GenBank-Updates@genbank.bio.net (05/18/91)
LOCUS TETRDNAG 10315 bp ds-DNA INV 18-MAY-1991
DEFINITION T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S
rRNA.
ACCESSION X54512
KEYWORDS 17S ribosomal RNA; 26S ribosomal RNA; 5.8S ribosomal RNA;
rdn A+ gene.
SOURCE Tetrahymena thermophila DNA.
ORGANISM Tetrahymena thermophila
Eukaryota; Animalia; Protozoa; Ciliophora; Oligohymenophora;
Hymenostomata; Hymenostomatida; Tetrahymenina; Tetrahymenidae.
REFERENCE 1 (bases 1 to 10315)
AUTHORS Engberg,J.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (sites)
AUTHORS Engberg,J. and Nielsen,H.
TITLE Complete sequence of the extrachromosomal rDNA molecule from the
ciliate Tetrahymena thermophila strain B1868VII
JOURNAL Nucleic Acids Res. 18, 6915-6919 (1990)
STANDARD full staff_review
COMMENT *source: strain=B1868VII; developmental stage=rearranged
(amplified); **map: position=extrachromosomal;
Data kindly reviewed (24-DEC-1990) by Engberg J.
From EMBL 26 entry TTRDNAG; dated 10-JAN-1991.
FEATURES Location/Qualifiers
rRNA join(4749..7009,7423..8508)
/product="26S rRNA"
/gene="rdn A+"
prim_transcript 1887..8522
/gene="rdn A+"
rRNA 2535..4287
/product="17S rRNA"
/gene="rdn A+"
rRNA 4418..4571
/product="5.8S rRNA"
/gene="rdn A+"
misc_feature 6342..6345
/note="hidden break region"
intron 7010..7422
BASE COUNT 3586 a 1617 c 2076 g 3036 t
ORIGIN
1 gtttttttgc tttttgttgt tagttttata gccttcagca ctatgttgtt gaattttacc
61 ttcgaaaatc acttaaaatt gagtaataat tgggtttaaa atttaaattt gagtagataa
121 gaattagatg tttatattct gctaatttca ctggtgaaaa tgtagcaaat agaaattatt
181 ttaatctaat aaactagcaa atagtattta aaacaaaaat atttgttttt tatgttgtaa
241 aatgttttaa attagataaa atttacaaat ttacaaattt tcaagcaaaa taggttctaa
301 aaaatgagaa aatattacat attttagcta tttgactact ttaatgctag taaattaaaa
361 tgaatttaat tcattttcac tttaaaacac ttattttaat aaaatatatg attttaaaat
421 gataaaatat tttttaagag gtaaatttaa gaaattagtt aaattttaaa gaaaaagcat
481 ctaaaaatgg acaaaaatga agtatttcct ttttttatac atttaaatgc tagaaaattt
541 aagtaaaaca tttataaata aaagtaaaat agttttagga atatgagtaa atagtttttt
601 ttatgtaaaa aacattttat caatttcatt tattcatttt agttaaattt ttcattcaca
661 aaaaactttt ttttggtaaa ataaagactt tataaagata acttaaagaa aaagtttatc
721 tagaattaaa aatattgatt ttgaaaattg ctcattagat atttttttgg caaaaaaaaa
781 aacaaaaata gtaaaaaatc actttttttg agagttgaaa aaaagactta gaaaaaattt
841 taaaagtgta aaaaaagact tagagaaaaa atcaaaaaga gataaaaaga cttagagaaa
901 atttataaat taaaaatgat agaaaagtaa aatttatttt atatttttta atcatttaaa
961 tgctagtaaa tttaaataaa acatatataa aaaaacataa aacaatttta acagcatgcg
1021 tatatcattt tttatatgta aaaaacattt tatcaatttc atttattcat tttagttaaa
1081 ttttacattc aaaataaatt ttttttgatt aaataaagag ttataaagag aacttaaaga
