GenBank-Updates@genbank.bio.net (05/18/91)
LOCUS FPVFPHIND 10465 bp ds-DNA VRL 18-MAY-1991
DEFINITION Fowlpox virus DNA sequence (Hind III fragment)
ACCESSION X17202
KEYWORDS unidentified reading frame; viral replication.
SOURCE Fowlpox virus DNA.
ORGANISM Fowlpox virus
Viridae; ds-DNA enveloped viruses; Poxviridae; Avipoxvirus.
REFERENCE 1 (bases 1 to 10465)
AUTHORS Paoletti,E.
JOURNAL Unpublished (1989)
STANDARD full automatic
REFERENCE 2 (sites)
AUTHORS Tartaglia,J., Winslow,J.P., Goebel,S., Johnson,G.P., Taylor,J. and
Paoletti,E.
TITLE Nucleotide sequence analysis of a 10.5 kbp HindIII fragment fowlpox
virus: relatedness to the central region of the vaccinia virus Hind
III D region.
JOURNAL J. Gen. Virol. 71, 1517-1574 (1990)
STANDARD full staff_review
COMMENT *source: strain=FP-1;
From EMBL 26 entry POFPHIND; dated 25-FEB-1991.
FEATURES Location/Qualifiers
CDS <1..479
/codon_start=3
/gene="ORF FPLEFT"
/codon_start=1
CDS 530..1183
/function="vaccinia D4 homolog"
/gene="ORF FPD4"
/codon_start=530
CDS 1282..1668
/gene="ORF FP14"
/codon_start=1282
CDS 2119..2610
/gene="ORF FP18"
/codon_start=2119
CDS complement(2661..3317)
/gene="ORF FP25.9"
/codon_start=3317
CDS 4258..6630
/function="Vaccinia D5 homolog"
/gene="ORF FPD5"
/codon_start=4258
CDS 6614..8428
/function="Vaccinia D6 homolog"
/gene="ORF FPD6"
/codon_start=6614
CDS 8504..8986
/function="Vaccinia D7 homolog"
/gene="ORF FPD7"
/codon_start=8504
CDS 9153..9977
/gene="ORF FP30"
/codon_start=9153
CDS 10230..>10463
/function="Vaccinia D9 homolog"
/gene="ORF FPD9"
/codon_start=10230
BASE COUNT 3893 a 1503 c 1690 g 3379 t
ORIGIN
1 aagctttaag atggcccctc ggaaagccca gtataacgtt ttttagacta tggattatag
61 gagaatacgg tacacataac attaatttgg acaccatcgt acgtattcta aaacgaatga
121 cgggtagaaa aataactaat aattgcggtt taggagatat actaatatac gcttttggta
181 tagtaagaaa acaagctaat aaactaggat tagattgtaa acgtattaca tttagaaatt
241 tttggaaaga agtagcatcg atacaactta ttaggtataa taagtataaa tcttctatgg
301 ataataaaaa taaacaaaat aataaagtaa tatcacctga taataatcaa tataaatatc
361 ttccatttaa tccttggatg ttagatatca gtaaagaagt cgaactgtgg gatgatttaa
421 aattgaattt actagataaa aataagtggt ataatgactg gcctgttcta tcacgtgcat
481 gatacagcga aattgaaaac aaaataaata tgaataattg taatctataa tgaagacgtt
541 aaagttaaat aattggccgt atcctataga ataccacgag gattgggaaa atattattaa
601 ccatatatct gatgttatag aagagacagg accttggctg ctagaagaaa atacatcacc
661 gtctcatgaa aatattttta aacaacttaa acaatcacta aaagataaaa gagtatgtat
721 agtcggtata gatccttacc ccacggatgc taccggcgtg cctttcgaat ctccggattt
781 ttcaaaaaaa actattaagg ctatagcaga aaatatttct agaagatata acgtcagact
841 cttcaagaac tacaattttt tgtttgtaga aggtgtatta gcgtggaact attacttaag
901 ttgcagagaa ggcgaagcaa aaagtcacaa gattttctgg gaaaggttag cggatgtttt
961 catcaaccat atagcggcct acgtatccgt gttttacttt ttaggtaaaa gcgatttctc
