GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS HUMHOX51 6305 bp ds-DNA PRI 22-MAY-1991 DEFINITION Human HOX 5.1 gene for HOX 5.1 protein ACCESSION X17360 KEYWORDS DNA-binding protein; Hox 5.1 gene; homeo box. SOURCE Homo sapiens DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 6305) AUTHORS Cianetti,L. JOURNAL Unpublished (1989) STANDARD full automatic REFERENCE 2 (sites) AUTHORS Cianetti,L., Di,C.A., Zappavigna,V., Bottero,L., Boccoli,G., Testa,U., Russo,G., Boncinelli,E. and Peschle,C. TITLE Molecular mechanisms underlying the expression of the human HOX-5.1 gene JOURNAL Nucleic Acids Res. 18, 4361-4368 (1990) STANDARD full staff_review COMMENT SWISS-PROT; P09016; HM51$HUMAN. *source: developmental stage=adult; clone=lambda 13G. **map: chromosome=chromosome 2; map position=2q31->37. See also <X04706> (HSHOM4) for HHo.c13 clone. From EMBL 26 entry HSHOX51; dated 12-MAR-1991. FEATURES Location/Qualifiers promoter 347..350 /note="TATA box" precursor_RNA 376..6053 /note="primary transcript" mRNA 376..2051 /note="exon 1" CDS 1619..2051 /note="HOX 5.1 protein (AA 1 - 144) (2051 is 1st base in codon)" /codon_start=1619 intron 2052..2592 /note="intron I" mRNA 2593..6053 /note="exon 2" CDS 2593..2924 /note="HOX 5.1 protein (AA 145 - 255) (2593 is 2nd base in codon)" /codon_start=2593 misc_feature 2619..2801 /note="homeobox" misc_feature 3192..3197 /note="polyA signal" misc_feature 5971..5976 /note="polyA signal" misc_feature 6039..6044 /note="polyA signal" BASE COUNT 1587 a 1433 c 1686 g 1599 t ORIGIN 1 ggatcctggt gggggagggt ggttaataaa gccgccatcc ttgggatgga ttatttttct 61 ttctttcttt ctttttttct ttcttaagaa gaatattctg gttgttcgcc tgcttggtaa 121 ccctgaccct ggcagaagaa tgagggaact cattgcttca aattgtcgcc aagcccatta 181 ggctacctga actgtctcag aaagtgcggg tggctgcgtc gaacggtggt ggctcagagg 241 aagagattgg ggccggcagc gacctaggta cctcactctg ggtgggaccc agaggttgta 301 acgttgtcta tatataccct gtagaaccga atttgtgtgg tatccgtata gtcacagatt 361 cgattctagg ggaatatatg gtcgatgcaa aaacttcacg tttcttcgga atagccagag 421 accaaagtgc gacatggaga ctagaagcag ccggcgctgg tcagccgcct cgttctgttt 481 tattaccttg gactccagga ggatcagctg cgcctggtga catagagcag cttttcctct 541 ccagaagctc ctcaccttta aacagagtat cctctgggtg ctgaaaagaa agaaagacag 601 aaagagagaa agagagagag agagagaaag agagaatgca agcctaattg gttgcatgga 661 tgcagggcca aagggctagg ttttggggta ctagggagtg aggtacaagg ccagcttgcc 721 cagtcccagc tctgccctcc aggaacatga ggtgcaaagg tacccaaatg ggggcttgct 781 tgtatttggg gcctgtggga agaaagcaag cttcaaagaa gcccagtggg gagctctagg 841 gtgcattttg acaaggtgga ggtgcccttg ccaccatccc agcccacccc cagctacatg 901 ggcaagggca gcgagggccc cctgctattt tggcagggcc cagctttggc tgggaacccc 961 cgggcctggg cactggtaga aagcatggcg gttactcatt gcctaatttg attcaagctg 1021 gccagattct ggtaactttt gggtgaccct gatgaagaca aagccaggac ggcggccttt 1081 gtatggcaga tccctgctcc cgccggctgc aggcagggcg ggcaggcagg aaccctcctc 1141 gcctggggca ctctgcccaa ctcagaggcg agttcaccca cccacctttc attgctctgt 1201 accccaatag gaggattcat tctcccttga gctgtgccta cttggtgtcg