GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS MUSIIG 9658 bp ds-DNA ROD 22-MAY-1991 DEFINITION Murine I gene for MHC class II(Ia) associated invariant chain ACCESSION X13414 KEYWORDS I gene; invariant chain; major histocompatibility complex. SOURCE Mus musculus DNA. ORGANISM Mus musculus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae. REFERENCE 1 (bases 1 to 9658) AUTHORS Jones,P.P. JOURNAL Unpublished (1988) STANDARD full automatic REFERENCE 2 (bases 1 to 9658) AUTHORS Zhu,L. and Jones,P.P. TITLE Complete sequence of the murine invariant chain (Ii) gene JOURNAL Nucleic Acids Res. 17, 447-448 (1989) STANDARD full automatic COMMENT *source: subspecies=domesticus; strain=AKR; tissue=liver; haplotype=k; library=cosmid; **map: chromosomal location=chromosome 18; From EMBL 26 entry MMIIG; dated 11-MAR-1991. FEATURES Location/Qualifiers CAAT_signal 757..761 TATA_signal 817..821 prim_transcript 845..9649 /gene="Ii" polyA_signal 9607..9612 BASE COUNT 2436 a 2483 c 2398 g 2341 t ORIGIN 1 agatctttct ggctaggtcc cagtgtaggc acagatatgg atgatgaaat cttgtcaaca 61 cagtgaaatc tctatggcgc ccttttccag cctctatttc ctcactccct gtcatactga 121 cactacacag tctgagccct gggaagcaga agagaatggc taaaaatctg ggctccaacc 181 atctctgctt gcatgtatga gcctgggcac acgcagcctc tctctctaca ccacagtgtg 241 agcctgggca cacacagcct ctctacacca gtttccactt gaaacacggg agaaggcaca 301 ctcctctgag acactgtaaa gatcctataa agcatgacca gttatgattt gatcacagtt 361 agtctatgat gataagtgtc agcacaaggg ccttcacaca cgaacactgt gtagatagga 421 gcatagggga catcagacca gagagagggg gacttgtcta agcctctttc atccttcatt 481 tattcataga tgaggggtag tgggggtggg ggtgggtaga caaaggcact ttctgcttca 541 aaaataattc cttccctggg gaatgtgcct gcttctagaa ccgtccaaag agcctgatga 601 atccagaagt ctgcctagaa acaagtgatg atagccctgg cagccaatgg gatcatgcag 661 gcctttctac ctgtttaggg aactccccct tcatcctgcc cagggaggca gctttgagtg 721 agtggggaat ttccagattt gtggctttca gttccacatc taccatgtgg gcggagtgac 781 ctgctgtggg cgaatcagat tccttccagt atcagcttta agaggtgatc ttggggctca 841 agggtcccag acacacagca gcagcagcag cagcagcagc agcaacagca gcagcagcag 901 cagcgcctgt gggaaaaact agaggctaga gccatggatg accaacgcga cctcatctct 961 aaccatgaac agttgcccat actgggaaac cgccctagag agccagaaag gtatgtgtga 1021 ataccagcag agagccctta cctctggagg acacagaatg caggcctggg gagggacaca 1081 gagagctctg ttgcaggaag gttgccttga gtgaccttga gcgctgattt tctgaggaat 1141 tttatttatt tatttattta tttatttatt tatttattta ttttgagata gggttcctct 1201 atatcaaaat atagagaatg ccggggattc tacataatga aacataatga aactcatttt 1261 atagaccagg ctggcttgaa ctacctgcct cttcctccca agagcctggg atcagaggca 1321 agtgttacca catttggctc tgagtaatct tgccctcctc ccctccaacc tgccaagggt 1381 actgacttcc cctctgtaaa ccaagggcct cctttaggac ttgtgttaag agagccctgg 1441 atttgagttt caccatacaa gtaagggctt tcacagatcc tctgaagctg ggccataact 1501 ctaggtcaga agacttaaga ccatagtgtt cccccttgaa tctgttctcc cttgtcttca 1561 gtaagtctgt ttgatttcct agcctctaat ctggaaaagg gttccatgcc aacagcctca 1621 gaacccattt ctgaggacag tagaagtgac tctcatgtct tccttaattg ctagagaggt 1681 atgagccagg aagagggctc acagaccgag tcacactgac acggatgagc ctttctgtat 1741 gtgtgtaggg agagtgtgat caaaagattg ctcacagaga tggagttcct