GenBank-Updates@genbank.bio.net (05/18/91)
LOCUS DRORUDG1 2328 bp ds-DNA INV 18-MAY-1991
DEFINITION D. melanogaster rudimentary gene 5'-flank, exons 1 and 2 (partial)
coding for carbanyl phosphate synthetase (EC 2.7.2.9), aspartate
transcarbamylase (EC 2.1.3.2) and dihydro-orotase (EC 3.5.2.3)
ACCESSION X03875
KEYWORDS aspartate transcarbamylase; carbamoyl-phosphate synthetase;
dihydro-orotase; inverted repeat; rudimentary gene; synthetase.
SOURCE Drosophila melanogaster DNA.
ORGANISM Drosophila melanogaster
Eukaryota; Animalia; Metazoa; Arthropoda; Uniramia; Insecta;
Pterygota; Neoptera; Holometabola; Diptera; Brachycera;
Cyclorrhapha; Schizophora; Drosophiloidea; Drosophilidae.
REFERENCE 1 (bases 1 to 2328)
AUTHORS Freund,J.N., Vergis,W., Schedl,P. and Jarry,B.P.
TITLE Molecular organization of the rudimentary gene of Drosophila
melanogaster
JOURNAL J. Mol. Biol. 189, 25-36 (1986)
STANDARD full automatic
COMMENT EPD; 11034; Dm[r] CPSase,ATCase. SWISS-PROT; P05990; PYR1$DROME.
From EMBL 26 entry DMRUDG1; dated 05-DEC-1990.
FEATURES Location/Qualifiers
CDS join(1022..1789,1854..>2328)
/note="rudimentary protein fragment"
/codon_start=1022
repeat_unit 710..717
/note="inverted repeat A"
repeat_unit 718..725
/note="inverted repeat A'"
repeat_unit 719..725
/note="inverted repeat B"
repeat_unit 726..732
/note="inverted repeat B'"
promoter 883..886
/note="CAAT-box"
repeat_unit 922..927
/note="inverted repeat C"
repeat_unit 928..933
/note="inverted repeat C'"
promoter 972..978
/note="TATA-like sequence"
precursor_RNA 1011..>2328
/note="primary transcript"
mRNA 1011..1789
/note="exon 1"
intron 1790..1853
/note="intron I"
mRNA 1854..>2328
mRNA 1854..>2328
/note="exon 2"
BASE COUNT 603 a 559 c 580 g 586 t
ORIGIN
1 gaattcagtt gttcgacttt gattttcacg acgttaattg gagccaattt gcaagcaaac
61 acagttaaat gctcaaacta aacatatccg agcagtgcga agttaaccag ctctaaaagc
121 ggtgtcgcaa agtaaacaaa tcaagttgtc aatcgaatta aagtcgaaac caaaacgtgt
181 tcacaactac aagtgcagca aagagagagc ttcgcttgaa agtacacgga atcgtaagtg
241 agctgtagtt gtaacgggtg cagatgggaa aaggataact tgatggcgat actaatgcat
301 cgtagcttaa ggattctcag ttggttaatc ctcaattcct gcccaaagtc caattcaaag
361 ttaaagtcaa tgttattgtt attctcattt gctgaccgaa ccggtttcca attggatcca
421 aacttctcac acgtgcttac gcacacacaa aacgcaccct ctcacactcg ctcttcctct
481 ttcttctccg ccgctagtcg tcgtgtaaac aaaccgtgaa tggcaatatc aaatgacaac
541 agcaacttga aacgcttgat aagcagtgtc cattcccaat cagaaccgtg ttgtgccccg
601 ctcaacatgt tgccagacag ttaaatacat gcatacattc atctatcgcg gcttcctatt
661 ggattctttg tatattttct tgggccggca aactgtgtgc gtgtgacggt gtgtttataa
721 acacatgtgt tttttgaaca agataacctg tggaattata ttacattaca tttaaaatcg
781 aggtatgcaa cggcctctgc gtatacatat agcatagtca tagcatatac tcattaagta
841 aagttcccag agtcgccgaa tattgttatc agattttcga ctcaatattg tgtctacttg
901 ccttcgtaga gatatgatct tttaattaat taactttgct cgtttattta agacggtttt
961 cgagtgacag gtactaaaga ataccctatg gtttccaatc ctccccagca actcgtccaa
1021 tatggcctct acggactgtt acctcgcact ggaggatggc acagtgttgc ccgggtactc
1081 ctttggctac gttccctcgg agaatgaatc caaagtgggt gttggtggcg aggtggtctt
1141 ccaaacgggc atggttggct acacggaggc gctcacggat cgatcgtaca gtgctcagat
1201 cctggtgctt acctatccac tgatcggtaa ctatggggta ccagcgccgg atgaggacga
1261 gcacggactg ccgctgcact tcgagtggac tgaaggacgt cgtccaggcc agccgccttg
1321 gtggtgggcg aggctggcta agaggcagct cttcaactgg cgcaaatgga agacgctgcc
1381 cgagttggct gaagcgacga caaggtgccc ggaattcagc attgatactc gagccctgac
1441 caaaaaactg agggagcagg gaagcatgct aggcaagatt gtctacgaga aaccgccggt
1501 cgaaggggct atgcccaagt ccagtttcgt agatccgaac gttcaggatt tggccaagga
1561 gtgcagcgtt aaggagcgac aagtgtacgg taatcccaat ggcaagggac cacggatcgc
1621 cattctggac tgtggactga agctcaacca gttgcgctgc ctgctgcaac gtggcgcctc
1681 ggtgaccttc gtcccctgga gcgctcgtct cgaggatgag cagttcgacg ccctctttct
1741 gtctaacgga cctggtaatc ccgagagctg cgaccagatc gtccaacagg tgggtcacaa
1801 ttggatcatt tgggtagaat ataatgctta tttaactaat cttttgtttc taggtgagaa
1861 aagtgattga ggagggtcaa aagccagtct ttggaatatg tctgggtcac cagctgctgg
1921 cgaaggcaat cggctgctct acttacaaaa tgaagatcgg caatcgagga cacaatctgc
1981 cctgcctgca ccgagcaact ggacgctgcc tgatgacgtc gcagaatcac ggatacgcgg
2041 tcgatttgga gcagttgccc gacggctggt cggagctatt tgtgaatgcc aacgacggcg
2101 accaacgagg gcattgtcca tgccagcaag ccctactttt cggttcagtt ccatccggag
2161 catcatgctg gaccgcagga cacggagttc ctgttcgatg tctttatgga gagcattcaa
2221 cagaaggatt tgaccattcc gcagctgatc gagcagcgac tgcgtccgac tacgcttgcc
2281 atagattcgg ctccagtgat gccgcgcaaa gtcctaatcc tgggatcc
//