GenBank-Updates@genbank.bio.net (05/18/91)
LOCUS FPVFPHIND 10465 bp ds-DNA VRL 18-MAY-1991 DEFINITION Fowlpox virus DNA sequence (Hind III fragment) ACCESSION X17202 KEYWORDS unidentified reading frame; viral replication. SOURCE Fowlpox virus DNA. ORGANISM Fowlpox virus Viridae; ds-DNA enveloped viruses; Poxviridae; Avipoxvirus. REFERENCE 1 (bases 1 to 10465) AUTHORS Paoletti,E. JOURNAL Unpublished (1989) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Tartaglia,J., Winslow,J.P., Goebel,S., Johnson,G.P., Taylor,J. and Paoletti,E. TITLE Nucleotide sequence analysis of a 10.5 kbp HindIII fragment fowlpox virus: relatedness to the central region of the vaccinia virus Hind III D region. JOURNAL J. Gen. Virol. 71, 1517-1574 (1990) STANDARD full staff_review COMMENT *source: strain=FP-1; From EMBL 26 entry POFPHIND; dated 25-FEB-1991. FEATURES Location/Qualifiers CDS <1..479 /codon_start=3 /gene="ORF FPLEFT" /codon_start=1 CDS 530..1183 /function="vaccinia D4 homolog" /gene="ORF FPD4" /codon_start=530 CDS 1282..1668 /gene="ORF FP14" /codon_start=1282 CDS 2119..2610 /gene="ORF FP18" /codon_start=2119 CDS complement(2661..3317) /gene="ORF FP25.9" /codon_start=3317 CDS 4258..6630 /function="Vaccinia D5 homolog" /gene="ORF FPD5" /codon_start=4258 CDS 6614..8428 /function="Vaccinia D6 homolog" /gene="ORF FPD6" /codon_start=6614 CDS 8504..8986 /function="Vaccinia D7 homolog" /gene="ORF FPD7" /codon_start=8504 CDS 9153..9977 /gene="ORF FP30" /codon_start=9153 CDS 10230..>10463 /function="Vaccinia D9 homolog" /gene="ORF FPD9" /codon_start=10230 BASE COUNT 3893 a 1503 c 1690 g 3379 t ORIGIN 1 aagctttaag atggcccctc ggaaagccca gtataacgtt ttttagacta tggattatag 61 gagaatacgg tacacataac attaatttgg acaccatcgt acgtattcta aaacgaatga 121 cgggtagaaa aataactaat aattgcggtt taggagatat actaatatac gcttttggta 181 tagtaagaaa acaagctaat aaactaggat tagattgtaa acgtattaca tttagaaatt 241 tttggaaaga agtagcatcg atacaactta ttaggtataa taagtataaa tcttctatgg 301 ataataaaaa taaacaaaat aataaagtaa tatcacctga taataatcaa tataaatatc 361 ttccatttaa tccttggatg ttagatatca gtaaagaagt cgaactgtgg gatgatttaa 421 aattgaattt actagataaa aataagtggt ataatgactg gcctgttcta tcacgtgcat 481 gatacagcga aattgaaaac aaaataaata tgaataattg taatctataa tgaagacgtt 541 aaagttaaat aattggccgt atcctataga ataccacgag gattgggaaa atattattaa 601 ccatatatct gatgttatag aagagacagg accttggctg ctagaagaaa atacatcacc 661 gtctcatgaa aatattttta aacaacttaa acaatcacta aaagataaaa gagtatgtat 721 agtcggtata gatccttacc ccacggatgc taccggcgtg cctttcgaat ctccggattt 781 ttcaaaaaaa actattaagg ctatagcaga aaatatttct agaagatata acgtcagact 841 cttcaagaac tacaattttt tgtttgtaga aggtgtatta gcgtggaact attacttaag 901 ttgcagagaa ggcgaagcaa aaagtcacaa gattttctgg gaaaggttag cggatgtttt 961 catcaaccat atagcggcct acgtatccgt gttttacttt ttaggtaaaa gcgatttctc 1021 