ggcccattgt 1801 tacatgttgc atagctatcc agatagctgg gctcctctcg cggtccctaa atgacctcag 1861 ccttacactc ctaacccccc cccccaaaaa aaaaccaaac agggttagaa tttgcttgcc 1921 ttcttgcctt gttcccccaa cccccaagct gcctatttgc ttgcctatgg ggaactaaaa 1981 ccagatgtga cgtcagcagt ctccaggcag aaagaggctt tgaaagagac tctgggagac 2041 tgaccacgaa tggcattcta gcaagaaggt aaccagatat ggattcctag agcaaccggg 2101 aattctgaag taacttttac tgctgtcatg ggtgaccaca gaaaaaccac agcctctttt 2161 ttgggtccca ctgcttaaca gcaatggcta taagaactgt tcatctattg ggttccttct 2221 accggtcctc agacgacatt gatcatcacg ataatgataa acaaactaca gattctatct 2281 taattcctac agttactgta gctaggagtt gggcattttt gttatctccc tctgcctgtg 2341 cctttttttt taaggctagt tttactatgt agttgggctg gaattcacgg agtagaccaa 2401 gctacttggc cttgagctaa gagaaactta acttctcctg agtgttggga ttaaaagtgt 2461 gtgccactat ggctggcatt attattacac agaaggaatt tgagctcatc tagtaattaa 2521 cttccaggtt atctcagctg ctgagtgttg ggcatagcat ttgagtcagg accagtctga 2581 gtcctgtctg ggtcctgtag aggcctcatt tgtggagcga ggaggtagga gccctctgac 2641 ctcaggcctc tcattgaggg ctgtgtattc aacaaatcca tgacaatctt cactttactt 2701 cagttactgc ttccaagact gaccaggcct taaggtccag ggccattccc tacaggttgg 2761 atttgagggg cattttggtg aacacttctg cctggcaaca tgtgcgtcat gattcctgac 2821 ggctctggtt ggtttctgac ttaagtcaat tttttttttt ttaaacacaa ggaggaagta 2881 caaaggagga agtaaaacca ggaggtggca agagttggca ttcaatcaga accaagaccc 2941 agccaaccta gaggcagtaa gaggctgggt gtggttgtgt atgcctagaa tccagcattt 3001 gggaggtgga gccaggagga tcaggggttc aaggccagac tcatctacat gagaccatct 3061 cagaaaaaca aaataatatt aaattgaata aaagtggaag gagagatgat gctgggcttg 3121 acatccagcc tcctggagcg cagcattgtt atggatagtg accttcctga gagcagtatt 3181 actggtagag gaaatgtgtg tccggtgtgg ggccaagttg ttttcatctc ttcgttattt 3241 atgtttcatc tcttcgttat ttaacaaccg ctcattccaa gccctaacca ggtccacacg 3301 cagaagtgtc ttgttcctgg ccccagagtt aggcaagcca ggatgccagt tatggtactg 3361 ttcacatctt caatacaaac ctgtgttcac tggccttctg aaaggttgaa gttcgtaaag 3421 gagagggact tggctaccca agctcatgtg gtagcaggta gagctgggac tagatctgaa 3481 tatggggtgg tagaggggtt cgggggttcc atgagtcacc aaagtagatg aagcagaaga 3541 ccttgagccc aggttccatc ttccttcaga aggccaagaa atttaaacct attctccctc 3601 ctgtctgatc tcctttctcc agcccttggc ttaggaaata cagagggttg gcaagccaat 3661 gagaattagc tgtgtctgtg atgtcataag ttaccaggca gacaggtttt ctggagtttc 3721 ctaaattacc cttcctggtt gctggagtag gcaggatcga aacttatcac gagcaatttc 3781 aatttcaatg tagctgctct tacttagctc tgagctctgc gtactatact agcaaggcca 3841 cagatgggtc attatataaa taataataaa tctggcagat ttagccggac gtgctggcac 3901 acgcctttaa tcccaggcac tcggaggcag aggcaggcag atttctgagt tcgaggccag 3961 gcctggtcta caaagtgagt tccaggacag gccagggata taccccctac atacacacca 4021 cacaccactc atgcacacac cacaccacac cacaccacac cacaccatac acaaacacca 4081 cacacaccac atatacacat acacatgcac agcacacatg agtatacacg cacacacaca 4141 cttgttggag gacagccaaa ttttaacact gtgggtttga gggttgctca catgacatat 4201 gagagagctg ggagactggg gaagaagatc tgtggagcta agccccccct cggaagtggg 4261 gaagggggat ttgatcttgt ttttgctggc agaaaaagat aggtgagttt actatgtaag 4321 aggaagaagg gttttcatcc actgtgccgt ccccaatccc cacggtgacg tcaggtttaa 4381 agagaaaagg gaaggaagtg cggtagggga