GenBank-Updates@genbank.bio.net (05/22/91)
LOCUS MUSIIG 9658 bp ds-DNA ROD 22-MAY-1991
DEFINITION Murine I gene for MHC class II(Ia) associated invariant chain
ACCESSION X13414
KEYWORDS I gene; invariant chain; major histocompatibility complex.
SOURCE Mus musculus DNA.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 9658)
AUTHORS Jones,P.P.
JOURNAL Unpublished (1988)
STANDARD full automatic
REFERENCE 2 (bases 1 to 9658)
AUTHORS Zhu,L. and Jones,P.P.
TITLE Complete sequence of the murine invariant chain (Ii) gene
JOURNAL Nucleic Acids Res. 17, 447-448 (1989)
STANDARD full automatic
COMMENT *source: subspecies=domesticus; strain=AKR; tissue=liver;
haplotype=k; library=cosmid; **map: chromosomal location=chromosome
18;
From EMBL 26 entry MMIIG; dated 11-MAR-1991.
FEATURES Location/Qualifiers
CAAT_signal 757..761
TATA_signal 817..821
prim_transcript 845..9649
/gene="Ii"
polyA_signal 9607..9612
BASE COUNT 2436 a 2483 c 2398 g 2341 t
ORIGIN
1 agatctttct ggctaggtcc cagtgtaggc acagatatgg atgatgaaat cttgtcaaca
61 cagtgaaatc tctatggcgc ccttttccag cctctatttc ctcactccct gtcatactga
121 cactacacag tctgagccct gggaagcaga agagaatggc taaaaatctg ggctccaacc
181 atctctgctt gcatgtatga gcctgggcac acgcagcctc tctctctaca ccacagtgtg
241 agcctgggca cacacagcct ctctacacca gtttccactt gaaacacggg agaaggcaca
301 ctcctctgag acactgtaaa gatcctataa agcatgacca gttatgattt gatcacagtt
361 agtctatgat gataagtgtc agcacaaggg ccttcacaca cgaacactgt gtagatagga
421 gcatagggga catcagacca gagagagggg gacttgtcta agcctctttc atccttcatt
481 tattcataga tgaggggtag tgggggtggg ggtgggtaga caaaggcact ttctgcttca
541 aaaataattc cttccctggg gaatgtgcct gcttctagaa ccgtccaaag agcctgatga
601 atccagaagt ctgcctagaa acaagtgatg atagccctgg cagccaatgg gatcatgcag
661 gcctttctac ctgtttaggg aactccccct tcatcctgcc cagggaggca gctttgagtg
721 agtggggaat ttccagattt gtggctttca gttccacatc taccatgtgg gcggagtgac
781 ctgctgtggg cgaatcagat tccttccagt atcagcttta agaggtgatc ttggggctca
841 agggtcccag acacacagca gcagcagcag cagcagcagc agcaacagca gcagcagcag
901 cagcgcctgt gggaaaaact agaggctaga gccatggatg accaacgcga cctcatctct
961 aaccatgaac agttgcccat actgggaaac cgccctagag agccagaaag gtatgtgtga
1021 ataccagcag agagccctta cctctggagg acacagaatg caggcctggg gagggacaca
1081 gagagctctg ttgcaggaag gttgccttga gtgaccttga gcgctgattt tctgaggaat
1141 tttatttatt tatttattta tttatttatt tatttattta ttttgagata gggttcctct
1201 atatcaaaat atagagaatg ccggggattc tacataatga aacataatga aactcatttt
1261 atagaccagg ctggcttgaa ctacctgcct cttcctccca agagcctggg atcagaggca
1321 agtgttacca catttggctc tgagtaatct tgccctcctc ccctccaacc tgccaagggt
1381 actgacttcc cctctgtaaa ccaagggcct cctttaggac ttgtgttaag agagccctgg
1441 atttgagttt caccatacaa gtaagggctt tcacagatcc tctgaagctg ggccataact
1501 ctaggtcaga agacttaaga ccatagtgtt cccccttgaa tctgttctcc cttgtcttca
1561 gtaagtctgt ttgatttcct agcctctaat ctggaaaagg gttccatgcc aacagcctca
1621 gaacccattt ctgaggacag tagaagtgac tctcatgtct tccttaattg ctagagaggt
1681 atgagccagg aagagggctc acagaccgag tcacactgac acggatgagc ctttctgtat
1741 gtgtgtaggg agagtgtgat caaaagattg ctcacagaga tggagttcct ggcccattgt
1801 tacatgttgc atagctatcc agatagctgg gctcctctcg cggtccctaa atgacctcag
