-OCT-1985) by D.M. Glover
From EMBL 26 entry DMALU1; dated 06-JUL-1989.
FEATURES Location/Qualifiers
misc_feature 1..234
/note="Alu I fragment"
misc_feature 10..62
/note="sequence homology with rDNA transcription
initiation region"
unsure 24..25
/note="AC may be ATAC"
precursor_RNA 32..>234
/note="pot. 5' end of primary transcript of rDNA"
unsure 45..46
/note="TT may be TCT"
misc_feature 70..162
/note="sequence homology with rDNA transcription
initiation region, 5' of start site"
unsure 73..74
/note="TA may be TTA"
unsure 100..101
/note="TA may be TAA"
unsure 133..133
/note="T may be A"
unsure 156..157
/note="GA may be GGA"
unsure 210..210
/note="G may be T"
BASE COUNT 83 a 27 c 43 g 81 t
ORIGIN
1 ctgttctacg acagagggtt caaactacta taggtaggca gtggttgccg acctctcata
61 ttgttcaaaa cgtatgtgtt catatgattt tggcaattat atgagtaaat taaatcatat
121 acatatgaaa attaatattt attatatgta taagtgaaaa atgttgaaat attcccatat
181 tctctaagta ttatagagaa aagccatttg agtgaatgga tatagtagtg taag
//