cagcaaaagc cggatttata cctgaaaaga 4441 gaagtggggg cctagagttt ttacatgtgg agcgggagga acattgtcag gctgaagcag 4501 tgccagcagt gtgtgtgtac acacacacac acacacacac acacacacac atctccaaga 4561 caaccccctc acccccaccc ctgctccaga gtccatctgt cccagagtcc ctggaaatct 4621 gaatagatct ccagggtaga ggggactcgg gactcgggag gactttaccc tgtcactaca 4681 cagaggagac accaaagccc agaggaggca aggaacgtgg ctcatccttc ccattgagct 4741 tgggccccag gtggatcttc ctgggaggac acttgggggc ggcaggagca gatgtcctca 4801 cttattggga gggtttgagt ctgagagggc gtgggtccac ttccaatcag cgtccagctc 4861 tggagcatgc tcttactccg tcccaacagg tgcagccgtg gagctctgta caccggtgtc 4921 tctgtcctgg tggctctgct cttggctggg caggccacca ctgcttactt cctgtaccag 4981 caacagggcc gcctagacaa gctgaccatc acctcccaga acctgcaact ggagagcctt 5041 cgcatgaagc ttccgaaatg tgcgtgctcc acctgtccct cacctcacag acatcatttc 5101 tccatttagc cccctcccga tctcccttcc tcccccgcac cggtttttca aaatcttaac 5161 ccctgggttc cttactccca aggacctgga ctcatactgt cctccctgcc ccacagctgc 5221 caaacctgtg agccagatgc ggatggctac tcccttgctg atgcgtccaa tgtccatgga 5281 taacatgctc cttggggtaa ggaaggcggc aggaaggaaa tggtagctgg tgtttgccaa 5341 gcgggggggg gggctgaagg atacagttgt caaggaatct gggcacttaa ctactggccg 5401 aggagcaggg cacacctaga gaggcttgcc caaggtgact tgaggaggcc agaactctta 5461 gggctccctg gtggaaaggc atccacaatt tgcaaagtgc ttcttcacct tagcttccta 5521 tagtccccca cttcctccaa gtctttggct gcaaaaatgg ctgttactca taagattact 5581 attggtacct tatccagggc agagcacatc aatcgaacgg tgccaaatgg tcagtcctga 5641 aaacatacat aagttagcat gatacagacg gggcaggttt aattaggact agtggtgtat 5701 atatatatag acatataata tatgcaagca atgacaatga atgaaaaaag aggccatgaa 5761 tttgaagtga agcaggaagg aacatatggg agggcttggg aggaggaagc caactctgct 5821 attgggaagg ctctgacaag cttttgcccg cctgaccaga gagggcatag aggcaggaag 5881 ggcgtgaggg gctggcactt ccatgttagg aggtggcaga tttgagctgt tgagtgcaag 5941 cacctgactc gtactagact atagctgctg atccctgcaa tgctggtaac cctgttccct 6001 tccccacagc ctgtgaagaa cgttaccaag tacggcaaca tgacccagga ccatgtgatg 6061 catctgctca cggtgagtat cagagccagc ggtagtctcc tgggtcacgt gggacccggc 6121 cctcactcat gggttaggct cactataaac tcaacacatg cttagtccca aggaatacag 6181 gttggtcctt aactgttgcg tacagtccat cccctaccca ctttgagata agagtctatg 6241 tagtcctggg aaccgactat gtagaacaag ttggctttga actcacaatt tggccttcct 6301 ctggctccca gtgctaggat taaaggcgtg catcactagg ccaggttcca gccacctcac 6361 ttttgaggag ttaaaaatta tggtccattg agactggaga gatggctcag aggttaagag 6421 caccacctac tcttccagag gtcctgagtt caattcccaa ccctcatggt ggctcgcaac 6481 catctgtaat ggggatccga tgtcctcttc tggtgtgtct gaagacagag acagtgtgct 6541 cgcatacatg aaataataaa taaatctttt aaaaaaatca aattaaggtc caatggattg 6601 acttggccac aataccatgt tctccttccc aaattaatat tgcacatgct tgcttcgtgt 6661 caggcacagt gcatggcatg gctcttggct acagcaggga acactggttg tgtgaggaca 6721 ggcagaggac ccagacagag gggaaaaaac tggagagggt gcctgggttc gagctcctga 6781 ccctgactgg agttccatag ctgggtgccc ctcacgtgct ctccacatgg ggaccagggg 6841 ccaggcttgg tgtggcctaa tctgccgatt cctagacgag ctggaactgg ttgcacatct 6901 ccccgataat aaccgaggga cactataact tcccccattg ccctggccgc tctggcagag 6961 gtctggaccc ctggagtacc cgcagctgaa ggggaccttc ccagagaatc tgaagcatct 7021 taagaactcc