1861 ccttacactc ctaacccccc cccccaaaaa aaaaccaaac agggttagaa tttgcttgcc
1921 ttcttgcctt gttcccccaa cccccaagct gcctatttgc ttgcctatgg ggaactaaaa
1981 ccagatgtga cgtcagcagt ctccaggcag aaagaggctt tgaaagagac tctgggagac
2041 tgaccacgaa tggcattcta gcaagaaggt aaccagatat ggattcctag agcaaccggg
2101 aattctgaag taacttttac tgctgtcatg ggtgaccaca gaaaaaccac agcctctttt
2161 ttgggtccca ctgcttaaca gcaatggcta taagaactgt tcatctattg ggttccttct
2221 accggtcctc agacgacatt gatcatcacg ataatgataa acaaactaca gattctatct
2281 taattcctac agttactgta gctaggagtt gggcattttt gttatctccc tctgcctgtg
2341 cctttttttt taaggctagt tttactatgt agttgggctg gaattcacgg agtagaccaa
2401 gctacttggc cttgagctaa gagaaactta acttctcctg agtgttggga ttaaaagtgt
2461 gtgccactat ggctggcatt attattacac agaaggaatt tgagctcatc tagtaattaa
2521 cttccaggtt atctcagctg ctgagtgttg ggcatagcat ttgagtcagg accagtctga
2581 gtcctgtctg ggtcctgtag aggcctcatt tgtggagcga ggaggtagga gccctctgac
2641 ctcaggcctc tcattgaggg ctgtgtattc aacaaatcca tgacaatctt cactttactt
2701 cagttactgc ttccaagact gaccaggcct taaggtccag ggccattccc tacaggttgg
2761 atttgagggg cattttggtg aacacttctg cctggcaaca tgtgcgtcat gattcctgac
2821 ggctctggtt ggtttctgac ttaagtcaat tttttttttt ttaaacacaa ggaggaagta
2881 caaaggagga agtaaaacca ggaggtggca agagttggca ttcaatcaga accaagaccc
2941 agccaaccta gaggcagtaa gaggctgggt gtggttgtgt atgcctagaa tccagcattt
3001 gggaggtgga gccaggagga tcaggggttc aaggccagac tcatctacat gagaccatct
3061 cagaaaaaca aaataatatt aaattgaata aaagtggaag gagagatgat gctgggcttg
3121 acatccagcc tcctggagcg cagcattgtt atggatagtg accttcctga gagcagtatt
3181 actggtagag gaaatgtgtg tccggtgtgg ggccaagttg ttttcatctc ttcgttattt
3241 atgtttcatc tcttcgttat ttaacaaccg ctcattccaa gccctaacca ggtccacacg
3301 cagaagtgtc ttgttcctgg ccccagagtt aggcaagcca ggatgccagt tatggtactg
3361 ttcacatctt caatacaaac ctgtgttcac tggccttctg aaaggttgaa gttcgtaaag
3421 gagagggact tggctaccca agctcatgtg gtagcaggta gagctgggac tagatctgaa
3481 tatggggtgg tagaggggtt cgggggttcc atgagtcacc aaagtagatg aagcagaaga
3541 ccttgagccc aggttccatc ttccttcaga aggccaagaa atttaaacct attctccctc
3601 ctgtctgatc tcctttctcc agcccttggc ttaggaaata cagagggttg gcaagccaat
3661 gagaattagc tgtgtctgtg atgtcataag ttaccaggca gacaggtttt ctggagtttc
3721 ctaaattacc cttcctggtt gctggagtag gcaggatcga aacttatcac gagcaatttc
3781 aatttcaatg tagctgctct tacttagctc tgagctctgc gtactatact agcaaggcca
3841 cagatgggtc attatataaa taataataaa tctggcagat ttagccggac gtgctggcac
3901 acgcctttaa tcccaggcac tcggaggcag aggcaggcag atttctgagt tcgaggccag
3961 gcctggtcta caaagtgagt tccaggacag gccagggata taccccctac atacacacca
4021 cacaccactc atgcacacac cacaccacac cacaccacac cacaccatac acaaacacca
4081 cacacaccac atatacacat acacatgcac agcacacatg agtatacacg cacacacaca
4141 cttgttggag gacagccaaa ttttaacact gtgggtttga gggttgctca catgacatat
4201 gagagagctg ggagactggg gaagaagatc tgtggagcta agccccccct cggaagtggg
4261 gaagggggat ttgatcttgt ttttgctggc agaaaaagat aggtgagttt actatgtaag
4321 aggaagaagg gttttcatcc actgtgccgt ccccaatccc cacggtgacg tcaggtttaa
4381 agagaaaagg gaaggaagtg cggtagggga cagcaaaagc cggatttata cctgaaaaga