1141 aaaagtttat ctagaattaa aaatattgat tttgaaaatt gctcattaga aatttttttg
1201 gcaaaaaaaa aaacaaaaat agtaaactta gaaaaatttt tgaaaaatga aaaaaaaaga
1261 cttagagaaa aaaatcaaaa agtgaaaaaa gacttagaaa aatttttaaa aatgaaaaaa
1321 tgatttagga gaaattttga gattgcgctt agattttgtg tgaagccact tacaaaaaat
1381 gagcggactc gctcaaatat ttaagtggac tcgcataaaa atgagtggag tcactaaaaa
1441 aattaagtga actcacttaa aaatgagtgg agccactcaa aaaattaagc ggactcgctt
1501 aatattcgcg gagttaaaca aaaataagtg gactcacaga aaaattaagc ggattgcgct
1561 aaaaaatgag tggactcact caaaaatgaa gcagactcgc ttaaaaatga gtggagccac
1621 tcaaaaagtt cagcagagcc acttaaaaat ttagcttaaa atcagctcta aattaaatta
1681 gacttagtga aaaatagcga aaatgaaaaa aatgaaaaaa tgaatgaaaa ctgaaaaatt
1741 tacaagggat tgaaaatttt ggcagagtct tttttttggc aaaaaaaaaa acaaaaatag
1801 taaaccttcc gaactttttt gactttgaga aaaattcttt ggcaaaaaaa ataaaaataa
1861 tatcaggggg gtaaaaatgc atatttaaga aggggaaaca tctccggatc aaaaataaaa
1921 tatcagctcg atttgagctt cagtaagatt tccttttggg caaccaagga taacgataat
1981 gaagcgctaa ctgagcagac gtttttctct atggcttcgg cttttagtcg atggccgctg
2041 agggtctgtt gaaggttttt ctggattaag gctcgtatta gagcaaatgg cctgactgaa
2101 attttcatga aggctgtaaa ttcactgcaa agcttcgcag aaacttttcc cagtgacact
2161 tgttgtatcg atatctatgc agatattgtt acaaataacg caacacgcta gtactgttat
2221 aaatcggtga aatcgcagat gttattaaca gctagcaaca aagttgacta gagtcgaaga
2281 gatgcgatag agttttctca ttgtgccttc gaagatttta gcaactagaa gaaactaata
2341 gtaaacgaaa cgatgcggga tctatgtata aagcttaatc taacgatata gctgagtact
2401 gatctattac aacgcgtcag ttctcgatga actattaatc ttttgtgaac caaccttttg
2461 gaacactatt caaaaaatga gcaagctgtt ggaagatgca aatcggaaaa tagcgagcaa
2521 attttgagga tagtaacctg gttgatcctg ccagttacat atgcttgtct taaatattaa
2581 cccatgcatg tgccagttca gtattgaaca gcgaaactgc gaatggctca ttaaaacagt
2641 tatagtttat ttgataatta aagattacat ggataaccga gctaattgtt gggctaatac
2701 atgcttaaaa ttccgtgtcc tgcgaccgga acgtatttat tagatattag accaatcgca
2761 gcaatgtgat tgagatgaat caaagtaact gatcggatcg aggtttacct cgataaatca
2821 tctaagtttc tgccctatca gctctcgatg gtagtgtatt ggactaccat ggcagtcacg
2881 ggtaacggag aattagggtt cgattccgga gaaggagcct gagaaacggc tactacaact
2941 acggttcggc agcagggaag aaaattggcc aatcctaatt cagggagcca gtgacaagaa
3001 atagcaagct gggaaactta cgtttctacg gcattgaaat gagaacagtg taaatctctt
3061 agcgaggaac aattggaggg caagtcatgg tgccagcagc cgcggtaatt ccagctccaa
3121 tagcgtatat taaagttgtt gcagttaaaa agctcgtagt tgaacttctg ttcaggttca
3181 tttcgattcg tcgtgtgaaa ctggacatac gtttgcaaac taaaatcggc cttcactggt
3241 tcgacttagg gagtaaacat tttactgtga aaaaattaga gtgttccagg caggttttag
3301 cccgaataca ttagcatgga ataatggaat aggactaagt ccattttatt ggttcttgga
3361 tttggtaatg attaataggg acagttgggg gcattagtat ttaatagtca gaggtgaaat
3421 tcttggattt attaaggact aactaatgcg aaagcatttg ccaaagatgt tttcattaat