gggggcgggg 1261 gttgcattca gctgggggtg agtggaaggg ccacggaagg ttggcaaaat cagtggcaga 1321 caaaagctgg gattacctga ggggaatggg gtgctgggga ctggaactac attaatatct 1381 ggcaggggct ctcaaatgtg ccatagcaag ctacttgatt acacgtatgt tatttagtta 1441 aatttgtgaa aattatgaga tgctcaccaa cccggtgata aacttgctcc ctcgccattg 1501 gctggcctgg tcacatggct gcccaacttt attcagttga cagcaagtag gagggcccta 1561 tggaaggaga aaaaaagaca acacgagaaa aattagtatt ttctaccttc tgaaattaat 1621 ggtcatgagt tcgtatatgg tgaactccaa gtatgtggac cccaagttcc ctccgtgcga 1681 ggagtatttg cagggcggct acctaggcga gcagggcgcc gactactacg gcggcggcgc 1741 gcagggcgca gacttccagc ccccggggct ctacccacgg cccgacttcg gtgagcagcc 1801 tttcggaggc agcggccccg ggcctggctc ggcgctgcct gcgcggggtc acggacaaga 1861 gccaggcggc cccggcggtc actacgccgc tccaggagag ccttgcccag ctcccccggc 1921 gcctccgccg gcgcccctgc ctggcgcccg ggcctacagt cagtccgacc ccaagcagcc 1981 gccccccggg acggcactca agcagccggc cgtggtctac ccctggatga agaaggtgca 2041 cgtgaattcg ggtaaggcta gggtccagta acctttctgt ccacatccca gcccgttagc 2101 ctgggtcctc tggaaggggg tgcgagtagg tgggggcgtg tggagcttcc atgggcgccg 2161 caattactct ccccataaat ttttatagct gagggagcag gtcaggacca tgtggctggc 2221 tgctcggctg tgggcgcaaa agggggtggg gatggggggg tgggggagga ctccattttc 2281 agagcagggg gaaggctgtg gaggagcggg ggatttccaa aatgcttgag ggttccggac 2341 ctggtggtgg gcccagaaga aggagcacat ttggggatcc cgcaagcctg gggtatgtgg 2401 gtgtgtttga ggaggtgggt gggagtgagc gtgtgcgccg gggagagggc gggagggagg 2461 aagcaagcga gcttgggagc gcgcggggag ggccgcgggc ctcggggcgc gccaggaagt 2521 gagcggcgga ggcgaggggc ctaactagtg gccgggcgct gacctgcctg tcctgtctgt 2581 tttgtctcgc agtgaacccc aactacaccg gtggggaacc caagcggtcc cgaacggcct 2641 acacccggca gcaagtccta gaactggaaa aagaatttca ttttaacagg tatctgacaa 2701 ggcgccgtcg gattgaaatc gctcacaccc tgtgtctgtc ggagcgccag atcaagatct 2761 ggttccagaa ccggaggatg aagtggaaaa aagatcataa gctgcccaac actaaaggca 2821 ggtcatcgtc ctcatcttcc tcctcatctt gctcctcctc agtcgccccc agccagcatt 2881 tacagccgat ggccaaagac caccacacgg acctgacgac cttatagaag tggggaccct 2941 gggcccatct ctccctgcgc accaggctga gccgaagctg cggggcaggc cgggcctgct 3001 gtcacctcgc tgggctctaa ggtactgtgg ggtggacctg ggacaagcag gccgccctcg 3061 gactaggtta gcatcctgcc cgagggcagc cccctcccta gagcgggatg gggatgggag 3121 ggggggcggg attctctctc taagtatatt atatggcagg agctactgag aacataaaat 3181 cttggcgagt cattaaactt atgaaaatca ccgctcttgg attttgaatt tgcaaatgaa 3241 ggttggatgc tttatcccac tgtgaatttg gacattctcc cccactccac ccctccaggg 3301 tgctttgtgg cttaataatg tgggggagtt gaggcagaag gttggccacc cctgtgctag 3361 gtgctttcag tggaagccag agagctgggt caggatttct ggactttctg ggttgtctat 3421 ggaatttcat gtgattaaaa aatatatatt ttgctcccag tggccccacc tccaaagaaa 3481 tgggtctaag aaggaagtaa aaatgggtta ttttatgttt agatatttgc ttaaatattt 3541 atttgttggg aaatgtggta cagaaataac tgacaccttc atgccaaaaa tcttaaaaag 3601 gtgaaagggg ctgaacttca gggagcagaa tcagagatat gtgcacttac ttctgaactc 3661 cacccctccc cactctctgg aaatgtatat aggggggcct taacccttcc agaaggaagc 3721 aaaggattca ctcaaagttg cattcttgaa aatatatttc cacatgtgtt tttttcagca 