GenBank-Updates@genbank.bio.net (05/17/91)
LOCUS HUMPGECP8 3536 bp ds-DNA PRI 17-MAY-1991
DEFINITION Human snRNP E protein pseudogene CP8.
ACCESSION M65125 M25910
KEYWORDS E protein; pseudogene; small nuclear ribonucleoprotein; snRNP.
SOURCE Human DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 3536)
AUTHORS Stanford,D.R., Holicky,E.L., Perry,C.A., Rehder,K.J., Harvey,S.E.,
Rohleder,A.M. and Wieben,E.D.
TITLE The snRNP E protein multigene family contains five pseudogenes with
common mutations
JOURNAL DNA (1991) In press
STANDARD full staff_entry
FEATURES Location/Qualifiers
repeat_unit 1047..1054
/rpt_type=direct
CDS 1054..1541
/pseudo
/codon_start=1054
promoter 1108..1114
/note="translation initiation sequence"
polyA_signal 1509..1514
polyA_site 1534..1534
repeat_unit 1537..1545
/rpt_type=direct
repeat_region 1800..2000
/rpt_family="FokI"
BASE COUNT 1061 a 771 c 698 g 1006 t
ORIGIN
1 aagcttgagc tagcctgctg atcccaggca gagaatgacc cacacctgga gtggtgcccc
61 tgcaactagc ctagcctgat cagccaatcc ccagccaagc cacacacgtg tgagctaaat
121 gtatccttat tgttgactta ttttttaaat atccactagg gatttttttt atgaagcata
181 agggctctgg tataaccatg aaaaccttga agtgttttca gaattttgtg acaataagaa
241 attttctggg gaaacggttt tcagttttca gggaattctt aaagctgcgt ctgacctaag
301 ggaaattaga aagtccctgt aactgttaac cacgcctacc tgtactcagc cacaagctga
361 agactccaaa gtcatcctta gctcttctgt acttcctgct gtctcttccc aactcccatt
421 tggttgtatc atgctagaaa cttgaaatca gccatggggg aagtacttat accacctaaa
481 ttggaaaaca ctacaaacca aggcttccca atttcccatc ccctcccaga gagtcagctt
541 accagcattc atgcttccca caatcagctg gggtcaagtc ctcttactcc tttgatatca
601 gcagcacctc ttgcaagtgg tccctattcc acaacctcac aaggacatcc tcaccatcct
661 tgcacaggga gcagcctaga gctgcagggt gcatgtcaga gtcaaatgat ttatggctga
721 ttccaagctc agctacttag cagttacatg atcctagcaa gttcgttaaa ctctgtaagc
781 atccttctcc ccatctgtga aatggcaaat aaaaaatagt atctaactct tagggtcatt
841 aggaggattc agtgaaatga ctcaggcaaa gcatgtagca ctgagcctga cacctcctaa
901 gcacacgata ggtgacagct ctcatgactt ggttgtgtca catcatcttt tgcctcaatt
961 atttgcaaca ccttccaaca gactttcctc ttgttggtct tgcccctttc actctatcct
1021 ctccacagca gacagagaaa atggggaaaa ataattccag aagttgctct cagaggcagc
1081 gtgtagctgt gctctttgta aaattccacc atggcgtacc atggccagga ccagagagtg
1141 cagagggtta tggtactgcc catcaacctc atcttcagat acttacaaaa tagatcatgg
1201 attcaggtgt ggctctatga gcaagtgaat atgtggatag aaggctgtat cattggtttt
1261 gataagtata tgaatcttgt attagatgat gcagaagaga ttcattctaa aacaaagtca
1321 agaaaacaac tgggtcggat catactaaaa ggagataata ttcctctgct acaaagtgtc
1381 tccaactaga aatgatcaac gaagtgagaa actgttgaga aggatacagt ttgttttgag
1441 atgtcctttg tccaatataa acatttattc atattgtttt gattaccctt atgttattac
1501 aagaagggaa taaatgctat gggattatta gtataaaaaa atgaaagttg ggggggaaaa
1561 aagcacaaat acacttgtgt tactcccttg ctcagaactc tccagtgatt tctcctttgc
1621 cttcaggaga cagtctcaat ttataaatgg ggaaactgga gtttgaagag gttaaaacat
1681 ttgcccaaag ccacacaggt agtaaatgac ataggatttc aacccagact ttccatgtcc
1741 acattctacc tttttcacca ctaagatata ccaaggataa aagaataggt gattacaagg
1801 tatggatggg tgaacagatg aaattacaaa agggacagaa acacaggata gaagcatgag
1861 tggaagtcta gaaggaaagg atgggtggat ggatgaatgg aagggtcgaa agatagagga
1921 atagaaagac agaagaataa atagactgaa ggatgaaaat atggagggat tctcctgagt
1981 tgcattcact ccctctgtct tacctaggtt tacctagcaa gggttctgtc cctggacacc
2041 tacctgagac atttgctgag aacacagcaa atcctatgga cacttccatt tcctagctgt
2101 tagtttcctt ttcctccatc tgttcaaacc cagttcatct ctgaacaggt ctctcttggt
