GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS SOYSC514 5663 bp ds-DNA PLN 22-MAY-1991 DEFINITION Soybean sc514 gene for lipoxygenase. ACCESSION X56139 KEYWORDS lipoxygenase. SOURCE Glycine max DNA. ORGANISM Glycine max Eukaryota; Plantae; Embryobionta; Magnoliophyta; Magnoliopsida; Rosidae; Rosales; Fabaceaea. REFERENCE 1 (bases 1 to 5663) AUTHORS Shibata,D. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 5663) AUTHORS Shibata,D., Kato,T. and Tanaka,K. TITLE Nucleotide sequence of a soybean lipoxygenase gene and the short intergenic region between an upstream lipoxygenase gene JOURNAL Plant Mol. Biol. 16, 353-359 (1991) STANDARD full automatic COMMENT *source: library=genomic, lambda-charon4; clone=lambda-SG14, *source: lambda-SG19a3; From EMBL 26 entry GMSC514; dated 12-MAR-1991. FEATURES Location/Qualifiers mat_peptide join(1111..1342,1967..2253,2328..2562,2869..3189, 3290..3375,3506..3613,3818..4125,4244..4507,4710..5460) /EC_number="1.13.11.12" /product="lipoxygenase" /gene="sc514" mRNA join(1036..1342,1967..2253,2328..2562,2869..3189, 3290..3375,3506..3613,3818..4125,4244..4507,4710..>5463) /gene="sc514" CDS join(1111..1342,1967..2253,2328..2562,2869..3189, 3290..3375,3506..3613,3818..4125,4244..4507,4710..5463) /EC_number="1.13.11.12" /product="lipoxygenase" /gene="sc514" /codon_start=1111 CDS <1..26 /note="upstream reading frame" /codon_start=1 TATA_signal 1011..1018 exon 1036..1342 /number=1 exon 1036..1342 prim_transcript 1036..5663 /gene="sc514" intron 1343..1966 /number=1 exon 1967..2253 /number=2 exon 1967..2253 exon 1967..2253 exon 1967..2253 intron 2254..2327 /number=2 exon 2328..2562 /number=3 exon 2328..2562 exon 2328..2562 exon 2328..2562 intron 2563..2868 /number=3 exon 2869..3189 /number=4 exon 2869..3189 exon 2869..3189 exon 2869..3189 intron 3190..3289 /number=4 exon 3290..3375 /number=5 exon 3290..3375 exon 3290..3375 exon 3290..3375 intron 3376..3505 /number=5 exon 3506..3613 /number=6 exon 3506..3613 exon 3506..3613 exon 3506..3613 intron 3614..3817 /number=6 exon 3818..4125 /number=7 exon 3818..4125 exon 3818..4125 exon 3818..4125 intron 4126..4243 /number=7 exon 4244..4507 /number=8 exon 4244..4507 exon 4244..4507 exon 4244..4507 intron 4508..4709 /number=8 exon 4710..5663 /number=9 BASE COUNT 1828 a 944 c 1002 g 1889 t ORIGIN 1 gaattcccaa cagtatctcc atctaaaatg tgtgtgtggt ttgcttatct attgtgcttt 61 tgaataaaat agacaatact tgtctatggt tattattggc tgtatgtctg tatttggatg 121 ctctcgatcg gtttgcaagt aataagagtg ttttcactgt cacgttgtat ttcgatcatc 181 ttaattatgt ttactagtaa taatgtggaa gctgtacgtt tgttaattct aggttaaata 241 atagagcaat tgtttttgaa gtatttgaga attgttaagg tctcttcact agatcactat 301 gaaatccttt ctcaccacta ccatgattta tgaccaagtc cttcaactat gtcacatgct 361 tacctttctt gtgagtcgta gtctagctac atgacacaat tcttagggac catattcttg 421 atatcacttc tctgactcat aaacaaagat aatatatata tatatatata tatatatatg 481 atcagttttt ttattgatct acaatatcca tctcaatatt ttaaatatat cattgcttca 541 catattccac tgatttccaa agaagtcaat gtagaatgac aatgtgaaaa