3481 caagaacgaa agttagggga tcaaagacga tcagataccg tcgtagtctt aactataaac
3541 tataccgact cgggatcggc tggaataaat gtccagtcgg caccgtatga gaaatcaaag
3601 tctttgggtt ctgggggaag tatggtacgc aagtctgaaa cttaaaggaa ttgacggaac
3661 agcacaccag aagtggaacc tgcggcttaa tttgactcaa cacggggaaa ctcacgagcg
3721 caagacagag aagggattga cagattgaga gctctttctt gattctttgg gtggtggtgc
3781 atggccgttc ttagttggtg gagtgatttg tctggttaat tccgttaacg aacgagacct
3841 taacctgcta actagtctgc ttgtaaataa caggttgtac ttcttagagg gactattgtg
3901 caataagcca atggaagttt aaggcaataa caggtctgtg atgcccctag acgtgctcgg
3961 ccgcacgcgc gttacaatga ctggcgcaaa aagtatttcc tgtcctggga aggtacgggt
4021 aatcttatta ataccagtcg tgttagggat agttctttgg aattgtggat cttgaacgag
4081 gaatttctag taagtgcaag tcatcagctt gcgttgatta tgtccctgcc gtttgtacac
4141 accgcccgtc gcttgtagta acgaatggtc tggtgaacct tctggactgc gacagcaatg
4201 ttgcggaaaa ataagtaaac cctaccattt ggaacaacaa gaagtcgtaa caaggtatct
4261 gtaggtgaac ctgcagatgg atcattaaca caattaacaa accttaactt atgtactttc
4321 gaagagaact tcggttttct tcgaggtttt attgtcacac ctagtgtgaa taaaaatttt
4381 tcatatgtct aagatctgga taacatccaa aacgaaaaga aaactttcaa cggtggatat
4441 ctaggttccc gtgacgatga agaacgcagc gaaatgcgat acgcaatgcg aattgcagaa
4501 ccgcgagtca tcagatcttt gaacgcaagt ggtggaggtg taaaaacctt catgtttgtt
4561 tcagtgtgga aaggaatcac gcatcttaat gcgattgaag ccgtcaaaag cttctctcgt
4621 taaacgtgat gggtggtcga gcaatcgccg ccagaacgaa gtagtcacat tccagtaatg
4681 tgaacattcg ttcaggcatc aaggcgaatg ctcactatgc tactcataga aaaattacat
4741 ttttctcact acacctgaaa caagcaagat tacccgctga acttaagcat atcagtaagc
4801 ggaggaaaag aaactaacta ggatagcccc agtaatggcg aatgaacagg ctaaagctca
4861 aagtgaaaat ctgaagtggt caacacaaca gaattgtaat ctaaagggtc aacctgaaac
4921 taagctcctc tcataagttc cttgggacag gacgtcaaag agggtgacaa ccccgtagtc
4981 ggagaggaag gctggtgtaa gggagatttc aaagagtcgg gttgtttgga attgcagccc
5041 taagtgggag ataaacttct tctaaagcta aatatacacg ggagaccgat agcgaacaag
5101 tactgcgaag gaaagatgaa aagaactttg aaaagagggc taaaagactt gaaaccgttg
5161 agaaggaagc tgtagaagag caataaactg gacggcgcat aagggggaag tactaatcac
5221 tgcagagtcg atacgtaaaa ggtcgatgag taaggaaatg gtacagaact tgctacaccg
5281 gtcagaagac aaaatgggtt cagattgaag gagtcacctg agatcgggca gcaatgcaga
5341 tcaaaaggaa aacttcaaac tggactgagg ggcctaaggg cgattttgtc aaaatggctt
5401 ctactgaccc gtcttgaaac acggaccaag gagtctatca attaagcgag tgatagggtg
5461 gaaaaacccg tccgcgaaac gaaagtgagt acaaggtgcc aagccgcaag gtagcagcat
5521 cacccgcctt gagtctccgc gaagggttcg aggaagagct taattgttag gacccgaaag
5581 atggtgaact acgcttgaat agggtgaagc caggggaaac tctggtggaa gctcgtagcg
5641 atactgacgt gcaaatcgtt cgtcaaattt gagtgtaggg gcgaaagact aatcgaacca
5701 tctagtagct ggttccctcc gaagtttctc tcaggatagc aagagcaagt acgcagtttt