gaattttaga tctatattaa actctccaac tactgtagta gtaggctatc atccagcggc 1081 taggaatcgt caattcgata cagacgaaac tttcgaaatt gttaacacgt tattagaact 1141 caagaacgaa cccagaataa attgggtaca aggatttgaa atataatgtt tttataaaag 1201 gttaaaaaaa tttaaaaata atatagccat taacagatga attactatta agtgtttaca 1261 agtatcttaa ttaacgcaga tatgcagagt aatatttcta tatacgtgtt aactgtaata 1321 ggatcctgtt tttacaatcc ttttatacta acgtacgagt gtagagatga ttgctgtaat 1381 ggcagatacg gaccagttcc cgctccttgg aaagttttaa attgtaccaa aactgggccc 1441 ggatgcccgg acagtggcta cctattaaca actagtgaaa ataaaactta ttgcataaca 1501 gggaatgaga cggataaagg taattatcca caaacaattg gtgccatatt tccaaattgt 1561 agcggtatga acgttggtgc cggcagactt ataactagga tgttggaaga atatccgcgt 1621 ggtaaatcac ctagtaataa cagtattaat aacataaaaa taagttgcta aaataacata 1681 taataacgac attatatgct atagtatggt aagttttgct atacgagtat cgtatactac 1741 gtacgataca tttaaaaata ggtaaaatgg ataatacttg tacgtcggta gtactaataa 1801 tttaataata cgatagatgg ttaaaaacat ctctcgtact aatgagttag tatatgaaat 1861 attatactgt tctgttatct ctattataaa tagtaatgga taatataatc ttttatactc 1921 tgcgcggtat aatttattaa gtggggtata gctgcgcaga gctatcctct atctcttaag 1981 tatataccaa tttcaagatt attctaatat aatttttttt aaatataaat aaaaggatta 2041 caaaatgtat acgcgttaca aattaagtat attatttttt gtaataaatt tctataatat 2101 actctgtatg ccgttatcat gcgaaacaca gagtgctgta tggcgggtaa aaaatacgat 2161 gatgctgcta ttgatagaga cctatgcgtg ttactatgta atcttcaata tctggcaagc 2221 agcaatgaag gtataggtga aattttacag tgttgcctat ccagtaacta tacttcaaaa 2281 acaagagaag acctccgtaa ttgcatcgct aaatgcccgc ctctgccgga tcgaggatgt 2341 accggagagt gctgtgattt aagagaaaat gtagatagtc ttagagccaa caatccgcta 2401 ggatgctgca atgactatac aaaagtttca tctagttcac tcaacgaaga tgatgttata 2461 gactgcagga aatcagatgc ttcctgtgaa gatagaggat acttactggt gagaaataac 2521 ggttcggcgg tttgcatacc agaaaacagt aaaaacgata atataggatt ctattttggt 2581 agtgaatgtt cagatttatc cagaaaaggt taacggtatt tgtaccgtta actgacaatt 2641 ttatttaata taatagttta tatagaattt atgaattccg taacctcgtt tattaatttt 2701 ttttttgcac atggatcgaa tataaaatct tcttctccat cgattattaa taccggaact 2761 tttttacatt gcgtcagcca taattcgtgt ttttcatgaa gtgtctttaa atagtctata 2821 cttatatttg gatagttttt ctccgttata gatttttcat taatacgttc tttacacgac 2881 tccggtatag ttcttaaata aataatacca tcaaactgga tctctaattt atccgtatac 2941 caatcgtgct gtttacagta gagtgcccat tctgggtcat ccatatatcc tagggctgtg 3001 gctgcttcgg caaaaacata cctatcgcta aatatagatc tttctaatat atttacgcgg 3061 ctaggtacaa aacattctaa gtgcattctg actctcttca tacagtaatg cgtttgtaac 3121 gcgtaactcc atcttgaagg attttcatgg aattttctta ttaattcttt ttctatagga 3181 gtatatctat cttctacgtc gtggaaagaa acaacgttat taatatttct tagtatattt 3241 aggacgtctg tctttccaga agatatattt ccttctatgg atagtttttt agatgtgaat 3301 tcatttatgc tatccattgc ctatatttac ttatcacgaa tcgtacgctg ttaaatcaaa 3361 gatattcccg catacttata