tcatttttta 601 tactagtgaa tcagtatttc atgtttcttt agaaagataa tttttttata aatagttatt 661 aaatgattta tttttattta ataattttat aataaatatt tttttatttt cttaattggt 721 agcatattca tataattaaa aatagaaaag ataatccgga acgtccaaac tcaattaaaa 781 agaaacataa attattattt aaaacataaa ccatattttt aaaaaaaacc taacccaatg 841 ccactgtgta tataagaaca gaagaaatcg aaaagaatca atttgaatat aattaagtat 901 gcatagaacg tgttgcatat gggggaggag gtgcccatag aaaaatgaat taaccggtgg 961 agctcatatt aaaaaaatga tgtttatact ttctcccttc tcaagtcctc tataaatacc 1021 aaaatattct tggcttcctc acaccacaag cttctccttc ttttgggaaa agattaacaa 1081 taaaagtgtg gagtactgtt gatagcaaag atgtttggga tcttcgacaa ggggcaaaag 1141 ataaagggga cagtggtgtt gatgccaaag aatgtgttgg acttcaacgc cataacctcc 1201 atcggtaaag gtggtgttat tgacacagcc accggcatct taggccaagg cgtcagctta 1261 gttggtggag taattgatac tgccacttcc ttcttaggcc gtaatatctc catgcaattg 1321 atcagtgcta ctcagactga tggtttgttc actctcatcc ttcaaactct tttctgtaat 1381 aacattacat tatattaata attgttttca ataattcaaa tttaatagtt atgcacttac 1441 tgaccccact gtgtaaatta tttcatttac aaattatatt tggtatgact tttgacataa 1501 taataattac aaaattatca tttttgtatt ttgatcacag tataaaacaa gtctcgtata 1561 attatactaa agattgtagt accaaaatta gactcttaat aattaatact accgctgaca 1621 catcccatgc atccagctct agttattctt gaaatatgca aggccaaggc caaggagtca 1681 cttacctaac tttaccttgt atctcttagg ctttgaatat atttttctta gataagataa 1741 caaaaaatat tattttgatg aagttaactt tacaaaggaa gaaaaaataa ataaaaaatt 1801 cattataaga attaaattca caatttacgt tccaacatta aatccactac acaaccaggc 1861 tgatgcaagt atcacttttt acagattatt ggtcgatcac aatctcacaa actcatcact 1921 tataactatt ttttttatga attgttgttt tgtatggttt ttgcaggcag tggaaatggg 1981 aaagttggaa aagaagtcta tttggaaaaa catcttccga ccttgccaac gttgggagca 2041 aggcaggatg cgttcagtat tttctttgaa tgggatgcta gttttggaat tccaggagca 2101 ttttacatca aaaactttat gactgatgag tttttcctcg tcagtgttaa actcgaggac 2161 attccaaacc atggaaccat tgaatttgtt tgcaactcat gggtttacaa cttcaggagt 2221 tacaaaaaga atcgcatttt ctttgtcaat gatgtaagct tctttgtttt tttcaattat 2281 ggtcccaatc aattttgttt tcattcttta aatgaaatat attgtagaca tatcttccaa 2341 gtgccacacc agctccacta cttaagtaca gaaaagaaga attggaggtt ttaagaggag 2401 atggaacagg gaagagaaag gactttgaca gaatctatga ttatgatgtc tataatgatt 2461 tgggcaatcc agatggtggt gatcctcgcc caatccttgg tgggtctagc atctatccct 2521 accctcgcag ggttagaaca ggaagagaaa ggaccaggac aggttagact tttatttttt 2581 gtcttatgta ttcaattatc atgttagtat tataaaaagg taaccaataa ataatattac 2641 attcgatttc tttaaataaa attttgattt taaccttgta aatgagaaaa aagtaattta 2701 aaatgaaaga tctgtcagtg aattttccaa taaactgtaa tcaacaatat caatatgcga 2761 tgtgattgta gaatggtatg atataattgt gttgagaata tatatctaat aataccattt 2821 ccaatgatac aaaaaatatt tatttgatta ttgtttgagc ggtaacagat cccaacagtg 2881 agaaaccggg cgaggtttat gttccaagag atgaaaattt tggtcacttg aagtcatcgg 2941 atttccttac atacggaatc aaatccttat ctcacgatgt gatacctttg ttcaaatctg 3001 caatttttca attaagggtc acatcgagtg agtttgaaag cttcgaagat gtgcgtagtc 3061 tctatgaggg tggaattaaa ttgccaacag atatactgag ccaaattagc cccttaccag 3121 ccctcaagga