5761 attaggtaaa gcgaatgatt gaaggactcg ggagtcctaa gaacttcgac ctattctcaa
5821 actttaaatt ggtaagagcc gcggagttta cttaaatgaa ctctcgggaa gaacgcagtg
5881 ctcttgagtt gggccatttt tggtaagcag aactggcgat gagggatgaa cctaacgttg
5941 agataaggcg cccaaatgca cgctcatcag ataccacaaa aggtgttggt tcatacggac
6001 agcaggacgg tggctatgga agttagaatc cgctaaggag tgtgtaacaa ctcacctgcc
6061 gaatgaacta gccctgaaaa tgaatggcgc tgaagcgtgt tgccgatact caaccatcag
6121 agcaaatgcg aggctttgat gagtaggagg gcgtgatcgt tgcctagaag tattggcgtg
6181 agcctatatg gagcagcgat tagtgagatc ttggtggtag tagcaaatat tcaaatgaga
6241 actttgaaga ccgaagtgga gaagggttcc atgagaacag caattgttca tgggttactc
6301 gatcctaaga cataggttaa ctccttgcaa tacaagaaga cattcgtttt cgttgtcaaa
6361 agggaatgag gttaatattc ctcaagctgg acgtggtata ggcggtaacg caaagaaacc
6421 cggaaacgtc agcaggtgtc actggaagag ttatcttttc tttttaacat actatggcca
6481 tgaaattgga ttatccagag atatcggctg tatgtatggc agagcagctc accctaagag
6541 ctgtcagttg cgcgcctgat gacccttgaa aatctggggg agacataatt tcacgccagt
6601 tcgtacccat aaccgcatca ggtctccaag gttagcagcc tctggtccat agaacaatgt
6661 agataaggga agtcggcaaa ttggatccgt aacttcggga taaggattgg ctctgaggat
6721 cgggtataaa ggctttgtaa tgatatccaa gcttgtttgt tagtgtggca acatgctgat
6781 agacttgcga acgatgaatt tgcaaggtag gtttcggccg tctttataca attaacgatc
6841 aactcagaac tgaagcggac aaaggtaatc cgactgttta ataaaaacaa agcattgtga
6901 cggcctcaac aggtgatgac acaatgtgat ttctgcccag tgctctgaat gtcaaagtga
6961 cgcaattcaa ccaagcgcgg gtaaacggcg ggagtaacta tgactctcta aatagcaata
7021 tttacctttg gagggaaaag ttatcaggca tgcacctggt agctagtctt taaaccaata
7081 gattgcatcg gtttaaaagg caagaccgtc aaattgcggg aaaggggtca acagccgttc
7141 agtaccaagt ctcaggggaa actttgagat ggccttgcaa agggtatggt aataagctga
7201 cggacatggt cctaaccacg cagccaagtc ctaagtcaac agatcttctg ttgatatgga
7261 tgcagttcac agactaaatg tcggtcgggg aagatgtatt cttctcataa gatatagtcg
7321 gacctctcct taatgggagc tagcggatga agtgatgcaa cactggagcc gctgggaact
7381 aatttgtatg cgaaagtata ttgattagtt ttggagtact cgtaaggtag ccaaatgcct
7441 cgtcatctaa ttagtgacgc gcatgaatgg attaatgaga ttaccactgt ccctatctac
7501 tatctagcga acccacagct aagggaacgg gcttagaata atcagcgggg aaagaagacc
7561 ctgttgagct tgactctagt ctaactttgt gaaatggcac gtggggtata gcctaggtgg
7621 gagagcaatc gatcctgtaa aaccactacc cacgtagtca ttttgcttat ttcgtgaaga
7681 aaagactggt gcaaaccagt tctaagatta aggtcattta ttgactgatt ttgcgaagac
7741 atggttaggg ggggagtttg tctggggcgg aatgcctgtt aaaccataac gcaggcgtcc
7801 taagtgtagc tcagtgagaa cggaaatctc acgtagaaca aaagggtaaa agctacattg
7861 attttgattt tcagtaggaa tacaaaccgc gaaagcgtgg cctatcgatc ctttaacttt
7921 acaagtttta agctagaggt gtcagaaaag ttaccacagg gataactggc ttgtggcagc
7981 caagagttca tatcgacgtt gctttttgat ccttcgatgt cggctcttcc tatcattgtg
