GenBank-Updates@genbank.bio.net (05/17/91)
LOCUS HUMPGEPEB 2863 bp ds-DNA PRI 17-MAY-1991 DEFINITION Human snRNP E protein pseudogene EB. ACCESSION M65126 M25911 KEYWORDS E protein; pseudogene; small nuclear ribonucleoprotein; snRNP. SOURCE Human DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 2863) AUTHORS Stanford,D.R., Holicky,E.L., Perry,C.A., Rehder,K.J., Harvey,S.E., Rohleder,A.M. and Wieben,E.D. TITLE The snRNP E protein multigene family contains five pseudogenes with common mutations JOURNAL DNA (1991) In press STANDARD full staff_entry FEATURES Location/Qualifiers repeat_unit 999..1012 /rpt_type=direct repeat_unit 1013..1330 /rpt_family="Alu" repeat_unit 1328..1341 /rpt_type=direct repeat_unit 1467..1480 /rpt_type=direct CDS 1480..1954 /pseudo /codon_start=1480 promoter 1511..1517 /note="translation initiation sequence" polyA_signal 1914..1919 polyA_site 1941..1941 repeat_unit 1951..1964 /rpt_type=direct BASE COUNT 862 a 621 c 600 g 780 t ORIGIN 1 gagctcattg taagaaacag ttactgccta gtacagcagt ctgttaacta gtctctccat 61 ttttgattgc tccatgcccc aattgttaat gggcattgct aacaccagct tccctacagt 121 gcagttttga gcagtccata aaccagactc cagccccctc agcagtcatt ggtctccttt 181 cctgcttgcc caatcttatc gcctgttgct ccctgtcaaa atgaatattt ctggttcctc 241 agatattttt gctaatacta ttgcttttgc tgggaaactg ttaccacatc ctaaatttcg 301 tatggaaaaa ctttacctaa ctgttaaatt cccagctgag caccgtctcc ttcattaagc 361 cattagtgac tattgcctgt tccaggcgaa tttgtcactc ttttgaacta cagtattttc 421 cacatgccat gggtattatg gttgttgata tttatgtcct atttactaaa caaaagtata 481 cacatatttg aggcaatata agcaagcaaa ctggcagccc acactgtatt ttcagaattg 541 ggattttttt ttaacataaa aatcctgatt ttcatcttct cttgaaaggt cagaagatct 601 agcttacatc ctcaaagaca ggtcagcaag ccacagcctg tggcaaatct gacctggact 661 ctgtttttag aaataaagtt tgattggaac acagccccac ccatttgttt atatattcac 721 agtggatgct ttccttttac tgtggcagag gtgagtagtt gagacagaga ctctatggcc 781 tagaaagcct atttgctatc cagcccttta caaaaaaagt ttgaccaact cctgctacaa 841 ggcaccaacc tgtggagtga tgcacgtact ccaggacctc ttcctactcc atatcagacc 901 tggccagttg caagtattta tcctgtcttc caaggccttt gaaatactag agtttttcat 961 tcttcttaat cctcttgatc atatcctaac acaatatgaa agccattatg ccgggtggct 1021 ctggctagga caagcctgta atccaaacac tttaggaggc tgaggcaggc ggatcacctg 1081 aggtcaggag tttgagacca gcctggccaa tatggtgaaa ccctgtctct actaaaaata 1141 caaaaattag ccaggcatgg tggcacgcat ctgtaaccct agctacttgg gtggctgagg 1201 caggacaatc gcttgaacct gggaggtgaa gtttgcagtg agcaaagatt gtaccactgc 1261 attccaactg cattccagcc tgggcgacag agctagactc tgtctccaaa aaaaaaaaaa 1321 aaaaaaaaaa gccattatgc cataaaggca aggcaatctc taaaataaat attcaaaacg 1381 attacactgc caatataaat taaatgatca actctaatca tagtcctcag taactatagc 1441 tactgataaa gtaggttctt agagttaaaa gcttgaaatc agcgggtggg tgtgctcttt 1501 gtgaaattcc accatggcat accatggcca gggccagaaa gtgcagaagg ttatggtgca 1561 gcccatcaat ctcatcttca gataaactta caaaatagat cgcagattca ggtgtggctc 1621 tatgagcaag tgaatatgcg gatagaaggc tgtatcatta gttttgatga gtatatgaac 