GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS SOYSC514 5663 bp ds-DNA PLN 22-MAY-1991
DEFINITION Soybean sc514 gene for lipoxygenase.
ACCESSION X56139
KEYWORDS lipoxygenase.
SOURCE Glycine max DNA.
ORGANISM Glycine max
Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida;
Rosidae; Rosales; Fabaceaea.
REFERENCE 1 (bases 1 to 5663)
AUTHORS Shibata,D.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 5663)
AUTHORS Shibata,D., Kato,T. and Tanaka,K.
TITLE Nucleotide sequence of a soybean lipoxygenase gene and the short
intergenic region between an upstream lipoxygenase gene
JOURNAL Plant Mol. Biol. 16, 353-359 (1991)
STANDARD full automatic
COMMENT *source: library=genomic, lambda-charon4; clone=lambda-SG14,
*source: lambda-SG19a3;
From EMBL 26 entry GMSC514; dated 12-MAR-1991.
FEATURES Location/Qualifiers
mat_peptide join(1111..1342,1967..2253,2328..2562,2869..3189,
3290..3375,3506..3613,3818..4125,4244..4507,4710..5460)
/EC_number="1.13.11.12"
/product="lipoxygenase"
/gene="sc514"
mRNA join(1036..1342,1967..2253,2328..2562,2869..3189,
3290..3375,3506..3613,3818..4125,4244..4507,4710..>5463)
/gene="sc514"
CDS join(1111..1342,1967..2253,2328..2562,2869..3189,
3290..3375,3506..3613,3818..4125,4244..4507,4710..5463)
/EC_number="1.13.11.12"
/product="lipoxygenase"
/gene="sc514"
/codon_start=1111
CDS <1..26
/note="upstream reading frame"
/codon_start=1
TATA_signal 1011..1018
exon 1036..1342
/number=1
exon 1036..1342
prim_transcript 1036..5663
/gene="sc514"
intron 1343..1966
/number=1
exon 1967..2253
/number=2
exon 1967..2253
exon 1967..2253
exon 1967..2253
intron 2254..2327
/number=2
exon 2328..2562
/number=3
exon 2328..2562
exon 2328..2562
exon 2328..2562
intron 2563..2868
/number=3
exon 2869..3189
/number=4
exon 2869..3189
exon 2869..3189
exon 2869..3189
intron 3190..3289
/number=4
exon 3290..3375
/number=5
exon 3290..3375
exon 3290..3375
exon 3290..3375
intron 3376..3505
/number=5
exon 3506..3613
/number=6
exon 3506..3613
exon 3506..3613
exon 3506..3613
intron 3614..3817
/number=6
exon 3818..4125
/number=7
exon 3818..4125
exon 3818..4125
exon 3818..4125
intron 4126..4243
/number=7
exon 4244..4507
/number=8
exon 4244..4507
exon 4244..4507
exon 4244..4507
intron 4508..4709
/number=8
exon 4710..5663
/number=9
BASE COUNT 1828 a 944 c 1002 g 1889 t
ORIGIN
1 gaattcccaa cagtatctcc atctaaaatg tgtgtgtggt ttgcttatct attgtgcttt
61 tgaataaaat agacaatact tgtctatggt tattattggc tgtatgtctg tatttggatg
121 ctctcgatcg gtttgcaagt aataagagtg ttttcactgt cacgttgtat ttcgatcatc
181 ttaattatgt ttactagtaa taatgtggaa gctgtacgtt tgttaattct aggttaaata
241 atagagcaat tgtttttgaa gtatttgaga attgttaagg tctcttcact agatcactat
301 gaaatccttt ctcaccacta ccatgattta tgaccaagtc cttcaactat gtcacatgct
361 tacctttctt gtgagtcgta gtctagctac atgacacaat tcttagggac catattcttg
421 atatcacttc tctgactcat aaacaaagat aatatatata tatatatata tatatatatg
481 atcagttttt ttattgatct acaatatcca tctcaatatt ttaaatatat cattgcttca
541 catattccac tgatttccaa agaagtcaat gtagaatgac aatgtgaaaa tcatttttta