atatactcac tataatatag acatcatata aacttatagc 3421 cgtttgtttc tgtttttaaa atatgataga acatacatta agattataat agctgtggta 3481 aagtatccta tcggagtgag attcatatat gatattgcat tagatgattg tcctaacact 3541 atgctgctgt tctggagaga tggggatatc tagtaaccgc actatctttc cgtttaagtt 3601 atgtaattcg tgcgtctgta gatagacgta gctataattt cattgaagga gatgagtatt 3661 ggggttaaga gatatctaat catagtctta tatatctcta ctgtgtattc ctaaaaataa 3721 taatactttt tataaataat atctttatca aagaaatata attcaacgta gatacagaca 3781 ataaatcttg tcataatcat agagatctta atataaatag tatatcagct tatgctgtta 3841 taaactatag aacattctac attcgtgtaa aaaccaaagt attcccgcta ttgcttccaa 3901 taatacattt tgtgatattt caaatagtag aagtgtacta ggattgcctt acttcggcga 3961 cgagtattga agtttatatt gtttaaaaga tacgaaagaa attctgtatg tactagatta 4021 atagtgtcga ataaatacag agttacataa tatttaaatc gtataacgat aacgagattt 4081 aaaatagaaa atcaatttat attaatacaa agagtcatat ttgtttatac tgtatgtttg 4141 tgtttgtaac cacgttatca ttatcaaaca atatttacat tatatctaac tttaaaaata 4201 gtaaatactt atagaagaaa ctatatcctt ttagtgaaat tttaattaat gatttaaatg 4261 gccctttctg tgataagaaa caatcacatt atttttgtac ttaagcagat aggtgtacgt 4321 acaaaacata gagaaaataa taacagcaaa tatgtagaat catttacatg cgatgaactg 4381 gaaagatata tctatagcaa tccagattgt acgttattcg aaacgctaaa agatgaagag 4441 tattattcaa atgtcagggt gttttttgat gtggatatgg atgggaggtt agatgataaa 4501 tatcaggcta ctcataattt tgtaaacatc attacaaagt ttgtagcaga ttacgcctat 4561 aacgattgta agatgataag taatcataga gataaagata aaatgataac tgatatgaaa 4621 tcgaattttt caataaccga gtctaccgat aaagaaaaaa caagttttca tcttatattt 4681 ttcaattgct atactaccct ggatactctc ataaatatgc gtaaaaaatt aattgtattg 4741 acaaaagaat caaataaccg tttagtaaaa gctatagata catcagttta cagacataag 4801 ccatctctta ggatagtggg aactaagaaa gattcgatta acattcacgt tcataaaaag 4861 actaaacaaa atattcattt taaaaattat ctattcacct atgtagatta taatgaagaa 4921 gactgttatt atttcgtcag cgagcaacaa catcaatctc cagatctctt aaactggaaa 4981 gaggaatata taccttttca cgacgctatc aaaaaaatat ctaaagctat aggtaatagc 5041 ataattaatc taaaggatat tacagctgaa aactttacag taactccttt agatatttac 5101 tatgccacgc cttgtaatct atgtaaaaaa gtatctcata aacatcctca tcacttactg 5161 attagtaacg attgtataag aatatataaa tccggaaatc ccaatagctg taagattaaa 5221 actatttcct tagaaggtaa taaattattc agtatttcac agcaaataat agatcttaat 5281 gtaattaatg tttcagatag aggagaatat ctagtttggt tgaaaaacgt gtggagaatg 5341 tgtgaagatg ataataatat aaccaaatta atactatata tgagagatca cttatcatcc 5401 gactgtaccg atttgttact atgtcctaga aatcggaaag tcatagaaca taaccttaaa 5461 gatatgttga tagatacgat agaaaccgac acttatccag aaaaattaca atttcttaac 5521 ggtgtgtatg atataaaaga ttctatattc tatcaaggta atgacgcaaa gaaatttgtt 5581 tgtactgtat caactgggta taaatacgaa gaaggtataa atgttgatga tataactaca 5641 gaactaatgt ctatactaga cgatatccaa ccaaagacaa aggaaaattt tgaaaataga 5701 gaactctacg aacagatact ttcgagttgt ctcatgggta ctacaaaaca