1681 cttgtattag atgatacaga agagattcat tctaaaacaa agtcatgaat acgaccgagt 1741 cggatcatgc taaaaggaca taatattact ctgctacgaa gtttctccaa ctagaaatga 1801 acaatgaagt gagaaattgt tgagatggat acagtttgtt tttagatgtt ttttgtccaa 1861 tatgaacatt tattcgtatt gttttgatta cccttatgtt attacaagat ggcaataaat 1921 gctatgggat tgtttgtatt taaaaaaaaa aaaagctcaa agtctaaagt cagattgcct 1981 ggactcatac tccagctgtg ccacctatgt gagctgggtg agtctttgtt tccttgtctg 2041 aatataatga ggataacagc agtgcctacc ttggattgat gaaaggagtc cattgcaact 2101 aatatttagt gatagctact ttgtgtcagg cactgtgcta ggctcttggg agcatcagtg 2161 agcaaaacag ccacatttcc acttagaaga gcttaactta ggaagatgtt gggggaaatg 2221 gagcaggcag cagacaccac tgatacctgt tgcacagcca cttgggccac cactgagttc 2281 agccacagcc ataggggaaa gcttcgactc ttctctggct ccaaagcctt ctccaatgca 2341 gcgatgtagc tggaaccagt ttggctctca ggcaagcaca acctggaagg gaggaattaa 2401 tgcccagagg cagcccccaa caaggtgggc caggagttgg cgatagagga tatggccccc 2461 gtccttagaa gaacaactct gggaggcatt ctgtatgacc ccttgtagag gtcctggagg 2521 ataaagctcc agagtaagga gagacgctag taacacccta catgacttga ctttcctgct 2581 accttccctc tttctggcaa cattatccaa ataaactatc tgtatccaaa cctgtttcat 2641 gtgcggcctt tggaggaaat ccaaagaaga acaaattgta aacaaacaaa aacaaaaaaa 2701 caatacaaaa aagtagtaag tgccatgcag agaatgaaaa caggtgtgaa caaagtgagt 2761 gatcagacac cccctgacaa tggggccatg gaatgcctcc attgagagct gagtgacagg 2821 aggaatccag ccatgccccg gctagaggat gaatactctg cag //
GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS HUMPGEPEB 2863 bp ds-DNA PRI 22-MAY-1991 DEFINITION Human snRNP E protein pseudogene EB. ACCESSION M65126 M25911 KEYWORDS E protein; pseudogene; small nuclear ribonucleoprotein; snRNP. SOURCE Human fetal liver DNA, clone EB and peripheral blood leukocyte DNA, clone LH66. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 2863) AUTHORS Stanford,D.R., Holicky,E.L., Perry,C.A., Rehder,K.J., Harvey,S.E., Rohleder,A.M. and Wieben,E.D. TITLE The snRNP E protein multigene family contains five pseudogenes with common mutations JOURNAL DNA Sequence (1991) In press STANDARD full staff_entry FEATURES Location/Qualifiers repeat_unit 999..1012 /rpt_type=direct repeat_unit 1013..1330 /rpt_family="Alu" repeat_unit 1328..1341 /rpt_type=direct repeat_unit 1467..1480 /rpt_type=direct mRNA 1480..1954 /pseudo=gene CDS 1514..1585 /pseudo=gene /codon_start=1514 polyA_signal 1914..1919 polyA_site 1941..1941 repeat_unit 1951..1964 /rpt_type=direct allele 2780..2780 /note="replace (2780, 'c'), in clone LH66" BASE COUNT 862 a 621 c 600 g 780 t ORIGIN 1 gagctcattg taagaaacag ttactgccta gtacagcagt ctgttaacta gtctctccat 61 ttttgattgc tccatgcccc aattgttaat gggcattgct aacaccagct tccctacagt 121 gcagttttga gcagtccata aaccagactc cagccccctc agcagtcatt ggtctccttt 181 cctgcttgcc caatcttatc gcctgttgct ccctgtcaaa atgaatattt ctggttcctc 241 agatattttt gctaatacta ttgcttttgc tgggaaactg ttaccacatc ctaaatttcg 301 tatggaaaaa ctttacctaa ctgttaaatt cccagctgag caccgtctcc ttcattaagc 361 cattagtgac