2161 aaccagcttc caggaactga ccacttctgt cttcttccag aagctcaggt ttttcgatga
2221 ccagggacca aattttgaat cttaagaacg aacattcact aggcaagtac ttactgtatg
2281 ctaattgtat aattctgtca tttaatcttc acaacacact tacacggtag gtactgtaat
2341 cctctccatt ctgaagatga agaaatagag tcacagagat ctcacataat ttactcaaag
2401 ttgcaaaact acagagtggt acatcccagg attgctgagg caatcagaac ccgaggtgtg
2461 cacacataat gactacacta tactttttct ctctttagct acctcaactg gtagctccat
2521 tccccgtatt tggatggaaa atctattatc agtccatgag gactagagtc acattatctg
2581 ttaagccctt acctatggca tttctcatgc acctaccaat ttatactgaa caatagtcat
2641 gatgaacagc cactaagtgc aagttacaaa agtttcacca ttatgaaacc ataaccctat
2701 atgccacaaa ggcacctccc acattgatta aagggccact ggcattttga gaaaaacagt
2761 cctatcagtg acatagccta gttggaacaa aagatccaca gaattgtgat gaatgagact
2821 gtgggcaagc acccatctaa tttggttgaa aatataccac agtggtttca gaatctggcc
2881 aacctggatt ctggctccag ctctgtcatt tggttaagat atgtgatgtc agccagtact
2941 tgacatctct gagcctcaat tttcttatat gcaaaatggg gggaataata gcagcttgta
3001 tgaatagatg taagaatgaa tgagataacc cgtacaaagg gcttagtaca atcagaaata
3061 cacaattgat cattatcatg gtgtggttgt tatatccaga ccgctggagc aactatgttt
3121 ctctccatct ctctctctct ctgtccccct ctgtgtgtat gtgtgtgtgt tcaaacaaag
3181 caaaaaatca aattcagcac acttcgacca aaggtccaat cctctttcct ctgtttgttt
3241 gtttttcctt ttccagaagc ttcccaaagt cctcctgcca gagaatcagt tgggtgaact
3301 cctcctctgg cttgattaac ttccccttgt taactgaccg ggttcaatgc aatttaattt
3361 cattgagagg aagtggttca gaaatcaggg tcatttaatt tctgaaaggc gagtgaaatg
3421 ttgcctttcc caagtgatct ttctgccatt tgttcctgtt aaaatgaaaa gtacagtggt
3481 taatacaatg gcttcaaggt tatgttagat cacctttgca agtaagagaa gaattc
//GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS HUMPGECP8 3536 bp ds-DNA PRI 22-MAY-1991
DEFINITION Human snRNP E protein pseudogene CP8.
ACCESSION M65125 M25910
KEYWORDS E protein; pseudogene; small nuclear ribonucleoprotein; snRNP.
SOURCE Human fetal liver DNA, clone CP8 and peripheral blood leukocyte
DNA, clone LH1.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 3536)
AUTHORS Stanford,D.R., Holicky,E.L., Perry,C.A., Rehder,K.J., Harvey,S.E.,
Rohleder,A.M. and Wieben,E.D.
TITLE The snRNP E protein multigene family contains five pseudogenes with
common mutations
JOURNAL DNA Sequence (1991) In press
STANDARD full staff_entry
FEATURES Location/Qualifiers
repeat_unit 1047..1054
/rpt_type=direct
mRNA 1054..1541
/pseudo=gene
CDS 1111..1389
/pseudo=gene
/codon_start=1111
allele 1235..1235
/note="replace (1235, 'a'), in clone LH1"
polyA_signal 1509..1514
polyA_site 1534..1534
repeat_unit 1537..1545
/rpt_type=direct
repeat_region 1800..2000
/rpt_family="FokI"
BASE COUNT 1061 a 771 c 698 g 1006 t
ORIGIN
1 aagcttgagc tagcctgctg atcccaggca gagaatgacc cacacctgga gtggtgcccc
61 tgcaactagc ctagcctgat cagccaatcc ccagccaagc cacacacgtg tgagctaaat
121 gtatccttat tgttgactta ttttttaaat atccactagg gatttttttt atgaagcata
181 agggctctgg tataaccatg aaaaccttga agtgttttca gaattttgtg acaataagaa
241 attttctggg gaaacggttt tcagttttca gggaattctt aaagctgcgt ctgacctaag
301 ggaaattaga aagtccctgt aactgttaac cacgcctacc tgtactcagc cacaagctga
361 agactccaaa gtcatcctta gctcttctgt acttcctgct gtctcttccc aactcccatt
421 tggttgtatc atgctagaaa cttgaaatca gccatggggg aagtacttat accacctaaa
481 ttggaaaaca ctacaaacca aggcttccca atttcccatc ccctcccaga gagtcagctt
541 accagcattc atgcttccca caatcagctg gggtcaagtc ctcttactcc tttgatatca
601 gcagcacctc ttgcaagtgg tccctattcc acaacctcac aaggacatcc tcaccatcct
