GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS TRCGAP 3629 bp ds-DNA INV 22-MAY-1991
DEFINITION T. cruzi gap gene for glyceraldehyde-3-phosphate dehydrogenase
(gGAPDH)
ACCESSION X52898
KEYWORDS gap gene; glyceraldehyde 3-phosphate-dehydrogenase;
glycosomal protein; retroposon.
SOURCE Trypanosoma cruzi DNA.
ORGANISM Trypanosoma cruzi
Eukaryota; Animalia; Protozoa; Sarcomastigophora; Mastigophora;
Kinetoplastida; Trypanosomatina; Trypanosomatidae.
REFERENCE 1 (bases 1 to 3629)
AUTHORS Kendall,G.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 3628)
AUTHORS Kendall,G., Wilderspin,A.F., Ashall,F., Miles,M.A. and Kelly,J.M.
TITLE Trypanosoma cruzi glycosomal glyceraldehyde-3-phosphate
dehydrogenase does not conform to the 'hotspot' topogenic signal
model
JOURNAL EMBO J. 9, 2751-2758 (1990)
STANDARD full automatic
COMMENT From EMBL 26 entry TCGAP; dated 12-MAR-1991.
FEATURES Location/Qualifiers
misc_feature 189..281
/note="truncated retroposon-like element"
mRNA 237..>1416
/note="gene I"
/gene="GAP"
CDS 303..1382
/EC_number="1.2.1.12"
/note="gene I"
/product="glyceraldehyde 3-phosphate dehydrogenase"
/gene="GAP"
/codon_start=303
misc_feature 1528..3011
/note="retroposon-like element"
repeat_region 1528..1536
/rpt_type=direct
mRNA 1831..>3011
/note="gene II"
/gene="GAP"
repeat_region 1867..1875
/rpt_type=direct
CDS 1897..2976
/EC_number="1.2.1.12"
/note="gene II"
/product="glyceraldehyde 3-phosphate dehydrogenase"
/gene="GAP"
/codon_start=1897
misc_feature 3122..3325
/note="truncated retroposon-like element"
BASE COUNT 882 a 852 c 955 g 940 t
ORIGIN
1 gtctattaga caagagcaca acaattctca ttgcattcag aagcaaacaa acaaacaaaa
61 acaaaatgcg gaaaatacct caaatttatt ttatgtctgt cctctacaaa taataataat
121 aataataata attacagcgg ccgtaaatga atgcaagaaa agaaacacaa aacccacaat
181 tgtcaacctc cccttcattc cacttgtctc tcttttccca cgtttcctgc acgaatgcag
241 aaagtgatat ttttactttg aaagccatct accaacaaca attacattga acagaattta
301 aaatgcccat caaggtcggt atcaacggct ttggccgcat cggacgcatg gtctttcagg
361 ccttgtgtga ggacggcctt ctcgggacgg agattgacgt cgtggcggtg gtcgatatga
421 acacggatgc cgagtacttt gcgtaccaga tgcgttacga caccgtgcat ggcaagttca
481 agtacgaggt gacgacgacg aagagcagcc cctccgttgc gaaggacgac acgcttgtgg
541 tgaatggcca ccgtatcctg tgcgtgaagg cgcagcggaa cccggcggat ctcccatggg
601 gcaagcttgg tgtggagtac gtaattgaat caacgggcct gttcaccgcc aaggcggcgg
661 cggagggcca cctgcgcggc ggtgcacgga aggtcgtcat cagcgctccc gcctctggtg
721 gcgccaagac acttgtgatg ggcgtgaacc atcacgagta caaccccagt gagcaccacg
781 ttgtgtctaa cgcgtcatgc acgaccaatt gccttgcgcc cattgtgcac gtcctggtga
841 aggagggatt cggcgtgcag accggcctca tgacgacgat ccactcgtac acagcaacgc
901 agaagacggt ggacggtgtg tcggtgaagg actggcgtgg cggtcgtgcg gctgctgtca
961 acatcattcc gagcacgact ggtgcggcga aggcggtggg catggtgatt ccgagcaccc
1021 agggcaagct gacgggcatg tcttttcgtg tccccacccc ggacgtgtcc gtggtggatc
1081 tcaccttcac tgcggcgcgc gacaccagca tacaggagat cgacgccgcc ctgaagcgcg