aatcttccgc actgatggtg aaaatgttct tcaatttcca ccacctcatg 3181 tagccaaagg taccttagtt acctatatta atcaaaacaa cttaaatata ttagcatttg 3241 ttgaattaaa taatcgatcc gatttgacaa ttaattatga tttgagcagt tagtaagtct 3301 gggtggatga ctgatgagga atttgctaga gaggtgattg ccggtgtaaa cccaaatgtg 3361 atccgtcgtc ttcaagtaag tccgaatgct ttttttatta ttaagtcttt aaaatggtga 3421 atttttatgt caatgttaaa ttgttttatg gccaaactaa caaagactca ctatctttcc 3481 tcatatcatt cttcaataat gtcaggaatt cccaccaaag agcacacttg atcccacact 3541 ctatggtgat caaaccagta ccataacaaa agaacaattg gagattaaca tgggaggggt 3601 cacagtagaa gaggtaatga tatatatata tatatattaa cagtaaaata tcattgaatt 3661 tctatctttt tgctatgtta tcttacaatt tctttttaat aattttctaa tacaaaataa 3721 aaaatgagtt acacttgatt aatatataaa aaaaaaagtc aatcttttga aattcgaagc 3781 tatgaaacag tgtctgaaat taaattttgc ggaacaggca cttagtactc agagattatt 3841 catattagat taccaagatg cattcatccc atatttgacg aggataaaca gcctacctac 3901 tgcaaaagct tatgccacaa ggacaatcct gttcttgaaa gatgatggta ctttgaagcc 3961 acttgctatt gaattaagca aaccacatcc agatggagat aatttgggtc ctgagagtat 4021 agtggtgttg cctgcaactg aaggtgttga tagtacaatt tggctattgg ccaaggctca 4081 tgttattgtg aatgactctg gttatcatca gctcgtgagc cattggtaat tgaacttctc 4141 tagcaatatt tagtcatgtc ttgtaaaatg aaaaaataaa gtccatgtat agcgtgtgtg 4201 agtatgagtt tatcattgac cttttttttt gttggggtta caggttaaat actcatgcag 4261 tgatggaacc atttgccata gcaaccaata ggcatctcag tgtgctccac cctatttata 4321 aacttcttta tcctcactac cgcgacacca taaatatcaa tggacttgct aggcagtccc 4381 tgattaatgc agatggcatt atagagaaat catttttgcc cggaaagtac tccattgaga 4441 tgtcttcatc cgtctacaag aattgggttt tcactgacca agcattacca gctgatctcg 4501 tcaagaggta tttattgtaa aagtcaacca ttggtctgaa atattgtttt ttcttagtag 4561 tacatagtag taattaagat actgtaaaaa tcaaccaact tatcatacat attaatttgt 4621 gattagatga tactactatg ctatttttac tcttgaaaga tattgaggtt tggaatgtgt 4681 ttttattttt gttttggggc ttgattcaga ggattggcaa ttgaagatcc ctctgcaccc 4741 catggccttc gccttgtgat agaggactac ccttatgctg ttgatggact tgaaatatgg 4801 gatgctatta agacatgggt tcatgaatat gtctccttgt attacccaac agatgcagca 4861 gttcaacaag atactgaact acaagcatgg tggaaggaag ctgtggagaa gggtcatggt 4921 gacttaaaag aaaagccttg gtggcctaaa atgcagacaa ctgaagatct cattcaatca 4981 tgctctatta tcgtttggac agcttcggct ctccatgctg ctgttaattt tggacaatat 5041 ccttatgggg gcttaatcct gaaccgtcca actctagcca gaaggtttat cccagctgaa 5101 ggaaccccag agtatgatga gatggtgaag aatcctcaaa aggcttatct gagaacaatc 5161 acacccaagt ttgagaccct tattgatctt tcagtgatag agatattgtc aaggcatgct 5221 tctgatgaga tataccttgg agagagggag actccaaatt ggactactga taagaaggca 5281 ttagaagctt tcaaaaggtt tggaagcaaa ctgactggaa ttgaaggaaa aatcaatgca 5341 aggaacagtg atccaagtct gagaaaccgg actgggccag ttcagctgcc atacactttg 5401 ctccatcgtt caagtgagga agggttgact ttcaaaggaa ttcccaacag tatctctatc 5461 taattaaaaa gagtttgtgg tttccttatc tatgttgtac ttctgaataa catagacttt 5521 atgcatgtct atgcgtaatt attgcctgaa cttctgcact attgtatttg gatgctctcg 5581 gttttcatat aataaagtgt gttctcactt tcactttgta tttagttcat cttatgttta 5641 ccagtaataa tacagaagcg atc //