4441 gaagtggggg cctagagttt ttacatgtgg agcgggagga acattgtcag gctgaagcag
4501 tgccagcagt gtgtgtgtac acacacacac acacacacac acacacacac atctccaaga
4561 caaccccctc acccccaccc ctgctccaga gtccatctgt cccagagtcc ctggaaatct
4621 gaatagatct ccagggtaga ggggactcgg gactcgggag gactttaccc tgtcactaca
4681 cagaggagac accaaagccc agaggaggca aggaacgtgg ctcatccttc ccattgagct
4741 tgggccccag gtggatcttc ctgggaggac acttgggggc ggcaggagca gatgtcctca
4801 cttattggga gggtttgagt ctgagagggc gtgggtccac ttccaatcag cgtccagctc
4861 tggagcatgc tcttactccg tcccaacagg tgcagccgtg gagctctgta caccggtgtc
4921 tctgtcctgg tggctctgct cttggctggg caggccacca ctgcttactt cctgtaccag
4981 caacagggcc gcctagacaa gctgaccatc acctcccaga acctgcaact ggagagcctt
5041 cgcatgaagc ttccgaaatg tgcgtgctcc acctgtccct cacctcacag acatcatttc
5101 tccatttagc cccctcccga tctcccttcc tcccccgcac cggtttttca aaatcttaac
5161 ccctgggttc cttactccca aggacctgga ctcatactgt cctccctgcc ccacagctgc
5221 caaacctgtg agccagatgc ggatggctac tcccttgctg atgcgtccaa tgtccatgga
5281 taacatgctc cttggggtaa ggaaggcggc aggaaggaaa tggtagctgg tgtttgccaa
5341 gcgggggggg gggctgaagg atacagttgt caaggaatct gggcacttaa ctactggccg
5401 aggagcaggg cacacctaga gaggcttgcc caaggtgact tgaggaggcc agaactctta
5461 gggctccctg gtggaaaggc atccacaatt tgcaaagtgc ttcttcacct tagcttccta
5521 tagtccccca cttcctccaa gtctttggct gcaaaaatgg ctgttactca taagattact
5581 attggtacct tatccagggc agagcacatc aatcgaacgg tgccaaatgg tcagtcctga
5641 aaacatacat aagttagcat gatacagacg gggcaggttt aattaggact agtggtgtat
5701 atatatatag acatataata tatgcaagca atgacaatga atgaaaaaag aggccatgaa
5761 tttgaagtga agcaggaagg aacatatggg agggcttggg aggaggaagc caactctgct
5821 attgggaagg ctctgacaag cttttgcccg cctgaccaga gagggcatag aggcaggaag
5881 ggcgtgaggg gctggcactt ccatgttagg aggtggcaga tttgagctgt tgagtgcaag
5941 cacctgactc gtactagact atagctgctg atccctgcaa tgctggtaac cctgttccct
6001 tccccacagc ctgtgaagaa cgttaccaag tacggcaaca tgacccagga ccatgtgatg
6061 catctgctca cggtgagtat cagagccagc ggtagtctcc tgggtcacgt gggacccggc
6121 cctcactcat gggttaggct cactataaac tcaacacatg cttagtccca aggaatacag
6181 gttggtcctt aactgttgcg tacagtccat cccctaccca ctttgagata agagtctatg
6241 tagtcctggg aaccgactat gtagaacaag ttggctttga actcacaatt tggccttcct
6301 ctggctccca gtgctaggat taaaggcgtg catcactagg ccaggttcca gccacctcac
6361 ttttgaggag ttaaaaatta tggtccattg agactggaga gatggctcag aggttaagag
6421 caccacctac tcttccagag gtcctgagtt caattcccaa ccctcatggt ggctcgcaac
6481 catctgtaat ggggatccga tgtcctcttc tggtgtgtct gaagacagag acagtgtgct
6541 cgcatacatg aaataataaa taaatctttt aaaaaaatca aattaaggtc caatggattg
6601 acttggccac aataccatgt tctccttccc aaattaatat tgcacatgct tgcttcgtgt
6661 caggcacagt gcatggcatg gctcttggct acagcaggga acactggttg tgtgaggaca
6721 ggcagaggac ccagacagag gggaaaaaac tggagagggt gcctgggttc gagctcctga
6781 ccctgactgg agttccatag ctgggtgccc ctcacgtgct ctccacatgg ggaccagggg
6841 ccaggcttgg tgtggcctaa tctgccgatt cctagacgag ctggaactgg ttgcacatct
6901 ccccgataat aaccgaggga cactataact tcccccattg ccctggccgc tctggcagag
6961 gtctggaccc ctggagtacc cgcagctgaa ggggaccttc ccagagaatc tgaagcatct
7021 taagaactcc atggatggcg tgaactggaa ggtaaacagc ccctgttgga atctcttctt