8041 aagcagaatt cacaacggtg tcggattgtt cacccgctaa tagggaacgt gagctgggct
8101 tagaccgtcg tgagacaggt tagttttacc ctactgatga aacgatgttg cgacagtaat
8161 ttaagttagt acgagaggaa cacttaaatc agataattgg taaatacggt tgtctgaaaa
8221 gacaatgccg tgaagctacc atctgttgga ttatgactga aggcctctaa gtcagaatcc
8281 atgctggaaa gcaatgtcta agtgtgatga taaacgaaaa aaaataaaaa ttaagttcga
8341 aaggtagagc ggggaagagc gaaaaagctt gaccttaact gctaatcgta ttccaaatta
8401 tcatctacgt aaatcttttg tagacgactt aacatggaac gggtattgta agcatgagag
8461 tagaatttct acgatctgct gagattcagc ccgtctcctt agatttatct catctccctt
8521 tattttttac ttctgctggg gttgttaacc tctttaagaa attttttatg ttttgatttg
8581 tttaatttaa ttttgtttaa ctttagtaaa tttttttcct tttttcactc actgggttat
8641 taaatactta gagattttac attttatcaa ataatttatg aactcattaa aacaaaacaa
8701 aacaaagtta aaaaaaactc aatagatttg ctaataagat gcaaagcagc tatgaggcaa
8761 tttttctcat ttggaaagct tcaatcaact gcttataaat aaattataaa tcaatattaa
8821 aaatgttaaa gttttatgtt atttgttagt aaaaaaattg aatagttgtg tttaagctga
8881 tataagtctt tatgcatgat atgttaaaag ttacgcttaa aattatgctt tttacgcaga
8941 atgagcttag ctaaattttt tctcaaagta aatttttttt aatgcaaaat gaatgaaaaa
9001 attttagtat tttataaaaa ttcttcattc aaattttacc cacttatcaa tttatttttt
9061 tttgtgacta aagcagtccc agagcctttc tctaaaagtt gaattttatt aacaatgcca
9121 cttttataga aaattttgca tggatttcct ggggctccaa tggaaaaatt gcgaaagtgg
9181 atttgaatga aaaagtgaat gtaaaaatta aagtaaaatt ttgctttata aaatgaatga
9241 aaatttaaaa caagcaaaat gaatgaaaaa atctttgcat tttaacaaaa tttttcattc
9301 aaaatttcac ccacttatca atactttttt ttctccagcc gtcaaagacc tatattgttt
9361 tcctaaaagt tgacttttat taagaaacaa aatgaatgaa aaaatctttg tattttaaca
9421 aaatttttca ttcaaaattt cacccactta tcaatatatt ttttttaagt cctgcctgca
9481 ggctaatatt ctttcctaaa agttgacttt tattaagaag caaaatgaat gaaaaaatct
9541 ttgtatttta accaaatttt tcattcaaaa tttcacccac ttatcaatat tttttttggg
9601 accaaaccaa aagacctaaa gatttgattt aaaaagttga cttttttcaa gaaaaccact
9661 ttattagata aatctctttt ttaccacggc ttgtccaatg aataatttgc taaagtggat
9721 ttgaataaaa atttttttgc gtgtaaaaat gcgctaaact acgcttagat tttaacttta
9781 tcccacttta atttcaagcg taaaaataaa aatcccacac aaaaattaag tggaaattga
9841 tgcaaaaatt tcactaaaat ttaattcaat aaatatgtaa aaatggttga tctctataat
9901 ttatgagatt tgcattattt aaggcttata agaaatttta aatttaacgc ggaagcttca
9961 tttttagata aaatttatta atcatcatta atttcttgaa aaacatttta tttattgatc
10021 ttttataaca aaaaaccctt ctaaaagttt atttttgaat gaaaaactta taaaaattta
10081 tgaaaactac aaaaaataaa atttttaatt aaaataattt tgataagaac ttcaatcttt
10141 gactagctta gtcatttttg agatttaatt aatattttat gtttattcat atataaacta
10201 ttcaaaatat tatagaattt aaacatttta acatcttaat cattgataaa taaccaaaaa
10261 tcaaagtatt acatcaataa ataactttta ctcaatgtca aagaaattat tgggg
//