1021 gaattttaga tctatattaa actctccaac tactgtagta gtaggctatc atccagcggc
1081 taggaatcgt caattcgata cagacgaaac tttcgaaatt gttaacacgt tattagaact
1141 caagaacgaa cccagaataa attgggtaca aggatttgaa atataatgtt tttataaaag
1201 gttaaaaaaa tttaaaaata atatagccat taacagatga attactatta agtgtttaca
1261 agtatcttaa ttaacgcaga tatgcagagt aatatttcta tatacgtgtt aactgtaata
1321 ggatcctgtt tttacaatcc ttttatacta acgtacgagt gtagagatga ttgctgtaat
1381 ggcagatacg gaccagttcc cgctccttgg aaagttttaa attgtaccaa aactgggccc
1441 ggatgcccgg acagtggcta cctattaaca actagtgaaa ataaaactta ttgcataaca
1501 gggaatgaga cggataaagg taattatcca caaacaattg gtgccatatt tccaaattgt
1561 agcggtatga acgttggtgc cggcagactt ataactagga tgttggaaga atatccgcgt
1621 ggtaaatcac ctagtaataa cagtattaat aacataaaaa taagttgcta aaataacata
1681 taataacgac attatatgct atagtatggt aagttttgct atacgagtat cgtatactac
1741 gtacgataca tttaaaaata ggtaaaatgg ataatacttg tacgtcggta gtactaataa
1801 tttaataata cgatagatgg ttaaaaacat ctctcgtact aatgagttag tatatgaaat
1861 attatactgt tctgttatct ctattataaa tagtaatgga taatataatc ttttatactc
1921 tgcgcggtat aatttattaa gtggggtata gctgcgcaga gctatcctct atctcttaag
1981 tatataccaa tttcaagatt attctaatat aatttttttt aaatataaat aaaaggatta
2041 caaaatgtat acgcgttaca aattaagtat attatttttt gtaataaatt tctataatat
2101 actctgtatg ccgttatcat gcgaaacaca gagtgctgta tggcgggtaa aaaatacgat
2161 gatgctgcta ttgatagaga cctatgcgtg ttactatgta atcttcaata tctggcaagc
2221 agcaatgaag gtataggtga aattttacag tgttgcctat ccagtaacta tacttcaaaa
2281 acaagagaag acctccgtaa ttgcatcgct aaatgcccgc ctctgccgga tcgaggatgt
2341 accggagagt gctgtgattt aagagaaaat gtagatagtc ttagagccaa caatccgcta
2401 ggatgctgca atgactatac aaaagtttca tctagttcac tcaacgaaga tgatgttata
2461 gactgcagga aatcagatgc ttcctgtgaa gatagaggat acttactggt gagaaataac
2521 ggttcggcgg tttgcatacc agaaaacagt aaaaacgata atataggatt ctattttggt
2581 agtgaatgtt cagatttatc cagaaaaggt taacggtatt tgtaccgtta actgacaatt
2641 ttatttaata taatagttta tatagaattt atgaattccg taacctcgtt tattaatttt
2701 ttttttgcac atggatcgaa tataaaatct tcttctccat cgattattaa taccggaact
2761 tttttacatt gcgtcagcca taattcgtgt ttttcatgaa gtgtctttaa atagtctata
2821 cttatatttg gatagttttt ctccgttata gatttttcat taatacgttc tttacacgac
2881 tccggtatag ttcttaaata aataatacca tcaaactgga tctctaattt atccgtatac
2941 caatcgtgct gtttacagta gagtgcccat tctgggtcat ccatatatcc tagggctgtg
3001 gctgcttcgg caaaaacata cctatcgcta aatatagatc tttctaatat atttacgcgg
3061 ctaggtacaa aacattctaa gtgcattctg actctcttca tacagtaatg cgtttgtaac
3121 gcgtaactcc atcttgaagg attttcatgg aattttctta ttaattcttt ttctatagga
3181 gtatatctat cttctacgtc gtggaaagaa acaacgttat taatatttct tagtatattt
3241 aggacgtctg tctttccaga agatatattt ccttctatgg atagtttttt agatgtgaat
3301 tcatttatgc tatccattgc ctatatttac ttatcacgaa tcgtacgctg ttaaatcaaa
3361 gatattcccg catacttata atatactcac tataatatag acatcatata aacttatagc