atgcatattc 5761 ttcttttatg gagaaacagc tactggaaaa tcgacgacta aaaaattact aaaatctgtc 5821 atgcataata tgtttctaga aaccggtcag gttattctaa cagaacaaat ggataaaggt 5881 cctaatccct ttatcgctaa catgcacttg aagagagtag tattttgtag cgaacttcct 5941 gattttagtt ataatacgtc caaaaaaata agatccgaca atatcaagaa gttaacagaa 6001 ccctgtgtag taggaagatc ttgttattct aataaaatca ataacaggaa tcatgctact 6061 atcataatag ataccaacta taaacccgta ttcgataaag tagataacgc tataatgaga 6121 aggatagctc tagttaattt taaaactcac tttactaata caaaaaagaa ggtgcataac 6181 tcaaagtatg attttattaa accgttaaac gaaagtcttg attcaaaaat tcaatctaat 6241 tattttagat acgcgtttct gaaaatactt ttaggatggt ttagtaaata tcatgttcct 6301 aacttaagaa tattaccaac accagataaa ataccagact ttaagttcag attaaaagta 6361 gaatctctca ttattcctag taattctacg catgtgaaat atgtagataa attaatgaaa 6421 ttaggatata taacagacga tgatggaata cctgtactac aattaaacat atttcaacag 6481 aaattaagtc tccattttaa tgtaaaacta tacgggcaag acattgacag ttttatcatg 6541 aagaataaaa aatatatgaa cttggccgat gaatacatgt cttttatatt catagaagat 6601 ttgaatacta taaatgaacc tagaaatact tgaactcttt aatgggcaca tagataacat 6661 tcctaatatc ttacctcatc aattagctac cttggattat cttttaagga ctatactaga 6721 tcataatgaa agtgttttgt tgtttcatat tatggggtca gggaaaacta ttatagcact 6781 gctatttgca cttatcgtgt caaagtttaa aaaggtttac atattggtac ctaatattaa 6841 tatacttaat atatttacgt ataatttaga tttggcaact aatctcatca atacagaata 6901 tgttattgaa aatattcata tttattcgac gattaatttc tatagtctta actacaacga 6961 taatgtagtg aactacaatg ctttatctaa gtacaacgac tctattttca tcatagacga 7021 ggctcataac atattcggaa acaatacagg tgaattaatg actattatta aaaataagaa 7081 taaggtacct tttcttttac tatcagggtc tcctatcact aatacaccta ttacactatc 7141 taatattatt agtattatgt cggatgaagg tataaacttt aacgatatta taatccaggg 7201 aaagaaagta tttcagataa tattaaacga aaaaggtgta agcgtattaa aaaatattct 7261 gaagaataag atatcctact atgaattatg tgatacggaa ctaccgagta tcatctttca 7321 cggtaaagag tttttagata cgaaagtagt ttattgtaaa atgtctaaac tacaggaaac 7381 tgactacata aacgtacgga aattgtgcaa taatgaaatg tttgaaaaaa acatgacaaa 7441 tgtttcttta gctgtattag gacctttgaa tttggctaat agtttagaac tgttattcgt 7501 agaacaggat aaagaacttt atcctaattt gaaaataaac gacggtgtct tatacggaga 7561 cgaattaact aaacttaata taagctcaaa atttaaatat tttatagata ctatcgggaa 7621 tcttacgggt aaaaatttta tctatttttc taattctaca tacggtggat tagtcatcaa 7681 gtatatcatg cttaacaacg gatattctga atacgccggt tcgcaaggta ccaatccaaa 7741 aatgataaac ggacatctta aaacatttgc tatagtcacg agtaaaatga agtcatcctt 7801 agaagattta ttggaagtgt ataattcccc agggaatgat aacggagaaa agattatgtt 7861 tttattttcc tccaatatta tgtcagaatc atatactttg aaggaagtaa gaaacatctg 7921 gtttatgact atacctgata ctttttcaca atacaatcag attttgggta gatctattag 7981 aaagttctcg tataaagatg tttcgaaacc tgttaacgta tacctattag ctacggttta 8041 ttcagatttt aacgatacaa taacttctct agatgattat agtatagatg atataaatac 8101 tttaccattc