GenBank-Updates@genbank.bio.net (05/18/91)
LOCUS TETRNNTS5 2343 bp ds-DNA INV 18-MAY-1991
DEFINITION Tetrahymena thermophila rDNA 5' NTS/ETS sequence
ACCESSION X02364
KEYWORDS external transcribed spacer; nontranscribed spacer; ribosomal DNA.
SOURCE Tetrahymena thermophila DNA.
ORGANISM Tetrahymena thermophila
Eukaryota; Animalia; Protozoa; Ciliophora; Oligohymenophora;
Hymenostomata; Hymenostomatida; Tetrahymenina; Tetrahymenidae.
REFERENCE 1 (bases 1 to 2343)
AUTHORS Challoner,P.B., Amin,A.A., Pearlman,R.E. and Blackburn,E.H.
TITLE Conserved arrangements of repeated DNA sequences in nontranscribed
spacers of ciliate ribosomal RNA genes: evidence for molecular
coevolution
JOURNAL Nucleic Acids Res. 13, 2661-2680 (1985)
STANDARD full automatic
COMMENT Data kindly reviewed (16-DEC-1986) by P. Challoner
From EMBL 26 entry TTRNNTS5; dated 06-JUL-1989.
FEATURES Location/Qualifiers
misc_feature <1..1858
/note="5' NTS"
misc_feature <1..29
/note="non-palindromic region"
repeat_region 762..794
/note="repeated sequence Ia"
repeat_region 818..837
/note="repeated sequence IIIa"
repeat_region 850..869
/note="repeated sequence IIIb"
repeat_region 882..901
/note="repeated sequence IIIc"
repeat_region 1189..1221
/note="repeated sequence Ib"
repeat_region 1214..1233
/note="repeated sequence IIId"
repeat_region 1248..1267
/note="repeated sequence IIIe"
repeat_region 1280..1299
/note="repeated sequence IIIf"
repeat_region 1364..1384
/note="repeated sequence IIa"
repeat_region 1385..1405
/note="repeated sequence IIb"
repeat_region 1406..1425
/note="repeated sequence IIc"
repeat_region 1426..1446
/note="repeated sequence IId"
repeat_region 1447..1467
/note="repeated sequence IIe"
repeat_region 1468..1487
/note="repeated sequence IIf"
repeat_region 1488..1508
/note="repeated sequence IIg"
repeat_region 1509..1527
/note="repeated sequence IIh"
repeat_region 1528..1548
/note="repeated sequence IIi"
repeat_region 1549..1568
/note="repeated sequence IIj"
repeat_region 1569..1589
/note="repeated sequence IIk"
repeat_region 1590..1610
/note="repeated sequence IIl"
repeat_region 1611..1630
/note="repeated sequence IIm"
repeat_region 1646..1665
/note="repeated sequence IIIg"
repeat_region 1743..1775
/note="repeated sequence Ic"
repeat_region 1806..1838
/note="repeated sequence Id"
misc_feature 1859..>2343
/note="5' ETS"
BASE COUNT 989 a 243 c 344 g 767 t
ORIGIN
1 gttttttttg ctttttgttg ttagttttat agccttcagc actatgttgt tgaattttac
61 cttcgaaaat cacttaaaat tgagtaataa ttgggtttaa aatttaaatt tgagtagata
121 agaattagat gtttatattc tgctaatttc actggtgaaa atgtagcaaa tagaaattat
181 tttaatctaa taaactagca aatagtattt aaaacaaaaa tatttgtttt ttatgttgta
241 aaatgtttta aattagataa aatttacaaa tttacaaatt ttcaagcaaa ataggttcta
301 aaaaatgaga aaatattaca tattttagct atttgactac tttaatgcta gtaaattaaa
361 atgaatttaa ttcattttca ctttaaaaca cttattttaa taaaatatat gattttaaaa
421 tgataaaata ttttttaaga ggtaaattta agaaattagt taaattttaa agaaaaagca
481 tctaaaaatg gacaaaaatg aagtatttcc tttttttata catttaaatg ctagaaaatt
541 taagtaaaac atttataaat aaaagtaaaa tagttttagg aatatgagta aatagttttt
601 tttatgtaaa aaacatttta tcaatttcat ttattcattt tagttaaatt tttcattcac
661 aaaaaacttt tttttggtaa aataaagact ttataaagat aacttaaaga aaaagtttat
721 ctagattaaa aatattgatt ttgaaaattg ctcattagat atttttttgg caaaaaaaaa
781 aacaaaaata gtaaaaaatc actttttttg agagttgaaa aaaagactta gaaaaaattt
841 taaaagtgta aaaaaagact tagagaaaaa atcaaaaaga gataaaaaga cttagagaaa
901 atttataaat taaaatgtag aaagtaaatt tattttatat tttttaatca tttaaatgct
961 agtaaattta aataaaacat atataaaaaa acataaaaca attttaacag catgcgtata
1021 tcatttttta tatgtaaaaa acattttatc aatttcattt attcatttta gttaaatttt
1081 acattcaaaa taaatttttt ttgattaaat aaagagttca taaagagaac ttaaagaaaa
1141 agtttatcta gattaaaaat attgattttg aaaattgctc attagaaatt tttttggcaa
1201 aaaaaaaaac aaaaatagta aacttagaaa aatttttgaa aaatgaaaaa aaaagactta
1261 gagaaaaaaa tcaaaaagtg aaaaaagact tagaaaaatt tttaaaaatg aaaaaatgat
1321 ttaaggagaa aattttgagt tgcgcttaga ttttgtgtga agccacttac aaaaaatgac
1381 gggactcgct caaatattta agtggactcg cataaaatga gtgagtcact aaaaaaatta
1441 agtgaactca cttaaaaatg agtggagcca ctcaaaaaat taagtgactc acttaatatt
1501 cggcggagtt aaacaaaaat aagtggactc acagaaaatt aagcggattg cgctaaaaaa
1561 tgagtggact cgcttaaaaa tgagtggagc cactcaaaag ttcagcagag ccacttaaaa
1621 atttagctta aaatcagctc taaattaaat tagacttagt gaaaaatagc gaaaatgaaa
1681 aaaatgaaaa aatgaatgaa aactgaaaaa tttacaaggg attgaaaatt ttggcagagt
1741 cttttttttg gcaaaaaaaa aaacaaaaat agtaaacctt ccgaactttt ttgactttga
1801 gaaaaattct ttggcaaaaa aaataaaaat aatatcaggg gggtaaaaat gcatatttaa
1861 gaaggggaaa catctccgga tcaaaaataa aatatcagct cgatttgagc ttcagtaaga
1921 tttccttttg ggcaaccaag gataacgata atgaagcgct aactgagcag acgtttttct
1981 ctatggcttc ggcttttagt cgatggccgc tgagggtctg ttgaaggttt ttctggatta
2041 aggctcgtat tagagcaaat ggcctgactg aaattttcat gaaggctgta aattcactgc
2101 aaagcttcgc agaaactttt cccagtgaca cttgttgtat cgatatctat gcagatattg
2161 ttacaaataa cgcaacacgc tagtactgtt ataaatcggt gaaatcgcag atgttattaa
2221 cagctagcaa caaagttgac tagagtcgaa gagatgcgat agagttttct cattgtgcct
2281 tcgaagattt tagcaactag aagaaactaa tagtaaacga aacgatgcgg gatctatgta
2341 taa
//