601 tactagtgaa tcagtatttc atgtttcttt agaaagataa tttttttata aatagttatt
661 aaatgattta tttttattta ataattttat aataaatatt tttttatttt cttaattggt
721 agcatattca tataattaaa aatagaaaag ataatccgga acgtccaaac tcaattaaaa
781 agaaacataa attattattt aaaacataaa ccatattttt aaaaaaaacc taacccaatg
841 ccactgtgta tataagaaca gaagaaatcg aaaagaatca atttgaatat aattaagtat
901 gcatagaacg tgttgcatat gggggaggag gtgcccatag aaaaatgaat taaccggtgg
961 agctcatatt aaaaaaatga tgtttatact ttctcccttc tcaagtcctc tataaatacc
1021 aaaatattct tggcttcctc acaccacaag cttctccttc ttttgggaaa agattaacaa
1081 taaaagtgtg gagtactgtt gatagcaaag atgtttggga tcttcgacaa ggggcaaaag
1141 ataaagggga cagtggtgtt gatgccaaag aatgtgttgg acttcaacgc cataacctcc
1201 atcggtaaag gtggtgttat tgacacagcc accggcatct taggccaagg cgtcagctta
1261 gttggtggag taattgatac tgccacttcc ttcttaggcc gtaatatctc catgcaattg
1321 atcagtgcta ctcagactga tggtttgttc actctcatcc ttcaaactct tttctgtaat
1381 aacattacat tatattaata attgttttca ataattcaaa tttaatagtt atgcacttac
1441 tgaccccact gtgtaaatta tttcatttac aaattatatt tggtatgact tttgacataa
1501 taataattac aaaattatca tttttgtatt ttgatcacag tataaaacaa gtctcgtata
1561 attatactaa agattgtagt accaaaatta gactcttaat aattaatact accgctgaca
1621 catcccatgc atccagctct agttattctt gaaatatgca aggccaaggc caaggagtca
1681 cttacctaac tttaccttgt atctcttagg ctttgaatat atttttctta gataagataa
1741 caaaaaatat tattttgatg aagttaactt tacaaaggaa gaaaaaataa ataaaaaatt
1801 cattataaga attaaattca caatttacgt tccaacatta aatccactac acaaccaggc
1861 tgatgcaagt atcacttttt acagattatt ggtcgatcac aatctcacaa actcatcact
1921 tataactatt ttttttatga attgttgttt tgtatggttt ttgcaggcag tggaaatggg
1981 aaagttggaa aagaagtcta tttggaaaaa catcttccga ccttgccaac gttgggagca
2041 aggcaggatg cgttcagtat tttctttgaa tgggatgcta gttttggaat tccaggagca
2101 ttttacatca aaaactttat gactgatgag tttttcctcg tcagtgttaa actcgaggac
2161 attccaaacc atggaaccat tgaatttgtt tgcaactcat gggtttacaa cttcaggagt
2221 tacaaaaaga atcgcatttt ctttgtcaat gatgtaagct tctttgtttt tttcaattat
2281 ggtcccaatc aattttgttt tcattcttta aatgaaatat attgtagaca tatcttccaa
2341 gtgccacacc agctccacta cttaagtaca gaaaagaaga attggaggtt ttaagaggag
2401 atggaacagg gaagagaaag gactttgaca gaatctatga ttatgatgtc tataatgatt
2461 tgggcaatcc agatggtggt gatcctcgcc caatccttgg tgggtctagc atctatccct
2521 accctcgcag ggttagaaca ggaagagaaa ggaccaggac aggttagact tttatttttt
2581 gtcttatgta ttcaattatc atgttagtat tataaaaagg taaccaataa ataatattac
2641 attcgatttc tttaaataaa attttgattt taaccttgta aatgagaaaa aagtaattta
2701 aaatgaaaga tctgtcagtg aattttccaa taaactgtaa tcaacaatat caatatgcga
2761 tgtgattgta gaatggtatg atataattgt gttgagaata tatatctaat aataccattt
2821 ccaatgatac aaaaaatatt tatttgatta ttgtttgagc ggtaacagat cccaacagtg
2881 agaaaccggg cgaggtttat gttccaagag atgaaaattt tggtcacttg aagtcatcgg
2941 atttccttac atacggaatc aaatccttat ctcacgatgt gatacctttg ttcaaatctg
3001 caatttttca attaagggtc acatcgagtg agtttgaaag cttcgaagat gtgcgtagtc
3061 tctatgaggg tggaattaaa ttgccaacag atatactgag ccaaattagc cccttaccag