3781 ctgtgcttac aaccagttct gggtgattaa aggaaaggga aaaaaaccaa caaatggtcc 3841 aacattttcc ttctggggaa agaaaacaaa acctctatgc actgggtcat tagataatga 3901 ctgaattttc tgttccaact ggattccaaa tgccctaaat accctcatat agcagtgttt 3961 tacaggaatt agtgtatggc ccgtgtaggg gaggggctgt gcagtgggga gaaagtggga 4021 aggtgaggaa ctcttgcttt aagaaggaaa aaaaaaaaac cctaattgaa tctagaagtc 4081 cacaaaagtt agccttagag tttttttccc cctgaagttt taattttttt aaaaaccaaa 4141 tctaaggaag ttttcctcag ctcattaatt agaagcagaa tttgtaaaag tataaaagtt 4201 ttcaagcact cgtctttgcc ttgagaatag tggtttttta aagaatcact ctcaacaggg 4261 gagatgtcct ctagtcgttt ttcttctgcc tctcctggga agggttcaaa gttcattttt 4321 ctaaaatgct gaccctcaag cataaggagg aagaagtcaa agttaatggc cagagttcat 4381 atactcagat gaaaccagtc ttcccaaggc ctcaggctcc aaaaaaggtt gtagctatca 4441 aaaagtgacc aaagtgggaa agggagaaag gataagctta aaatttaatt ttaagatcca 4501 gaaggggggt atttttttca gtacttcaaa aacactttag aaggtttctg ttgtaattta 4561 aaaaatatat ttaagtggga gggaaaaaag agtttctctg taggcttgtt ctttggctgt 4621 gtctcctgag agctgagggc aggtattcac tgcagtccct aggctgaaat tccgcttctc 4681 tgaagtgtct tccaagcctt ggtcttttgt attagaccct ggggactgct ctttgtttct 4741 ccttggggtg agcctggctc tcagacttgc acatggcaat acttgaatgt caccacgtcg 4801 ggatattaaa gatggatatt cgtgcattat tcacatcatt gtttctatga caaaaagcac 4861 agagttcata catagtcaag acgtcttttt ctgacgccct cacgttgaga agctgaaaag 4921 gtattttacc gaagttcggg taaattacag aatcaggttc atccagagga caaattttct 4981 atttgattag ctgtatttca gccgggagga ctgacctcta aacccctaac cttttggact 5041 ctaactaccc ttctcttctt ttttcctctc taacatggag agcagtcttt ggatgtacca 5101 tttgaaagga gccgctatcc ttaggcaagt tggaaagttg ctaagctgct ttcctaaaac 5161 ccaaatctgt ctatacattg aaccttctct ttgagaaggg gaaaaaggta tatattttca 5221 caacatccaa ttacatatat ataatagaga tttgttgtat agattttccc ccacctcaga 5281 agttcaggtt actcaccccc agtttcatac caaatgccac acaggcttaa ctgactgcat 5341 ccctgcccca gaggaaagcc aagaaacatg ttttcatgag gaaaacccaa gctccttctc 5401 aaacatagcc ccactacttt ggaaagtaac ttaatcagag aaacaacttc tttgtttata 5461 agtctcagct ctccttctca gcttggaggg attcttttga aatgttaatg gagcctggat 5521 ggcccagagt gcagccccca accctgaggt cccagtcgga ccccagcatc catttgggcc 5581 cacaggagtg ggccagggaa ggggtagggc cccgtaacca cttagggcag ggaaggaaat 5641 gggtttccat ctgagaacgt gctttggaga aagctaggtg tggaaaagct ccaatgccca 5701 tttgctatta tttgtttcca gtttgttcct ttaaatatga gccagaagtg tttgtgttgg 5761 tgttttaaaa acaaaaacaa aaaccgtgtt ggggtcctga ctgggggagg gggagagtga 5821 agtgtttgct gaggacattg ctcctctgac tcccatctca ctttgtccat cgcagccttt 5881 tgttgggaga tgacactgtc agtcagccca tgatgtctgt tcacacgaga tgctttttta 5941 atagaattga ccaatgtttt gctgccactg attaaagtat tatttatact aattgttgct 6001 tgtagttttg atgtaattca ttgatctata tttaaaataa taaaaggtgt agcaaaatct 6061 ccctcctgtt tggtgcctta acagaagcat tcatcctttg ttaagtcttc taaaagctaa 6121 catttaacat aaacaagtta ttattttctg caataaatta ggcaccattt tttggggggt 6181 gcctaaagtg tgaaggttaa accatgtaag gcttagcaat tctattatta ccacctcctt 6241 aatgtacaca cactcccagt tggccaccat attttgtgag cattgggaag cctggggttg 6301 aattc //