3421 cgtttgtttc tgtttttaaa atatgataga acatacatta agattataat agctgtggta
3481 aagtatccta tcggagtgag attcatatat gatattgcat tagatgattg tcctaacact
3541 atgctgctgt tctggagaga tggggatatc tagtaaccgc actatctttc cgtttaagtt
3601 atgtaattcg tgcgtctgta gatagacgta gctataattt cattgaagga gatgagtatt
3661 ggggttaaga gatatctaat catagtctta tatatctcta ctgtgtattc ctaaaaataa
3721 taatactttt tataaataat atctttatca aagaaatata attcaacgta gatacagaca
3781 ataaatcttg tcataatcat agagatctta atataaatag tatatcagct tatgctgtta
3841 taaactatag aacattctac attcgtgtaa aaaccaaagt attcccgcta ttgcttccaa
3901 taatacattt tgtgatattt caaatagtag aagtgtacta ggattgcctt acttcggcga
3961 cgagtattga agtttatatt gtttaaaaga tacgaaagaa attctgtatg tactagatta
4021 atagtgtcga ataaatacag agttacataa tatttaaatc gtataacgat aacgagattt
4081 aaaatagaaa atcaatttat attaatacaa agagtcatat ttgtttatac tgtatgtttg
4141 tgtttgtaac cacgttatca ttatcaaaca atatttacat tatatctaac tttaaaaata
4201 gtaaatactt atagaagaaa ctatatcctt ttagtgaaat tttaattaat gatttaaatg
4261 gccctttctg tgataagaaa caatcacatt atttttgtac ttaagcagat aggtgtacgt
4321 acaaaacata gagaaaataa taacagcaaa tatgtagaat catttacatg cgatgaactg
4381 gaaagatata tctatagcaa tccagattgt acgttattcg aaacgctaaa agatgaagag
4441 tattattcaa atgtcagggt gttttttgat gtggatatgg atgggaggtt agatgataaa
4501 tatcaggcta ctcataattt tgtaaacatc attacaaagt ttgtagcaga ttacgcctat
4561 aacgattgta agatgataag taatcataga gataaagata aaatgataac tgatatgaaa
4621 tcgaattttt caataaccga gtctaccgat aaagaaaaaa caagttttca tcttatattt
4681 ttcaattgct atactaccct ggatactctc ataaatatgc gtaaaaaatt aattgtattg
4741 acaaaagaat caaataaccg tttagtaaaa gctatagata catcagttta cagacataag
4801 ccatctctta ggatagtggg aactaagaaa gattcgatta acattcacgt tcataaaaag
4861 actaaacaaa atattcattt taaaaattat ctattcacct atgtagatta taatgaagaa
4921 gactgttatt atttcgtcag cgagcaacaa catcaatctc cagatctctt aaactggaaa
4981 gaggaatata taccttttca cgacgctatc aaaaaaatat ctaaagctat aggtaatagc
5041 ataattaatc taaaggatat tacagctgaa aactttacag taactccttt agatatttac
5101 tatgccacgc cttgtaatct atgtaaaaaa gtatctcata aacatcctca tcacttactg
5161 attagtaacg attgtataag aatatataaa tccggaaatc ccaatagctg taagattaaa
5221 actatttcct tagaaggtaa taaattattc agtatttcac agcaaataat agatcttaat
5281 gtaattaatg tttcagatag aggagaatat ctagtttggt tgaaaaacgt gtggagaatg
5341 tgtgaagatg ataataatat aaccaaatta atactatata tgagagatca cttatcatcc
5401 gactgtaccg atttgttact atgtcctaga aatcggaaag tcatagaaca taaccttaaa
5461 gatatgttga tagatacgat agaaaccgac acttatccag aaaaattaca atttcttaac
5521 ggtgtgtatg atataaaaga ttctatattc tatcaaggta atgacgcaaa gaaatttgtt
5581 tgtactgtat caactgggta taaatacgaa gaaggtataa atgttgatga tataactaca
5641 gaactaatgt ctatactaga cgatatccaa ccaaagacaa aggaaaattt tgaaaataga
5701 gaactctacg aacagatact ttcgagttgt ctcatgggta ctacaaaaca atgcatattc