3121 ccctcaagga aatcttccgc actgatggtg aaaatgttct tcaatttcca ccacctcatg
3181 tagccaaagg taccttagtt acctatatta atcaaaacaa cttaaatata ttagcatttg
3241 ttgaattaaa taatcgatcc gatttgacaa ttaattatga tttgagcagt tagtaagtct
3301 gggtggatga ctgatgagga atttgctaga gaggtgattg ccggtgtaaa cccaaatgtg
3361 atccgtcgtc ttcaagtaag tccgaatgct ttttttatta ttaagtcttt aaaatggtga
3421 atttttatgt caatgttaaa ttgttttatg gccaaactaa caaagactca ctatctttcc
3481 tcatatcatt cttcaataat gtcaggaatt cccaccaaag agcacacttg atcccacact
3541 ctatggtgat caaaccagta ccataacaaa agaacaattg gagattaaca tgggaggggt
3601 cacagtagaa gaggtaatga tatatatata tatatattaa cagtaaaata tcattgaatt
3661 tctatctttt tgctatgtta tcttacaatt tctttttaat aattttctaa tacaaaataa
3721 aaaatgagtt acacttgatt aatatataaa aaaaaaagtc aatcttttga aattcgaagc
3781 tatgaaacag tgtctgaaat taaattttgc ggaacaggca cttagtactc agagattatt
3841 catattagat taccaagatg cattcatccc atatttgacg aggataaaca gcctacctac
3901 tgcaaaagct tatgccacaa ggacaatcct gttcttgaaa gatgatggta ctttgaagcc
3961 acttgctatt gaattaagca aaccacatcc agatggagat aatttgggtc ctgagagtat
4021 agtggtgttg cctgcaactg aaggtgttga tagtacaatt tggctattgg ccaaggctca
4081 tgttattgtg aatgactctg gttatcatca gctcgtgagc cattggtaat tgaacttctc
4141 tagcaatatt tagtcatgtc ttgtaaaatg aaaaaataaa gtccatgtat agcgtgtgtg
4201 agtatgagtt tatcattgac cttttttttt gttggggtta caggttaaat actcatgcag
4261 tgatggaacc atttgccata gcaaccaata ggcatctcag tgtgctccac cctatttata
4321 aacttcttta tcctcactac cgcgacacca taaatatcaa tggacttgct aggcagtccc
4381 tgattaatgc agatggcatt atagagaaat catttttgcc cggaaagtac tccattgaga
4441 tgtcttcatc cgtctacaag aattgggttt tcactgacca agcattacca gctgatctcg
4501 tcaagaggta tttattgtaa aagtcaacca ttggtctgaa atattgtttt ttcttagtag
4561 tacatagtag taattaagat actgtaaaaa tcaaccaact tatcatacat attaatttgt
4621 gattagatga tactactatg ctatttttac tcttgaaaga tattgaggtt tggaatgtgt
4681 ttttattttt gttttggggc ttgattcaga ggattggcaa ttgaagatcc ctctgcaccc
4741 catggccttc gccttgtgat agaggactac ccttatgctg ttgatggact tgaaatatgg
4801 gatgctatta agacatgggt tcatgaatat gtctccttgt attacccaac agatgcagca
4861 gttcaacaag atactgaact acaagcatgg tggaaggaag ctgtggagaa gggtcatggt
4921 gacttaaaag aaaagccttg gtggcctaaa atgcagacaa ctgaagatct cattcaatca
4981 tgctctatta tcgtttggac agcttcggct ctccatgctg ctgttaattt tggacaatat
5041 ccttatgggg gcttaatcct gaaccgtcca actctagcca gaaggtttat cccagctgaa
5101 ggaaccccag agtatgatga gatggtgaag aatcctcaaa aggcttatct gagaacaatc
5161 acacccaagt ttgagaccct tattgatctt tcagtgatag agatattgtc aaggcatgct
5221 tctgatgaga tataccttgg agagagggag actccaaatt ggactactga taagaaggca
5281 ttagaagctt tcaaaaggtt tggaagcaaa ctgactggaa ttgaaggaaa aatcaatgca
5341 aggaacagtg atccaagtct gagaaaccgg actgggccag ttcagctgcc atacactttg
5401 ctccatcgtt caagtgagga agggttgact ttcaaaggaa ttcccaacag tatctctatc
5461 taattaaaaa gagtttgtgg tttccttatc tatgttgtac ttctgaataa catagacttt
5521 atgcatgtct atgcgtaatt attgcctgaa cttctgcact attgtatttg gatgctctcg
5581 gttttcatat aataaagtgt gttctcactt tcactttgta tttagttcat cttatgttta
5641 ccagtaataa tacagaagcg atc
//