GenBank-Updates@genbank.bio.net (05/18/91)
LOCUS TETRNNTS5 2343 bp ds-DNA INV 18-MAY-1991 DEFINITION Tetrahymena thermophila rDNA 5' NTS/ETS sequence ACCESSION X02364 KEYWORDS external transcribed spacer; nontranscribed spacer; ribosomal DNA. SOURCE Tetrahymena thermophila DNA. ORGANISM Tetrahymena thermophila Eukaryota; Animalia; Protozoa; Ciliophora; Oligohymenophora; Hymenostomata; Hymenostomatida; Tetrahymenina; Tetrahymenidae. REFERENCE 1 (bases 1 to 2343) AUTHORS Challoner,P.B., Amin,A.A., Pearlman,R.E. and Blackburn,E.H. TITLE Conserved arrangements of repeated DNA sequences in nontranscribed spacers of ciliate ribosomal RNA genes: evidence for molecular coevolution JOURNAL Nucleic Acids Res. 13, 2661-2680 (1985) STANDARD full automatic COMMENT Data kindly reviewed (16-DEC-1986) by P. Challoner From EMBL 26 entry TTRNNTS5; dated 06-JUL-1989. FEATURES Location/Qualifiers misc_feature <1..1858 /note="5' NTS" misc_feature <1..29 /note="non-palindromic region" repeat_region 762..794 /note="repeated sequence Ia" repeat_region 818..837 /note="repeated sequence IIIa" repeat_region 850..869 /note="repeated sequence IIIb" repeat_region 882..901 /note="repeated sequence IIIc" repeat_region 1189..1221 /note="repeated sequence Ib" repeat_region 1214..1233 /note="repeated sequence IIId" repeat_region 1248..1267 /note="repeated sequence IIIe" repeat_region 1280..1299 /note="repeated sequence IIIf" repeat_region 1364..1384 /note="repeated sequence IIa" repeat_region 1385..1405 /note="repeated sequence IIb" repeat_region 1406..1425 /note="repeated sequence IIc" repeat_region 1426..1446 /note="repeated sequence IId" repeat_region 1447..1467 /note="repeated sequence IIe" repeat_region 1468..1487 /note="repeated sequence IIf" repeat_region 1488..1508 /note="repeated sequence IIg" repeat_region 1509..1527 /note="repeated sequence IIh" repeat_region 1528..1548 /note="repeated sequence IIi" repeat_region 1549..1568 /note="repeated sequence IIj" repeat_region 1569..1589 /note="repeated sequence IIk" repeat_region 1590..1610 /note="repeated sequence IIl" repeat_region 1611..1630 /note="repeated sequence IIm" repeat_region 1646..1665 /note="repeated sequence IIIg" repeat_region 1743..1775 /note="repeated sequence Ic" repeat_region 1806..1838 /note="repeated sequence Id" misc_feature 1859..>2343 /note="5' ETS" BASE COUNT 989 a 243 c 344 g 767 t ORIGIN 1 gttttttttg ctttttgttg ttagttttat agccttcagc actatgttgt tgaattttac 61 cttcgaaaat cacttaaaat tgagtaataa ttgggtttaa aatttaaatt tgagtagata 121 agaattagat gtttatattc tgctaatttc actggtgaaa atgtagcaaa tagaaattat 181 tttaatctaa taaactagca aatagtattt aaaacaaaaa tatttgtttt ttatgttgta 241 aaatgtttta aattagataa aatttacaaa tttacaaatt ttcaagcaaa ataggttcta 301 aaaaatgaga aaatattaca tattttagct atttgactac tttaatgcta gtaaattaaa 361 atgaatttaa ttcattttca ctttaaaaca cttattttaa taaaatatat gattttaaaa 421 tgataaaata ttttttaaga ggtaaattta agaaattagt taaattttaa agaaaaagca 481 tctaaaaatg gacaaaaatg aagtatttcc tttttttata catttaaatg ctagaaaatt 541 taagtaaaac atttataaat aaaagtaaaa tagttttagg aatatgagta aatagttttt 601 tttatgtaaa aaacatttta tcaatttcat ttattcattt tagttaaatt tttcattcac 661 aaaaaacttt tttttggtaa aataaagact ttataaagat aacttaaaga aaaagtttat 721 ctagattaaa aatattgatt ttgaaaattg ctcattagat atttttttgg caaaaaaaaa 781 aacaaaaata gtaaaaaatc actttttttg agagttgaaa aaaagactta gaaaaaattt 841 taaaagtgta aaaaaagact tagagaaaaa atcaaaaaga gataaaaaga cttagagaaa 901 atttataaat taaaatgtag aaagtaaatt tattttatat tttttaatca tttaaatgct 961 agtaaattta aataaaacat atataaaaaa acataaaaca attttaacag catgcgtata 1021 tcatttttta tatgtaaaaa acattttatc aatttcattt attcatttta gttaaatttt 1081 acattcaaaa taaatttttt ttgattaaat aaagagttca taaagagaac ttaaagaaaa 1141 agtttatcta gattaaaaat attgattttg aaaattgctc attagaaatt tttttggcaa 1201 aaaaaaaaac aaaaatagta aacttagaaa aatttttgaa aaatgaaaaa aaaagactta 1261 gagaaaaaaa tcaaaaagtg aaaaaagact tagaaaaatt tttaaaaatg aaaaaatgat 1321 ttaaggagaa aattttgagt tgcgcttaga ttttgtgtga agccacttac aaaaaatgac 1381 gggactcgct caaatattta agtggactcg cataaaatga gtgagtcact aaaaaaatta 1441 agtgaactca cttaaaaatg agtggagcca ctcaaaaaat taagtgactc acttaatatt 1501 cggcggagtt aaacaaaaat aagtggactc acagaaaatt aagcggattg cgctaaaaaa 1561 tgagtggact cgcttaaaaa tgagtggagc cactcaaaag ttcagcagag ccacttaaaa 1621 atttagctta aaatcagctc taaattaaat tagacttagt gaaaaatagc gaaaatgaaa 1681 aaaatgaaaa aatgaatgaa aactgaaaaa tttacaaggg attgaaaatt ttggcagagt 1741 cttttttttg gcaaaaaaaa aaacaaaaat agtaaacctt ccgaactttt ttgactttga 1801 gaaaaattct ttggcaaaaa aaataaaaat aatatcaggg gggtaaaaat gcatatttaa 1861 gaaggggaaa catctccgga tcaaaaataa aatatcagct cgatttgagc ttcagtaaga 1921 tttccttttg ggcaaccaag gataacgata atgaagcgct aactgagcag acgtttttct 1981 ctatggcttc ggcttttagt cgatggccgc tgagggtctg ttgaaggttt ttctggatta 2041 aggctcgtat tagagcaaat ggcctgactg aaattttcat gaaggctgta aattcactgc 2101 aaagcttcgc agaaactttt cccagtgaca cttgttgtat cgatatctat gcagatattg 2161 ttacaaataa cgcaacacgc tagtactgtt ataaatcggt gaaatcgcag atgttattaa 2221 cagctagcaa caaagttgac tagagtcgaa gagatgcgat agagttttct cattgtgcct 2281 tcgaagattt tagcaactag aagaaactaa tagtaaacga aacgatgcgg gatctatgta 2341 taa //