1141 cgtctaagac ttacatgaaa ggaattctcg gctacacgga cgaggagctt gtgagtgcag
1201 acttcattaa tgacaaccgc agctccattt acgactccaa ggcaacgctg cagaacaacc
1261 tgccgaagga gcgccgcttc ttcaagattg tgtcgtggta cgacaacgag tggggatact
1321 cccaccgcgt ggtggacctt gtacgccaca tggcctcgaa ggatcgttcg gcaaggttgt
1381 aggcgtggcg atgacttcag gtctttcttt tgcgaatagg gatcttataa tacacgatgc
1441 gtgtcccgtg atgatcgtta ccggtgctgc cacgatccaa ttgacacagc gtcaagagca
1501 aaacaatttt acttttccct ttaaggacaa caacaaaaaa atatataact tttttttctt
1561 tttttttttt ttttgaaatt atatttatgg tcatctttgg gaaacaaaaa gcagcaattt
1621 aatgatgcgg aaggatgagt gaaataatgt ttaatcaatg tacgaggatt tggggtattg
1681 caaggaaaat gtagatgatt taattgggtg tgtgatgcag cttgtggtaa tttttgctca
1741 cttccctttt tgccacatct ttttagtttt tctgcttttc tttccccatt attccacttg
1801 tctctctttt cccacgtttc ctgcacgaat gcagaaagtg atatttttac tttgaaagcc
1861 atctaccaac aacaattaca ttgaacagaa tttaaaatgc ccatcaaggt cggtatcaac
1921 ggctttggcc gcatcggacg catggtcttt caggccttgt gtgaggacgg ccttctcggg
1981 acggagattg acgtcgtggc ggtggtcgat atgaacacgg atgccgagta ctttgcgtac
2041 cagatgcgtt acgacaccgt gcatggcaag ttcaagtacg aggtgacgac gacgaagagc
2101 agcccctccg ttgcgaagga cgacacgctt gtggtgaatg gccaccgtat cctgtgcgtg
2161 aaggcgcagc ggaacccggc ggatctccca tggggcaagc ttggtgtgga gtacgtaatt
2221 gaatcaacgg gcctgttcac cgccaaggcg gcggcggagg gccacctgcg cggcggtgca
2281 cggaaggtcg tcatcagcgc tcccgcctct ggtggcgcca agacacttgt gatgggcgtg
2341 aaccatcacg agtacaaccc cagtgagcac cacgttgtgt ctaacgcgtc atgcacgacc
2401 aattgccttg cgcccattgt gcacgtcctg gtgaaggagg gattcggcgt gcagaccggc
2461 ctcatgacga cgatccactc gtacacagca acgcagaaga cggtggacgg tgtgtcggtg
2521 aaggactggc gtggcggtcg tgcggctgct gtcaacatca ttccgagcac gactggtgcg
2581 gcgaaggcgg tgggcatggt gattccgagc acccagggca agctgacggg catgtctttt
2641 cgtgtcccca ccccggacgt gtccgtggtg gatctcacct tcactgcggc gcgcgacacc
2701 agcatacagg agatcgacgc cgccctgaag cgcgcgtcta agacttacat gaaaggaatt
2761 ctcggctaca cggacgagga gcttgtgagt gcagacttca ttaatgacaa ccgcagctcc
2821 atttacgact ccaaggcaac gctgcagaac aacctgccga aggagcgccg cttcttcaag
2881 attgtgtcgt ggtacgacaa cgagtgggga tactcccacc gcgtggtgga ccttgtacgc
2941 cacatggcct cgaaggatcg ttcggcaagg ttgtaggcgt ggcgatgact tcaggtcttt
3001 cttttgcgaa tagggatctt ataatacacg atgcgtgtcc cgtgatgatc gttaccggtg
3061 ctgccacgat ccaagtgaca cagtgtcaag agcaaaacaa ttttactttt ccctttaagg
3121 acaacaacaa aaaaatatat aacttttttt tctttttttt tttttgaaat tatatttatg
3181 gtcatctttg ggaaacaaaa agcagcaatt taatgatgcg gaaggatgag tgaaataatg
3241 tttaatcaat gtacgaggat ttggggtatt gcaaggaaaa tgtagatgat ttagttgggt
3301 gtatgatgca gcttgtggta attttttaca actttgcgtt attggaagat tttggttgtt
3361 cagtttcttt ttgtttataa ctgactgttt taatttagtg tgattttttt tttttaagga
3421 tttaagctgt ttttcttttt ttttcttttt cttcactgat ggtgtttaag gtgtagttta
3481 gtgtttgtgc attatgcgtc gtagtgttgt tgttctttgg actttttcga acaatactgg
3541 gcattatagc ccacctgtgt atatgccgct agagtatgct agccgtgtga caaaccagaa
3601 gcaactagtg tttacgcatc ccaaggatc
//