tattgcctgt tccaggcgaa tttgtcactc ttttgaacta cagtattttc 421 cacatgccat gggtattatg gttgttgata tttatgtcct atttactaaa caaaagtata 481 cacatatttg aggcaatata agcaagcaaa ctggcagccc acactgtatt ttcagaattg 541 ggattttttt ttaacataaa aatcctgatt ttcatcttct cttgaaaggt cagaagatct 601 agcttacatc ctcaaagaca ggtcagcaag ccacagcctg tggcaaatct gacctggact 661 ctgtttttag aaataaagtt tgattggaac acagccccac ccatttgttt atatattcac 721 agtggatgct ttccttttac tgtggcagag gtgagtagtt gagacagaga ctctatggcc 781 tagaaagcct atttgctatc cagcccttta caaaaaaagt ttgaccaact cctgctacaa 841 ggcaccaacc tgtggagtga tgcacgtact ccaggacctc ttcctactcc atatcagacc 901 tggccagttg caagtattta tcctgtcttc caaggccttt gaaatactag agtttttcat 961 tcttcttaat cctcttgatc atatcctaac acaatatgaa agccattatg ccgggtggct 1021 ctggctagga caagcctgta atccaaacac tttaggaggc tgaggcaggc ggatcacctg 1081 aggtcaggag tttgagacca gcctggccaa tatggtgaaa ccctgtctct actaaaaata 1141 caaaaattag ccaggcatgg tggcacgcat ctgtaaccct agctacttgg gtggctgagg 1201 caggacaatc gcttgaacct gggaggtgaa gtttgcagtg agcaaagatt gtaccactgc 1261 attccaactg cattccagcc tgggcgacag agctagactc tgtctccaaa aaaaaaaaaa 1321 aaaaaaaaaa gccattatgc cataaaggca aggcaatctc taaaataaat attcaaaacg 1381 attacactgc caatataaat taaatgatca actctaatca tagtcctcag taactatagc 1441 tactgataaa gtaggttctt agagttaaaa gcttgaaatc agcgggtggg tgtgctcttt 1501 gtgaaattcc accatggcat accatggcca gggccagaaa gtgcagaagg ttatggtgca 1561 gcccatcaat ctcatcttca gataaactta caaaatagat cgcagattca ggtgtggctc 1621 tatgagcaag tgaatatgcg gatagaaggc tgtatcatta gttttgatga gtatatgaac 1681 cttgtattag atgatacaga agagattcat tctaaaacaa agtcatgaat acgaccgagt 1741 cggatcatgc taaaaggaca taatattact ctgctacgaa gtttctccaa ctagaaatga 1801 acaatgaagt gagaaattgt tgagatggat acagtttgtt tttagatgtt ttttgtccaa 1861 tatgaacatt tattcgtatt gttttgatta cccttatgtt attacaagat ggcaataaat 1921 gctatgggat tgtttgtatt taaaaaaaaa aaaagctcaa agtctaaagt cagattgcct 1981 ggactcatac tccagctgtg ccacctatgt gagctgggtg agtctttgtt tccttgtctg 2041 aatataatga ggataacagc agtgcctacc ttggattgat gaaaggagtc cattgcaact 2101 aatatttagt gatagctact ttgtgtcagg cactgtgcta ggctcttggg agcatcagtg 2161 agcaaaacag ccacatttcc acttagaaga gcttaactta ggaagatgtt gggggaaatg 2221 gagcaggcag cagacaccac tgatacctgt tgcacagcca cttgggccac cactgagttc 2281 agccacagcc ataggggaaa gcttcgactc ttctctggct ccaaagcctt ctccaatgca 2341 gcgatgtagc tggaaccagt ttggctctca ggcaagcaca acctggaagg gaggaattaa 2401 tgcccagagg cagcccccaa caaggtgggc caggagttgg cgatagagga tatggccccc 2461 gtccttagaa gaacaactct gggaggcatt ctgtatgacc ccttgtagag gtcctggagg 2521 ataaagctcc agagtaagga gagacgctag taacacccta catgacttga ctttcctgct 2581 accttccctc tttctggcaa cattatccaa ataaactatc tgtatccaaa cctgtttcat 2641 gtgcggcctt tggaggaaat ccaaagaaga acaaattgta aacaaacaaa aacaaaaaaa 2701 caatacaaaa aagtagtaag tgccatgcag agaatgaaaa caggtgtgaa caaagtgagt 2761 gatcagacac cccctgacaa tggggccatg gaatgcctcc attgagagct gagtgacagg 2821 aggaatccag ccatgccccg gctagaggat gaatactctg cag //