5761 ttcttttatg gagaaacagc tactggaaaa tcgacgacta aaaaattact aaaatctgtc
5821 atgcataata tgtttctaga aaccggtcag gttattctaa cagaacaaat ggataaaggt
5881 cctaatccct ttatcgctaa catgcacttg aagagagtag tattttgtag cgaacttcct
5941 gattttagtt ataatacgtc caaaaaaata agatccgaca atatcaagaa gttaacagaa
6001 ccctgtgtag taggaagatc ttgttattct aataaaatca ataacaggaa tcatgctact
6061 atcataatag ataccaacta taaacccgta ttcgataaag tagataacgc tataatgaga
6121 aggatagctc tagttaattt taaaactcac tttactaata caaaaaagaa ggtgcataac
6181 tcaaagtatg attttattaa accgttaaac gaaagtcttg attcaaaaat tcaatctaat
6241 tattttagat acgcgtttct gaaaatactt ttaggatggt ttagtaaata tcatgttcct
6301 aacttaagaa tattaccaac accagataaa ataccagact ttaagttcag attaaaagta
6361 gaatctctca ttattcctag taattctacg catgtgaaat atgtagataa attaatgaaa
6421 ttaggatata taacagacga tgatggaata cctgtactac aattaaacat atttcaacag
6481 aaattaagtc tccattttaa tgtaaaacta tacgggcaag acattgacag ttttatcatg
6541 aagaataaaa aatatatgaa cttggccgat gaatacatgt cttttatatt catagaagat
6601 ttgaatacta taaatgaacc tagaaatact tgaactcttt aatgggcaca tagataacat
6661 tcctaatatc ttacctcatc aattagctac cttggattat cttttaagga ctatactaga
6721 tcataatgaa agtgttttgt tgtttcatat tatggggtca gggaaaacta ttatagcact
6781 gctatttgca cttatcgtgt caaagtttaa aaaggtttac atattggtac ctaatattaa
6841 tatacttaat atatttacgt ataatttaga tttggcaact aatctcatca atacagaata
6901 tgttattgaa aatattcata tttattcgac gattaatttc tatagtctta actacaacga
6961 taatgtagtg aactacaatg ctttatctaa gtacaacgac tctattttca tcatagacga
7021 ggctcataac atattcggaa acaatacagg tgaattaatg actattatta aaaataagaa
7081 taaggtacct tttcttttac tatcagggtc tcctatcact aatacaccta ttacactatc
7141 taatattatt agtattatgt cggatgaagg tataaacttt aacgatatta taatccaggg
7201 aaagaaagta tttcagataa tattaaacga aaaaggtgta agcgtattaa aaaatattct
7261 gaagaataag atatcctact atgaattatg tgatacggaa ctaccgagta tcatctttca
7321 cggtaaagag tttttagata cgaaagtagt ttattgtaaa atgtctaaac tacaggaaac
7381 tgactacata aacgtacgga aattgtgcaa taatgaaatg tttgaaaaaa acatgacaaa
7441 tgtttcttta gctgtattag gacctttgaa tttggctaat agtttagaac tgttattcgt
7501 agaacaggat aaagaacttt atcctaattt gaaaataaac gacggtgtct tatacggaga
7561 cgaattaact aaacttaata taagctcaaa atttaaatat tttatagata ctatcgggaa
7621 tcttacgggt aaaaatttta tctatttttc taattctaca tacggtggat tagtcatcaa
7681 gtatatcatg cttaacaacg gatattctga atacgccggt tcgcaaggta ccaatccaaa
7741 aatgataaac ggacatctta aaacatttgc tatagtcacg agtaaaatga agtcatcctt
7801 agaagattta ttggaagtgt ataattcccc agggaatgat aacggagaaa agattatgtt
7861 tttattttcc tccaatatta tgtcagaatc atatactttg aaggaagtaa gaaacatctg
7921 gtttatgact atacctgata ctttttcaca atacaatcag attttgggta gatctattag
7981 aaagttctcg tataaagatg tttcgaaacc tgttaacgta tacctattag ctacggttta
8041 ttcagatttt aacgatacaa taacttctct agatgattat agtatagatg atataaatac
8101 tttaccattc gatatcaaaa aactacttta tctaaagttt aaaacgaaag aaacaaaacg