atggatggcg tgaactggaa ggtaaacagc ccctgttgga atctcttctt 7081 cttcccacag tagcttcagg actagaaaga ggcaaaggga ggactagggc tgctgttctc 7141 ttgaagctac tgagggcctt ctaacattca cgacaccctg tgggtcttta agaggcactg 7201 aggctgaagc tggacccctc caagtttgta gtcaaggcag agtccagaag ggtaggcggt 7261 tgactcctga ccctgaccat ccacctctga tctcgttaga tcttcgagag ctggatgaag 7321 cagtggctct tgtttgagat gagcaagaac tccctggagg agaagaagcc caccgaggct 7381 ccacctaaag gtaccaggac gggagcttcg gcctgcctgt cacagtgacc tactctctca 7441 gctcagtctt ttctcgcctg ttccttcagg gttcggaaac ccttatatcc tatccgtggg 7501 tctgttcttt cacacacatg tccagagtac agaggcctct aggctctctg tcttggagca 7561 aaaccaactc aaaacgtacc cggcaggagt ccccccagca gtacataaac atacaaggag 7621 gagacggaat cagcacttgt ccagatagag ccctgggcac ctctcacttc acggagtgcc 7681 agcatacagg aggctgaggc ataaagcatt ggggaacgcc tctgctttac cttggtgctg 7741 cctctaactt gctgtgcagt gctggacgag cccatcccac tggcttctgt gtcccaacaa 7801 gtggaaggct agaggcccat actgctctgg acctcagttt ctctgatata taaatccctt 7861 acatgctatc tcaaccagct tctagctaat gtttgaatcc cctctccagc gtccccaaca 7921 agtggcagcc cccatttcta ctttatccca gtaaaggaag gtcagattcc cagaggtgtc 7981 cccattactg tccccctgaa accagaatca aactgtaaca aaatccagaa taattattca 8041 ctggggcaaa tgacacctat aagtcatgct ttctcttttt ggatcttact ggtttcagac 8101 tcaggcctca gttttctcat ctaggctatg ggtctacccc ataaggaaag caatttggat 8161 aggcattaag cccatggcag tggtgtgtgt gtgtgtgtgg gtctctgctc tgctgagatc 8221 ctggcccaga gtccaccact cactgtcttc atcatgcctt cagtactgac caagtgccag 8281 gaagaagtca gccacatccc tgccgtctac ccgggtgcgt tccgtcccaa gtgcgacgag 8341 aacggtaact atttgccact ccagtgccac gggagcactg gctactgctg gtgtgtgttc 8401 ccccaacggc actgaggttc ctcacaccaa gagccgcggg cgccataact gcagtggtaa 8461 gcaggggaca ccgtgtcaca taatctaaag gactaggaag ctctaggaag gccaagggtc 8521 caaaggtccc tcccagtata catggggtca ggacatgggt ggctgtgccc tgggagcatc 8581 caccatcagt cacacacaca caccagcccc tttctccaca caggaactcc ttgtgtcctt 8641 ctaatctttg tctcttcttc tccgcacgct gtcctgcact ggagtcccac agacccaccc 8701 gtctcactgt atccccaacc acactgtatg ctctggtgcc tcctttgcca agttcaaggc 8761 acagtggcaa cattgtgtgt gtgtgtgtgt gttggggtaa gaataacagt tgagcctgat 8821 gcttcccttg cagagccact ggacatggaa gacctatctt ctggcctggg agtgaccagg 8881 caggaactgg gtcaaggtaa gggggggatc acagagaggg gccacccaca tgcagactct 8941 ggtgacactg ggacattcat cactatcact gggatggttt ttccagaatg ggatggtggc 9001 tgggagcaca gtactacctg agcttagcag ggggacagac tgatctgcag ttccaagatg 9061 ttgggcagag gaggcaggga caacaaaact ggtggcccag ctgtatcaac ctgtgcttct 9121 cttcccagtc accctgtgaa gacagaggcc agctctgcac agcagcagcg ccccctgctc 9181 tcctgtgcct cagcccttct tatgttccct gatgtcacac cccacttccc gtctccctgc 9241 accctggggc ttgagactgg tgtctgtttc atcgtcccag gacacggcaa atgaagtcag 9301 aacagaagga ggacgctgga gggccttgct ggtaccgcta tctaaaggga acccccattt 9361 ctgacccatt agtagtcttg aatgtggggc tctgagataa aggcccgcag acagggacaa 9421 gggatgccct acccttaacc taggctggac acatttgctg ccttctcctc aaggaagaag 9481 aacccaagcc cctcctccca gtaacccctc ctcacatcct gccacccccc ctcaagcccc 9541 accccctttc aggttccttg ctcagccaag cttgtcagca gcctgtagga tcatggttca 9601 agtgacaata aaggaagaaa gtagaacact cttgcttctg cctcttcagt tgggatcc //