661 tgcacaggga gcagcctaga gctgcagggt gcatgtcaga gtcaaatgat ttatggctga
721 ttccaagctc agctacttag cagttacatg atcctagcaa gttcgttaaa ctctgtaagc
781 atccttctcc ccatctgtga aatggcaaat aaaaaatagt atctaactct tagggtcatt
841 aggaggattc agtgaaatga ctcaggcaaa gcatgtagca ctgagcctga cacctcctaa
901 gcacacgata ggtgacagct ctcatgactt ggttgtgtca catcatcttt tgcctcaatt
961 atttgcaaca ccttccaaca gactttcctc ttgttggtct tgcccctttc actctatcct
1021 ctccacagca gacagagaaa atggggaaaa ataattccag aagttgctct cagaggcagc
1081 gtgtagctgt gctctttgta aaattccacc atggcgtacc atggccagga ccagagagtg
1141 cagagggtta tggtactgcc catcaacctc atcttcagat acttacaaaa tagatcatgg
1201 attcaggtgt ggctctatga gcaagtgaat atgtggatag aaggctgtat cattggtttt
1261 gataagtata tgaatcttgt attagatgat gcagaagaga ttcattctaa aacaaagtca
1321 agaaaacaac tgggtcggat catactaaaa ggagataata ttcctctgct acaaagtgtc
1381 tccaactaga aatgatcaac gaagtgagaa actgttgaga aggatacagt ttgttttgag
1441 atgtcctttg tccaatataa acatttattc atattgtttt gattaccctt atgttattac
1501 aagaagggaa taaatgctat gggattatta gtataaaaaa atgaaagttg ggggggaaaa
1561 aagcacaaat acacttgtgt tactcccttg ctcagaactc tccagtgatt tctcctttgc
1621 cttcaggaga cagtctcaat ttataaatgg ggaaactgga gtttgaagag gttaaaacat
1681 ttgcccaaag ccacacaggt agtaaatgac ataggatttc aacccagact ttccatgtcc
1741 acattctacc tttttcacca ctaagatata ccaaggataa aagaataggt gattacaagg
1801 tatggatggg tgaacagatg aaattacaaa agggacagaa acacaggata gaagcatgag
1861 tggaagtcta gaaggaaagg atgggtggat ggatgaatgg aagggtcgaa agatagagga
1921 atagaaagac agaagaataa atagactgaa ggatgaaaat atggagggat tctcctgagt
1981 tgcattcact ccctctgtct tacctaggtt tacctagcaa gggttctgtc cctggacacc
2041 tacctgagac atttgctgag aacacagcaa atcctatgga cacttccatt tcctagctgt
2101 tagtttcctt ttcctccatc tgttcaaacc cagttcatct ctgaacaggt ctctcttggt
2161 aaccagcttc caggaactga ccacttctgt cttcttccag aagctcaggt ttttcgatga
2221 ccagggacca aattttgaat cttaagaacg aacattcact aggcaagtac ttactgtatg
2281 ctaattgtat aattctgtca tttaatcttc acaacacact tacacggtag gtactgtaat
2341 cctctccatt ctgaagatga agaaatagag tcacagagat ctcacataat ttactcaaag
2401 ttgcaaaact acagagtggt acatcccagg attgctgagg caatcagaac ccgaggtgtg
2461 cacacataat gactacacta tactttttct ctctttagct acctcaactg gtagctccat
2521 tccccgtatt tggatggaaa atctattatc agtccatgag gactagagtc acattatctg
2581 ttaagccctt acctatggca tttctcatgc acctaccaat ttatactgaa caatagtcat
2641 gatgaacagc cactaagtgc aagttacaaa agtttcacca ttatgaaacc ataaccctat
2701 atgccacaaa ggcacctccc acattgatta aagggccact ggcattttga gaaaaacagt
2761 cctatcagtg acatagccta gttggaacaa aagatccaca gaattgtgat gaatgagact
2821 gtgggcaagc acccatctaa tttggttgaa aatataccac agtggtttca gaatctggcc
2881 aacctggatt ctggctccag ctctgtcatt tggttaagat atgtgatgtc agccagtact
2941 tgacatctct gagcctcaat tttcttatat gcaaaatggg gggaataata gcagcttgta
3001 tgaatagatg taagaatgaa tgagataacc cgtacaaagg gcttagtaca atcagaaata
3061 cacaattgat cattatcatg gtgtggttgt tatatccaga ccgctggagc aactatgttt
3121 ctctccatct ctctctctct ctgtccccct ctgtgtgtat gtgtgtgtgt tcaaacaaag
3181 caaaaaatca aattcagcac acttcgacca aaggtccaat cctctttcct ctgtttgttt
3241 gtttttcctt ttccagaagc ttcccaaagt cctcctgcca gagaatcagt tgggtgaact
3301 cctcctctgg cttgattaac ttccccttgt taactgaccg ggttcaatgc aatttaattt
3361 cattgagagg aagtggttca gaaatcaggg tcatttaatt tctgaaaggc gagtgaaatg
3421 ttgcctttcc caagtgatct ttctgccatt tgttcctgtt aaaatgaaaa gtacagtggt
3481 taatacaatg gcttcaaggt tatgttagat cacctttgca agtaagagaa gaattc
//