8161 aatttattcc atactaaaag atctatctat aaactataga tcatcacccc atccttatat
8221 aacggatgtt gtattaggcg agctggttag acaatttttt taccacaatt ctagagtaag
8281 tataaacgat gctaaacttt ttaaaatggt aaatagtatt tttaaatcca aagaaaaaac
8341 acaaaaatat atagagaaga taacagacga ccatttcttc gttactaata aagtatttga
8401 aaaatcattg ttatataaac ataaaaaatg atattatagt agtacctttc aatctattgt
8461 ttacagaata ttcttggatg attaatttta gaaagggaac taaatgtcgt tgtttaatac
8521 aaacgcgtat ttacccgtag ttatacaacc ccatgaatta aatttagatc taatggataa
8581 tataaaaaag gcagttataa ataagtattt acacaaggaa acatctgggt ttatggccaa
8641 aaagatacag atagtagaag atacccccat gccattagcg gagttagtta ataatgaaat
8701 agttgttcat gtgacatgta acatagatta taaatactat aaggtaggtg atatagtttc
8761 tggtatacta actattacag acgaatctga tatttcggta gtttgtagtg atctaatttg
8821 taaaatcaga agcgactccg gtactgtttc atatgataat tcaaaatact gtttcataaa
8881 gaacggtaaa gtctacgcta atgaaagtac agttactgtt atgttaaaag aagcccaatc
8941 tggaatggaa tcatcttttg ttttcttagg taacataatt gaaaaataat actttaataa
9001 agattaattt acataatacc tacatcatgt aacgtatagc ttattaaaca tggatagcat
9061 ttagtaatat ttgtaaaatc aaaaataact ataaatattt taatagtata ttgaattctt
9121 tatcatgtag aaagatatta gttatacaca caatgatatg taaaaatagt attcgacata
9181 aagaattgac gttgataata tttctctgct ttatatatct atcaaaaact tttgtagaag
9241 taaaagcacc tccctatgta ctcgtaccgg aaggtagtga tataaatctt acttgtttta
9301 ttaaagatga tcagggtgct ggagaagata aagtaattgt agcgtggcaa cagggtgacg
9361 gagaagttac tcaaggaata aaaacaactt gggatacgac acgacaagtg ggccaaacca
9421 tgctacatat atccaaggta tctaaagaag cagaaggttc atatatgtgt gttgtatgga
9481 taaacggcga cgctgattat aaaaaaatga atctaggagt gtttactgtt tcaaaaaaaa
9541 cctacatgca taacgaagta agtataaccc ctcgaagatc gagagtagat atgtcggatg
9601 gtcggccgct aaaaattgaa tgtgctttta gtacccgacg aatatatggt agaagccaag
9661 tcaacataaa atggtggaag attgacggta ttacacgaaa atgggaacaa cagacttcgg
9721 gagttaactt actgttacat acttatggag ggataggatc gctaagtatc ccaaatccta
9781 caacaggaga atcaacaggt aagtatatgt gcgtagttac ctgtggagat attggaaatg
9841 ttggatttag actggtaaaa tcattatctc ctttatcaga tacagaatct gatcatagtt
9901 atacttcaga ggaaggatca cattttatgg aaagatgcaa agtcaaaaaa agtccgtacg
9961 gtggatggat agtagaatag atcatctcag ggacgcggta tatattgcta taaagtaaaa
10021 taatttctca atacattttt ctactttaac gatataatcg ttaacttatt agtttaatta
10081 tatcatatat tcctttatat cttaattaaa aaaatatatt cataaatggg atacactagt
10141 atttttttat atagtttacg atatgctatt tcactatata tagtttatca aacataagtg
10201 aaaaataaac aactataaaa actaagatca tgttcgatat atccagagaa caacaaaata
10261 tgttagaaaa aaataaagat tgtgttatta ctttcgaaac aaatagagaa agaataacta
10321 tagaaaacac taacataaaa gatatactta gcgatagacg aattcacata ttcgcgttat
10381 gtattacatc agataatata cctataatcg gtataagaag aacgtctttt atgtatcaat
10441 cggttatatc aaaaagaaga agctt
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