7081 cttcccacag tagcttcagg actagaaaga ggcaaaggga ggactagggc tgctgttctc
7141 ttgaagctac tgagggcctt ctaacattca cgacaccctg tgggtcttta agaggcactg
7201 aggctgaagc tggacccctc caagtttgta gtcaaggcag agtccagaag ggtaggcggt
7261 tgactcctga ccctgaccat ccacctctga tctcgttaga tcttcgagag ctggatgaag
7321 cagtggctct tgtttgagat gagcaagaac tccctggagg agaagaagcc caccgaggct
7381 ccacctaaag gtaccaggac gggagcttcg gcctgcctgt cacagtgacc tactctctca
7441 gctcagtctt ttctcgcctg ttccttcagg gttcggaaac ccttatatcc tatccgtggg
7501 tctgttcttt cacacacatg tccagagtac agaggcctct aggctctctg tcttggagca
7561 aaaccaactc aaaacgtacc cggcaggagt ccccccagca gtacataaac atacaaggag
7621 gagacggaat cagcacttgt ccagatagag ccctgggcac ctctcacttc acggagtgcc
7681 agcatacagg aggctgaggc ataaagcatt ggggaacgcc tctgctttac cttggtgctg
7741 cctctaactt gctgtgcagt gctggacgag cccatcccac tggcttctgt gtcccaacaa
7801 gtggaaggct agaggcccat actgctctgg acctcagttt ctctgatata taaatccctt
7861 acatgctatc tcaaccagct tctagctaat gtttgaatcc cctctccagc gtccccaaca
7921 agtggcagcc cccatttcta ctttatccca gtaaaggaag gtcagattcc cagaggtgtc
7981 cccattactg tccccctgaa accagaatca aactgtaaca aaatccagaa taattattca
8041 ctggggcaaa tgacacctat aagtcatgct ttctcttttt ggatcttact ggtttcagac
8101 tcaggcctca gttttctcat ctaggctatg ggtctacccc ataaggaaag caatttggat
8161 aggcattaag cccatggcag tggtgtgtgt gtgtgtgtgg gtctctgctc tgctgagatc
8221 ctggcccaga gtccaccact cactgtcttc atcatgcctt cagtactgac caagtgccag
8281 gaagaagtca gccacatccc tgccgtctac ccgggtgcgt tccgtcccaa gtgcgacgag
8341 aacggtaact atttgccact ccagtgccac gggagcactg gctactgctg gtgtgtgttc
8401 ccccaacggc actgaggttc ctcacaccaa gagccgcggg cgccataact gcagtggtaa
8461 gcaggggaca ccgtgtcaca taatctaaag gactaggaag ctctaggaag gccaagggtc
8521 caaaggtccc tcccagtata catggggtca ggacatgggt ggctgtgccc tgggagcatc
8581 caccatcagt cacacacaca caccagcccc tttctccaca caggaactcc ttgtgtcctt
8641 ctaatctttg tctcttcttc tccgcacgct gtcctgcact ggagtcccac agacccaccc
8701 gtctcactgt atccccaacc acactgtatg ctctggtgcc tcctttgcca agttcaaggc
8761 acagtggcaa cattgtgtgt gtgtgtgtgt gttggggtaa gaataacagt tgagcctgat
8821 gcttcccttg cagagccact ggacatggaa gacctatctt ctggcctggg agtgaccagg
8881 caggaactgg gtcaaggtaa gggggggatc acagagaggg gccacccaca tgcagactct
8941 ggtgacactg ggacattcat cactatcact gggatggttt ttccagaatg ggatggtggc
9001 tgggagcaca gtactacctg agcttagcag ggggacagac tgatctgcag ttccaagatg
9061 ttgggcagag gaggcaggga caacaaaact ggtggcccag ctgtatcaac ctgtgcttct
9121 cttcccagtc accctgtgaa gacagaggcc agctctgcac agcagcagcg ccccctgctc
9181 tcctgtgcct cagcccttct tatgttccct gatgtcacac cccacttccc gtctccctgc
9241 accctggggc ttgagactgg tgtctgtttc atcgtcccag gacacggcaa atgaagtcag
9301 aacagaagga ggacgctgga gggccttgct ggtaccgcta tctaaaggga acccccattt
9361 ctgacccatt agtagtcttg aatgtggggc tctgagataa aggcccgcag acagggacaa
9421 gggatgccct acccttaacc taggctggac acatttgctg ccttctcctc aaggaagaag
9481 aacccaagcc cctcctccca gtaacccctc ctcacatcct gccacccccc ctcaagcccc
9541 accccctttc aggttccttg ctcagccaag cttgtcagca gcctgtagga tcatggttca
9601 agtgacaata aaggaagaaa gtagaacact cttgcttctg cctcttcagt tgggatcc
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