gatatcaaaa aactacttta tctaaagttt aaaacgaaag aaacaaaacg 8161 aatttattcc atactaaaag atctatctat aaactataga tcatcacccc atccttatat 8221 aacggatgtt gtattaggcg agctggttag acaatttttt taccacaatt ctagagtaag 8281 tataaacgat gctaaacttt ttaaaatggt aaatagtatt tttaaatcca aagaaaaaac 8341 acaaaaatat atagagaaga taacagacga ccatttcttc gttactaata aagtatttga 8401 aaaatcattg ttatataaac ataaaaaatg atattatagt agtacctttc aatctattgt 8461 ttacagaata ttcttggatg attaatttta gaaagggaac taaatgtcgt tgtttaatac 8521 aaacgcgtat ttacccgtag ttatacaacc ccatgaatta aatttagatc taatggataa 8581 tataaaaaag gcagttataa ataagtattt acacaaggaa acatctgggt ttatggccaa 8641 aaagatacag atagtagaag atacccccat gccattagcg gagttagtta ataatgaaat 8701 agttgttcat gtgacatgta acatagatta taaatactat aaggtaggtg atatagtttc 8761 tggtatacta actattacag acgaatctga tatttcggta gtttgtagtg atctaatttg 8821 taaaatcaga agcgactccg gtactgtttc atatgataat tcaaaatact gtttcataaa 8881 gaacggtaaa gtctacgcta atgaaagtac agttactgtt atgttaaaag aagcccaatc 8941 tggaatggaa tcatcttttg ttttcttagg taacataatt gaaaaataat actttaataa 9001 agattaattt acataatacc tacatcatgt aacgtatagc ttattaaaca tggatagcat 9061 ttagtaatat ttgtaaaatc aaaaataact ataaatattt taatagtata ttgaattctt 9121 tatcatgtag aaagatatta gttatacaca caatgatatg taaaaatagt attcgacata 9181 aagaattgac gttgataata tttctctgct ttatatatct atcaaaaact tttgtagaag 9241 taaaagcacc tccctatgta ctcgtaccgg aaggtagtga tataaatctt acttgtttta 9301 ttaaagatga tcagggtgct ggagaagata aagtaattgt agcgtggcaa cagggtgacg 9361 gagaagttac tcaaggaata aaaacaactt gggatacgac acgacaagtg ggccaaacca 9421 tgctacatat atccaaggta tctaaagaag cagaaggttc atatatgtgt gttgtatgga 9481 taaacggcga cgctgattat aaaaaaatga atctaggagt gtttactgtt tcaaaaaaaa 9541 cctacatgca taacgaagta agtataaccc ctcgaagatc gagagtagat atgtcggatg 9601 gtcggccgct aaaaattgaa tgtgctttta gtacccgacg aatatatggt agaagccaag 9661 tcaacataaa atggtggaag attgacggta ttacacgaaa atgggaacaa cagacttcgg 9721 gagttaactt actgttacat acttatggag ggataggatc gctaagtatc ccaaatccta 9781 caacaggaga atcaacaggt aagtatatgt gcgtagttac ctgtggagat attggaaatg 9841 ttggatttag actggtaaaa tcattatctc ctttatcaga tacagaatct gatcatagtt 9901 atacttcaga ggaaggatca cattttatgg aaagatgcaa agtcaaaaaa agtccgtacg 9961 gtggatggat agtagaatag atcatctcag ggacgcggta tatattgcta taaagtaaaa 10021 taatttctca atacattttt ctactttaac gatataatcg ttaacttatt agtttaatta 10081 tatcatatat tcctttatat cttaattaaa aaaatatatt cataaatggg atacactagt 10141 atttttttat atagtttacg atatgctatt tcactatata tagtttatca aacataagtg 10201 aaaaataaac aactataaaa actaagatca tgttcgatat atccagagaa caacaaaata 10261 tgttagaaaa aaataaagat tgtgttatta ctttcgaaac aaatagagaa agaataacta 10321 tagaaaacac taacataaaa gatatactta gcgatagacg aattcacata ttcgcgttat 10381 gtattacatc agataatata cctataatcg gtataagaag aacgtctttt atgtatcaat 10441 cggttatatc aaaaagaaga agctt //